FFCP PHASE1:Hg19::chr2:21233338..21233346,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=603|TSSclassifier=S|UniProt=P04114|association_with_transcript=8bp_to_M18471_5end|coexpression_cluster_id=C5|description=CAGE_peak_37_at_APOB_5end|id=chr2:21233338..21233346,-|ontology_enrichment_celltype=CL:0000181!2.15e-35!12;CL:0000417!2.15e-35!12;CL:0000668!2.15e-35!12;CL:0000414!2.15e-35!12;CL:0000412!2.15e-35!12;CL:0000182!2.15e-35!12;CL:0000223!4.62e-15!59;CL:0002563!2.21e-12!4;CL:0002253!4.98e-07!2|ontology_enrichment_celltype_v019=CL:0000182;1.49e-49;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.43e-49,12;CL:0000223,3.54e-10,58|ontology_enrichment_development_v019=UBERON:0004161;1.71e-24;11!UBERON:0009497;8.54e-21;13!UBERON:0001041;3.33e-09;30!UBERON:0003104;7.67e-09;31!CL:0000223;9.62e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.57e-30!19;UBERON:0006925!4.57e-30!19;UBERON:0008836!4.57e-30!19;UBERON:0008835!6.69e-26!22;UBERON:0003894!6.69e-26!22;UBERON:0009854!9.40e-25!23;UBERON:0007499!9.87e-23!25;UBERON:0009497!9.87e-23!25;UBERON:0000015!9.87e-23!25;UBERON:0002423!9.87e-23!25;UBERON:0006235!9.87e-23!25;UBERON:0004161!9.87e-23!25;UBERON:0005057!7.73e-22!26;UBERON:0009856!7.73e-22!26;UBERON:0003929!1.78e-20!54;UBERON:0002365!3.15e-18!31;UBERON:0002330!3.15e-18!31;UBERON:0002368!4.42e-16!35;UBERON:0004921!7.29e-16!129;UBERON:0004185!7.29e-16!129;UBERON:0000160!1.39e-14!27;UBERON:0005911!4.60e-13!82;UBERON:0001007!6.54e-13!155;UBERON:0001555!6.54e-13!155;UBERON:0007026!6.54e-13!155;UBERON:0001242!2.21e-12!4;UBERON:0001262!2.21e-12!4;UBERON:0004786!2.21e-12!4;UBERON:0004808!2.21e-12!4;UBERON:0001277!2.21e-12!4;UBERON:0000949!2.25e-12!45;UBERON:0002530!5.34e-12!59;UBERON:0004119!1.08e-11!169;UBERON:0000925!1.08e-11!169;UBERON:0006595!1.08e-11!169;UBERON:0005409!2.85e-11!35;UBERON:0003350!4.32e-10!5;UBERON:0005172!5.20e-10!55;UBERON:0005173!5.20e-10!55;UBERON:0002417!5.81e-09!61;UBERON:0000916!5.81e-09!61;UBERON:0002108!1.19e-07!14;UBERON:0000490!3.13e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;2.24e-42;19!UBERON:0006925;2.24e-42;19!UBERON:0002423;3.62e-32;25!UBERON:0002108;5.20e-30;4!UBERON:0002365;2.22e-25;31!UBERON:0002330;2.22e-25;31!UBERON:0002368;1.98e-21;33!UBERON:0000949;2.70e-17;43!UBERON:0001007;3.49e-10;81!UBERON:0005172;5.63e-10;52!UBERON:0005173;5.63e-10;52!UBERON:0002530;4.29e-09;57!UBERON:0000160;8.08e-09;17!UBERON:0002417;1.85e-08;58!UBERON:0000916;1.85e-08;58!UBERON:0005409;5.09e-07;22!UBERON:0002114;9.91e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.46e-42,19;UBERON:0006925,2.46e-42,19;UBERON:0008836,2.46e-42,19;UBERON:0008835,1.53e-36,22;UBERON:0003894,1.53e-36,22;UBERON:0009854,6.02e-35,23;UBERON:0007499,3.89e-32,25;UBERON:0009497,3.89e-32,25;UBERON:0000015,3.89e-32,25;UBERON:0002423,3.89e-32,25;UBERON:0006235,3.89e-32,25;UBERON:0004161,3.89e-32,25;UBERON:0009856,6.81e-31,26;UBERON:0002108,3.86e-30,4;UBERON:0002365,7.10e-26,31;UBERON:0002330,7.10e-26,31;UBERON:0002368,6.86e-23,35;UBERON:0000949,9.71e-18,45;UBERON:0003929,9.99e-15,54;UBERON:0005172,9.99e-15,54;UBERON:0005173,9.99e-15,54;UBERON:0002530,1.90e-13,59;UBERON:0002417,3.22e-13,60;UBERON:0000916,3.22e-13,60;UBERON:0004921,3.78e-13,118;UBERON:0001007,1.46e-10,145;UBERON:0001555,1.46e-10,145;UBERON:0007026,1.46e-10,145;UBERON:0005911,1.46e-09,82;UBERON:0004119,1.70e-09,160;UBERON:0000925,1.70e-09,160;UBERON:0006595,1.70e-09,160;UBERON:0001041,5.49e-09,87;UBERON:0000160,7.45e-09,17;UBERON:0011216,5.99e-08,223;UBERON:0005177,1.12e-07,101;UBERON:0009569,7.11e-07,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,6.87979051674338,1.77236972004421,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |||
|TSSclassifier=S | |||
|UniProt=P04114 | |||
|association_with_transcript=8bp_to_M18471_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_37_at_APOB_5end | |||
|id=chr2:21233338..21233346,- | |||
|ontology_enrichment_celltype=CL:0000181!2.15e-35!12;CL:0000417!2.15e-35!12;CL:0000668!2.15e-35!12;CL:0000414!2.15e-35!12;CL:0000412!2.15e-35!12;CL:0000182!2.15e-35!12;CL:0000223!4.62e-15!59;CL:0002563!2.21e-12!4;CL:0002253!4.98e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.49e-49;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.43e-49,12;CL:0000223,3.54e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.71e-24;11!UBERON:0009497;8.54e-21;13!UBERON:0001041;3.33e-09;30!UBERON:0003104;7.67e-09;31!CL:0000223;9.62e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.57e-30!19;UBERON:0006925!4.57e-30!19;UBERON:0008836!4.57e-30!19;UBERON:0008835!6.69e-26!22;UBERON:0003894!6.69e-26!22;UBERON:0009854!9.40e-25!23;UBERON:0007499!9.87e-23!25;UBERON:0009497!9.87e-23!25;UBERON:0000015!9.87e-23!25;UBERON:0002423!9.87e-23!25;UBERON:0006235!9.87e-23!25;UBERON:0004161!9.87e-23!25;UBERON:0005057!7.73e-22!26;UBERON:0009856!7.73e-22!26;UBERON:0003929!1.78e-20!54;UBERON:0002365!3.15e-18!31;UBERON:0002330!3.15e-18!31;UBERON:0002368!4.42e-16!35;UBERON:0004921!7.29e-16!129;UBERON:0004185!7.29e-16!129;UBERON:0000160!1.39e-14!27;UBERON:0005911!4.60e-13!82;UBERON:0001007!6.54e-13!155;UBERON:0001555!6.54e-13!155;UBERON:0007026!6.54e-13!155;UBERON:0001242!2.21e-12!4;UBERON:0001262!2.21e-12!4;UBERON:0004786!2.21e-12!4;UBERON:0004808!2.21e-12!4;UBERON:0001277!2.21e-12!4;UBERON:0000949!2.25e-12!45;UBERON:0002530!5.34e-12!59;UBERON:0004119!1.08e-11!169;UBERON:0000925!1.08e-11!169;UBERON:0006595!1.08e-11!169;UBERON:0005409!2.85e-11!35;UBERON:0003350!4.32e-10!5;UBERON:0005172!5.20e-10!55;UBERON:0005173!5.20e-10!55;UBERON:0002417!5.81e-09!61;UBERON:0000916!5.81e-09!61;UBERON:0002108!1.19e-07!14;UBERON:0000490!3.13e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.24e-42;19!UBERON:0006925;2.24e-42;19!UBERON:0002423;3.62e-32;25!UBERON:0002108;5.20e-30;4!UBERON:0002365;2.22e-25;31!UBERON:0002330;2.22e-25;31!UBERON:0002368;1.98e-21;33!UBERON:0000949;2.70e-17;43!UBERON:0001007;3.49e-10;81!UBERON:0005172;5.63e-10;52!UBERON:0005173;5.63e-10;52!UBERON:0002530;4.29e-09;57!UBERON:0000160;8.08e-09;17!UBERON:0002417;1.85e-08;58!UBERON:0000916;1.85e-08;58!UBERON:0005409;5.09e-07;22!UBERON:0002114;9.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.46e-42,19;UBERON:0006925,2.46e-42,19;UBERON:0008836,2.46e-42,19;UBERON:0008835,1.53e-36,22;UBERON:0003894,1.53e-36,22;UBERON:0009854,6.02e-35,23;UBERON:0007499,3.89e-32,25;UBERON:0009497,3.89e-32,25;UBERON:0000015,3.89e-32,25;UBERON:0002423,3.89e-32,25;UBERON:0006235,3.89e-32,25;UBERON:0004161,3.89e-32,25;UBERON:0009856,6.81e-31,26;UBERON:0002108,3.86e-30,4;UBERON:0002365,7.10e-26,31;UBERON:0002330,7.10e-26,31;UBERON:0002368,6.86e-23,35;UBERON:0000949,9.71e-18,45;UBERON:0003929,9.99e-15,54;UBERON:0005172,9.99e-15,54;UBERON:0005173,9.99e-15,54;UBERON:0002530,1.90e-13,59;UBERON:0002417,3.22e-13,60;UBERON:0000916,3.22e-13,60;UBERON:0004921,3.78e-13,118;UBERON:0001007,1.46e-10,145;UBERON:0001555,1.46e-10,145;UBERON:0007026,1.46e-10,145;UBERON:0005911,1.46e-09,82;UBERON:0004119,1.70e-09,160;UBERON:0000925,1.70e-09,160;UBERON:0006595,1.70e-09,160;UBERON:0001041,5.49e-09,87;UBERON:0000160,7.45e-09,17;UBERON:0011216,5.99e-08,223;UBERON:0005177,1.12e-07,101;UBERON:0009569,7.11e-07,112 | |||
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|short_description=p37@APOB | |||
}} |
Revision as of 16:26, 12 September 2013
Short description: | p37@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_37_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 8bp_to_M18471_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.43e-49 | 12 |
endodermal cell | 3.54e-10 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.