Personal tools

FFCP PHASE1:Mm9::chr10:4795834..4795904,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=64009|HGNC=|MCL_coexpression_id=552|UniProt=Q6ZWR6,Q6ZWR1,Q6ZWR5,Q80T95|association_with_transcript=0bp_to_ENSMUST00000041639,NM_153399,uc007egn.1_5end|description=CAGE_peak_2_at_Syne1_5end|id=chr10:4795834..4795904,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!3.77e-10!114;UBERON:0004111!8.28e-10!122;UBERON:0002346!8.92e-08!71;UBERON:0003075!8.92e-08!71;UBERON:0007284!8.92e-08!71;UBERON:0001049!2.33e-07!52;UBERON:0005068!2.33e-07!52;UBERON:0006241!2.33e-07!52;UBERON:0007135!2.33e-07!52;UBERON:0000073!3.87e-07!75;UBERON:0001016!3.87e-07!75;UBERON:0001017!5.40e-07!73;UBERON:0005743!5.40e-07!73;UBERON:0000955!5.44e-07!50;UBERON:0006238!5.44e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.23e-10,114;UBERON:0004111,5.19e-10,122;UBERON:0000073,2.23e-09,54;UBERON:0001049,2.11e-08,52;UBERON:0005068,2.11e-08,52;UBERON:0006241,2.11e-08,52;UBERON:0007135,2.11e-08,52;UBERON:0002346,2.27e-07,64;UBERON:0003075,2.27e-07,64;UBERON:0007284,2.27e-07,64;UBERON:0001016,2.99e-07,75;UBERON:0001017,4.30e-07,73;UBERON:0010314,4.72e-07,92;UBERON:0002021,6.66e-07,10;UBERON:0000411,6.66e-07,10;UBERON:0001950,6.66e-07,10|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0.999329285446988,0.607425802169478,0,0.946386496074713,0.959801035240171,0.84877930359606,13.6919697143222,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,103.795844422753,51.5681327385708,68.0580867165938,88.8229546926832,88.7959130445979,77.6816564849846,4.53228544712078,4.05507724878058,7.34187008646726,4.69434806608824,0,0.219686182734472,0.388859798148567,2.2397827460058,1.43752564364972,0.167782606057736,0.725362142011344,0.336093799142464,3.08711323243136,1.43266719969378,0.515672092277442,3.03474691289397,4.7609188134483,3.1691570175309,16.6033820713875,3.55717918444456,0,0,0,0.599200221036809,1.53687322128622,0,0.270011876663381,0,9.71213346972932,8.1721360152097,0.61245399607477,0.287536413054709,0,31.9336054898227,25.9205296312931,26.5739302533301,2.76961204233407,1.9212405156506,1.56274011167028,19.5428099300967,23.0732670112989,22.7669389187447,16.4992007865254,13.3829379951157,5.96478226640962,1.51452386666368,3.17400552448499,65.5093744465792,17.2084775396277,0,0.539703191637817,0,0,2.94933282276679,0,0,0,0.845060518660083,0,0,0,0,0,0,1.82694207550496,2.33044095282455,9.35185476108396,1.73485326766136,1.52232739156071,2.7673859670727,3.16517545160507,5.87943535678524,2.01066546127481,0,6.50697106139602,11.4999371753484,1.45590164952668,4.63767188766826,4.363877278217,0,108.036114097261,94.6699114796817,1.02182822083437,0.11981512450592,1.79970819298022,1.01656181658452,43.1397041485889,54.4425717354165,4.90051973240171,28.6810128317256,25.8272611903634,33.8694512632083,31.7992875612805,1.2220723662038,6.09594155989456,1.0108910337347,7.99679052368601,0.390361328888111,0,0.720248519221397,1.65775299619287,2.10913147369116,3.33095672740609,2.24884138943349,25.6116337031625,0.215567992932842,0,0.351902248327898,0,0.278047249225598,1.39300866608867,0.411564272815887,0.398068533636986,0.702213187313235,1.80143534980301,2.55747149456033,0.621377317606506,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.925602677324269,0.697601834251224,2.14618721119695,2.21854150497622,1.6455984991348,3.77585167381919,8.67436262140656,8.62579925809461,8.34290438105992,7.24714661306008,29.4405927989778,2.46971069710283,0.330418782983798,1.58670339998127,0,0.232236671860439,0.515469845288373,1.00841762311671,0.667134131534611,0.760902504450237,2.37264530772256,0.823494773620054,0.754005626400808,1.39269530428806,0.974820435595601,0,1.72910439899755,1.7922714592893,0.189667900953082,0.456994050438915,1.1270773567308,0.814605311381257,0.775809948670503,1.19230893813542,2.78240763346732,3.54264355151045,3.767969468193,5.55287237648102,2.66807364378434,1.83529616287703,0.589676985339609,1.34917267430912,1.42002084971952,4.58236603529592,3.31013607315846,4.60313819921297,4.37765112292595,1.37280706594041,4.31304619582064,4.83783231969054,4.99260276983297,2.02063102357689,1.25578189465339,2.8946611281802,26.0501998134913,0,0.814824882210129,0.169745085775188,0.469380496577004,0.670025029767263,0.952174563544055,2.73187107000918,7.25121662888479,7.0868700687608,7.97273843287435,19.6635977658886,18.6499780415167,25.0242871346015,0,0,0,0.551873492609465,40.4587486769236,30.2406151407884,0,3.53459298086122,0.94652465824877,0.390438744296638,1.72338718186239,0.477937595905104,0.445597348164788,0.849229592366497,0,1.16902343164525,0.790575555893047,99.6096080907602,3.26462195979018,0.890328018336276,0.488660878060728,3.79431282836832,7.96470830039777,0,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,1.81766864738753,1.42598951353889,4.42451461110142,3.16255825724996,4.12542172992747,6.12791290356818,0,0,0.214337035031592,0.354680467284547,0.535106452806212,2.30368628842969,1.522324745573,0.23467170806371,0.21183207086382,1.32317038832977,2.63818004706368,1.45317984026315,0.422190474497091,0.596861720015682,0.984845398470368,3.49777003955821,29.8534736236921,1.36696704638282,2.47664241555867,5.37064129372164,3.01389531207506,1.6403307326523,1.14389086603261,2.03974115992626,1.81936888020755,3.04039942369732,1.90934123603023,0.316335993581135,1.21991680276109,0.756037385752609,1.25452977608681,0.87345025498471,0.404593039154462,3.2234847732881,2.09404753587224,1.29614973291793,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,1.5624526181274,2.41176492179135,2.17425708743405,2.01621004380506,0.316011120628178,0.608175645870493,0.616265742988964,0.77952493786677,0,0.39736270956253,0.480781798079875,0.295379054349154,0.302899349844443,0.381034033274999,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,5.66825959038028,0,0,0,3.86379188064381,1.31377732815827,2.38097111547445,1.50057865355346,2.50786052017682,16.3778034358949,20.714635642823,17.7597609166213,15.4667864109319,28.0883833105963,29.4603619981983,22.2757425076496,19.8141329418657,20.3914084042892,25.3702552758392,0,1.99512436700516,0.682934423016537,0.486213434136588,0.838452650511929,0.919217542250071,2.66696073361938,3.5025959730612,1.60459604795908,2.52697211763797,4.30914809813408,1.32038438970253,2.71560371662659,2.75308155340938,2.01024141344646,2.85776214769844,3.94006708212509,1.54327376370964,2.47251540481984,1.76638704161277,1.02860775715625,3.19456451086807,2.14592570952589,2.61623549938191,2.54095327121393,2.03075058940024,2.37806364734604,3.41990624869196,3.12349461845482,1.12228454331548,2.49133538060766,2.06859412988683,2.04615521584845,2.01417893541756,1.54325288784913,2.49810577937946,2.10538447600868,3.22306581072447,2.48674831689496,2.42650561031467,3.2461496986859|short_description=p2@Syne1}}
|EntrezGene=64009
|HGNC=
|MCL_coexpression_id=552
|UniProt=Q6ZWR6,Q6ZWR1,Q6ZWR5,Q80T95
|association_with_transcript=0bp_to_ENSMUST00000041639,NM_153399,uc007egn.1_5end
|description=CAGE_peak_2_at_Syne1_5end
|id=chr10:4795834..4795904,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!3.77e-10!114;UBERON:0004111!8.28e-10!122;UBERON:0002346!8.92e-08!71;UBERON:0003075!8.92e-08!71;UBERON:0007284!8.92e-08!71;UBERON:0001049!2.33e-07!52;UBERON:0005068!2.33e-07!52;UBERON:0006241!2.33e-07!52;UBERON:0007135!2.33e-07!52;UBERON:0000073!3.87e-07!75;UBERON:0001016!3.87e-07!75;UBERON:0001017!5.40e-07!73;UBERON:0005743!5.40e-07!73;UBERON:0000955!5.44e-07!50;UBERON:0006238!5.44e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.23e-10,114;UBERON:0004111,5.19e-10,122;UBERON:0000073,2.23e-09,54;UBERON:0001049,2.11e-08,52;UBERON:0005068,2.11e-08,52;UBERON:0006241,2.11e-08,52;UBERON:0007135,2.11e-08,52;UBERON:0002346,2.27e-07,64;UBERON:0003075,2.27e-07,64;UBERON:0007284,2.27e-07,64;UBERON:0001016,2.99e-07,75;UBERON:0001017,4.30e-07,73;UBERON:0010314,4.72e-07,92;UBERON:0002021,6.66e-07,10;UBERON:0000411,6.66e-07,10;UBERON:0001950,6.66e-07,10
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0.999329285446988,0.607425802169478,0,0.946386496074713,0.959801035240171,0.84877930359606,13.6919697143222,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,103.795844422753,51.5681327385708,68.0580867165938,88.8229546926832,88.7959130445979,77.6816564849846,4.53228544712078,4.05507724878058,7.34187008646726,4.69434806608824,0,0.219686182734472,0.388859798148567,2.2397827460058,1.43752564364972,0.167782606057736,0.725362142011344,0.336093799142464,3.08711323243136,1.43266719969378,0.515672092277442,3.03474691289397,4.7609188134483,3.1691570175309,16.6033820713875,3.55717918444456,0,0,0,0.599200221036809,1.53687322128622,0,0.270011876663381,0,9.71213346972932,8.1721360152097,0.61245399607477,0.287536413054709,0,31.9336054898227,25.9205296312931,26.5739302533301,2.76961204233407,1.9212405156506,1.56274011167028,19.5428099300967,23.0732670112989,22.7669389187447,16.4992007865254,13.3829379951157,5.96478226640962,1.51452386666368,3.17400552448499,65.5093744465792,17.2084775396277,0,0.539703191637817,0,0,2.94933282276679,0,0,0,0.845060518660083,0,0,0,0,0,0,1.82694207550496,2.33044095282455,9.35185476108396,1.73485326766136,1.52232739156071,2.7673859670727,3.16517545160507,5.87943535678524,2.01066546127481,0,6.50697106139602,11.4999371753484,1.45590164952668,4.63767188766826,4.363877278217,0,108.036114097261,94.6699114796817,1.02182822083437,0.11981512450592,1.79970819298022,1.01656181658452,43.1397041485889,54.4425717354165,4.90051973240171,28.6810128317256,25.8272611903634,33.8694512632083,31.7992875612805,1.2220723662038,6.09594155989456,1.0108910337347,7.99679052368601,0.390361328888111,0,0.720248519221397,1.65775299619287,2.10913147369116,3.33095672740609,2.24884138943349,25.6116337031625,0.215567992932842,0,0.351902248327898,0,0.278047249225598,1.39300866608867,0.411564272815887,0.398068533636986,0.702213187313235,1.80143534980301,2.55747149456033,0.621377317606506,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.925602677324269,0.697601834251224,2.14618721119695,2.21854150497622,1.6455984991348,3.77585167381919,8.67436262140656,8.62579925809461,8.34290438105992,7.24714661306008,29.4405927989778,2.46971069710283,0.330418782983798,1.58670339998127,0,0.232236671860439,0.515469845288373,1.00841762311671,0.667134131534611,0.760902504450237,2.37264530772256,0.823494773620054,0.754005626400808,1.39269530428806,0.974820435595601,0,1.72910439899755,1.7922714592893,0.189667900953082,0.456994050438915,1.1270773567308,0.814605311381257,0.775809948670503,1.19230893813542,2.78240763346732,3.54264355151045,3.767969468193,5.55287237648102,2.66807364378434,1.83529616287703,0.589676985339609,1.34917267430912,1.42002084971952,4.58236603529592,3.31013607315846,4.60313819921297,4.37765112292595,1.37280706594041,4.31304619582064,4.83783231969054,4.99260276983297,2.02063102357689,1.25578189465339,2.8946611281802,26.0501998134913,0,0.814824882210129,0.169745085775188,0.469380496577004,0.670025029767263,0.952174563544055,2.73187107000918,7.25121662888479,7.0868700687608,7.97273843287435,19.6635977658886,18.6499780415167,25.0242871346015,0,0,0,0.551873492609465,40.4587486769236,30.2406151407884,0,3.53459298086122,0.94652465824877,0.390438744296638,1.72338718186239,0.477937595905104,0.445597348164788,0.849229592366497,0,1.16902343164525,0.790575555893047,99.6096080907602,3.26462195979018,0.890328018336276,0.488660878060728,3.79431282836832,7.96470830039777,0,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,1.81766864738753,1.42598951353889,4.42451461110142,3.16255825724996,4.12542172992747,6.12791290356818,0,0,0.214337035031592,0.354680467284547,0.535106452806212,2.30368628842969,1.522324745573,0.23467170806371,0.21183207086382,1.32317038832977,2.63818004706368,1.45317984026315,0.422190474497091,0.596861720015682,0.984845398470368,3.49777003955821,29.8534736236921,1.36696704638282,2.47664241555867,5.37064129372164,3.01389531207506,1.6403307326523,1.14389086603261,2.03974115992626,1.81936888020755,3.04039942369732,1.90934123603023,0.316335993581135,1.21991680276109,0.756037385752609,1.25452977608681,0.87345025498471,0.404593039154462,3.2234847732881,2.09404753587224,1.29614973291793,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,1.5624526181274,2.41176492179135,2.17425708743405,2.01621004380506,0.316011120628178,0.608175645870493,0.616265742988964,0.77952493786677,0,0.39736270956253,0.480781798079875,0.295379054349154,0.302899349844443,0.381034033274999,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,5.66825959038028,0,0,0,3.86379188064381,1.31377732815827,2.38097111547445,1.50057865355346,2.50786052017682,16.3778034358949,20.714635642823,17.7597609166213,15.4667864109319,28.0883833105963,29.4603619981983,22.2757425076496,19.8141329418657,20.3914084042892,25.3702552758392,0,1.99512436700516,0.682934423016537,0.486213434136588,0.838452650511929,0.919217542250071,2.66696073361938,3.5025959730612,1.60459604795908,2.52697211763797,4.30914809813408,1.32038438970253,2.71560371662659,2.75308155340938,2.01024141344646,2.85776214769844,3.94006708212509,1.54327376370964,2.47251540481984,1.76638704161277,1.02860775715625,3.19456451086807,2.14592570952589,2.61623549938191,2.54095327121393,2.03075058940024,2.37806364734604,3.41990624869196,3.12349461845482,1.12228454331548,2.49133538060766,2.06859412988683,2.04615521584845,2.01417893541756,1.54325288784913,2.49810577937946,2.10538447600868,3.22306581072447,2.48674831689496,2.42650561031467,3.2461496986859
|short_description=p2@Syne1
}}

Revision as of 16:49, 12 September 2013

Short description:p2@Syne1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Syne1_5end
Coexpression cluster:MCL_coexpression_mm9:552
Association with transcript: 0bp_to_ENSMUST00000041639, NM_153399, uc007egn.1_5end
EntrezGene:Syne1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Syne1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8103.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H151.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H368.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G988.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H288.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H477.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G365.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D79.35
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C15.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H16.51
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2108.04
cerebellum, neonate N30.CNhs11135.1395-42I294.67
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A443.14
corpus striatum, adult.CNhs10487.19-21D854.44
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D528.68
cortex, neonate N30.CNhs11107.1392-42F225.83
diencephalon, adult.CNhs10482.20-12F233.87
diencephalon, neonate N30.CNhs11201.1388-42B231.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A225.61
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G18.67
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D27.25
hippocampus, adult.CNhs10478.13-16E829.44
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H15.55
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B126.05
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E57.25
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A419.66
lung, neonate N25.CNhs11119.1359-25C718.65
lung, neonate N30.CNhs11133.1394-42H225.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C240.46
medulla oblongata, neonate N30.CNhs11200.1396-42A330.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I999.61
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C929.85
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube2.23e-10114
anatomical conduit5.19e-10122
regional part of nervous system2.23e-0954
neural tube2.11e-0852
neural rod2.11e-0852
future spinal cord2.11e-0852
neural keel2.11e-0852
neurectoderm2.27e-0764
neural plate2.27e-0764
presumptive neural plate2.27e-0764
nervous system2.99e-0775
central nervous system4.30e-0773
structure with developmental contribution from neural crest4.72e-0792
occipital lobe6.66e-0710
visual cortex6.66e-0710
neocortex6.66e-0710







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:4795834..4795904,%2B&oldid=2877526"