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FFCP PHASE1:Mm9::chr11:116034546..116034572,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=5|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:116034546..116034572,-|id=chr11:116034546..116034572,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,4.55e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.18e-09!22;UBERON:0007499!1.18e-09!22;UBERON:0006925!1.18e-09!22;UBERON:0009497!1.18e-09!22;UBERON:0000015!1.18e-09!22;UBERON:0002423!1.18e-09!22;UBERON:0006235!1.18e-09!22;UBERON:0008835!1.18e-09!22;UBERON:0003894!1.18e-09!22;UBERON:0004161!1.18e-09!22;UBERON:0008836!1.18e-09!22;UBERON:0002365!2.10e-09!25;UBERON:0002330!2.10e-09!25;UBERON:0009854!9.23e-09!23;UBERON:0009856!9.23e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.32e-24,22;UBERON:0007499,8.32e-24,22;UBERON:0006925,8.32e-24,22;UBERON:0009497,8.32e-24,22;UBERON:0000015,8.32e-24,22;UBERON:0002423,8.32e-24,22;UBERON:0006235,8.32e-24,22;UBERON:0008835,8.32e-24,22;UBERON:0003894,8.32e-24,22;UBERON:0004161,8.32e-24,22;UBERON:0008836,8.32e-24,22;UBERON:0009854,1.31e-22,23;UBERON:0009856,1.31e-22,23;UBERON:0002365,1.67e-20,25;UBERON:0002330,1.67e-20,25;UBERON:0005256,8.51e-13,45;UBERON:0005172,2.03e-11,49;UBERON:0005173,2.03e-11,49;UBERON:0002417,2.03e-11,49;UBERON:0000916,2.03e-11,49;UBERON:0004921,4.95e-11,114;UBERON:0001007,9.87e-11,116;UBERON:0001555,9.87e-11,116;UBERON:0007026,9.87e-11,116;UBERON:0004119,1.92e-10,118;UBERON:0000925,1.92e-10,118;UBERON:0006595,1.92e-10,118;UBERON:0003929,1.11e-09,55;UBERON:0003914,3.21e-09,47;UBERON:0002368,1.36e-08,60;UBERON:0003104,2.18e-08,61;UBERON:0009142,2.18e-08,61;UBERON:0002530,1.24e-07,65;UBERON:0009569,1.86e-07,66;UBERON:0000490,2.05e-07,66;UBERON:0001041,3.88e-07,80;UBERON:0005911,6.31e-07,69;UBERON:0011216,6.67e-07,194|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.20985684522732,1.50268718983904,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,0.255129870453209,0,0.261199789138935,0.319984845586813,0.22940928106717,0.57423196411502,1.29228598847722,0.430942465371778,0.950117097281869,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0.659058548203415,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0,0.207379224616955,0,0.210324961351382,0.571301968807607,0.441737081903227,0.489963196859816,0.191690942036473,0,0,0.893811366596314,0.46081959976873,0.263772575460388,0.182975287204819,0,0.279182999001381,1.12552522006336,0.763991238884051,1.76777151284201,1.56608848879013,0.372798891650601,0.227178579999552,0.0755715601067855,0.289864488701678,4.30211938490693,3.39985666853875,16.7307989407723,18.8435161059824,11.6486990645307,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,1.94112595522402,0,0.29688427812965,0.173485326766136,1.21786191324856,0.922461989024234,1.95939432718409,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0.292780797011547,0.41889341362691,0.766371165625774,0,0,0,1.04853447583376,0,0.125654352112864,0,0.255715457330331,0.62336413367868,0.486723789203273,0.101839363850316,0,0.758168275301024,1.26265113531884,0,0.229902104433473,0,0.452114453507145,0.204109497453984,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0.877199924551994,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,1.98251269790279,1.32225283331772,0,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0,3.32170343081158,0.494096864172033,0.754005626400808,1.39269530428806,0.974820435595601,0.898819408654221,2.16138049874694,1.99141273254367,0,0,0,0.203651327845314,0.387904974335251,0.561086559122548,0.189709611372772,0.885660887877613,0.784993639206874,0.493588655687202,5.03969466048153,0,0.196558995113203,0,0.405720242777006,0.241177159752417,0.763877555344259,1.43848068725405,5.5125977103512,3.84385978463314,77.6348315247715,1.11642284300551,2.80833905803104,4.54641980304801,6.99649912735457,5.30687873499704,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0,0,0,0.584511715822624,0,0.321321316421807,0,0,0,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,1.45740418314925,0.18542530201051,0,0,0,0,0,0.228778173206523,0.339956859987711,0,0.414599921413271,1.90934123603023,0,0,0.216010681643603,0.418176592028937,0.436725127492355,1.21377911746339,0.578574190077352,1.57053565190418,1.16653475962614,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,1.20297227640581,0,0,0,0,0,0,0.31136204275253,0,0,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0.859484216193193,0.382576664137687,0,0.231867835620421|short_description=p@chr11:116034546..116034572,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=5
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr11:116034546..116034572,-
|id=chr11:116034546..116034572,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,4.55e-09,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.18e-09!22;UBERON:0007499!1.18e-09!22;UBERON:0006925!1.18e-09!22;UBERON:0009497!1.18e-09!22;UBERON:0000015!1.18e-09!22;UBERON:0002423!1.18e-09!22;UBERON:0006235!1.18e-09!22;UBERON:0008835!1.18e-09!22;UBERON:0003894!1.18e-09!22;UBERON:0004161!1.18e-09!22;UBERON:0008836!1.18e-09!22;UBERON:0002365!2.10e-09!25;UBERON:0002330!2.10e-09!25;UBERON:0009854!9.23e-09!23;UBERON:0009856!9.23e-09!23
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.32e-24,22;UBERON:0007499,8.32e-24,22;UBERON:0006925,8.32e-24,22;UBERON:0009497,8.32e-24,22;UBERON:0000015,8.32e-24,22;UBERON:0002423,8.32e-24,22;UBERON:0006235,8.32e-24,22;UBERON:0008835,8.32e-24,22;UBERON:0003894,8.32e-24,22;UBERON:0004161,8.32e-24,22;UBERON:0008836,8.32e-24,22;UBERON:0009854,1.31e-22,23;UBERON:0009856,1.31e-22,23;UBERON:0002365,1.67e-20,25;UBERON:0002330,1.67e-20,25;UBERON:0005256,8.51e-13,45;UBERON:0005172,2.03e-11,49;UBERON:0005173,2.03e-11,49;UBERON:0002417,2.03e-11,49;UBERON:0000916,2.03e-11,49;UBERON:0004921,4.95e-11,114;UBERON:0001007,9.87e-11,116;UBERON:0001555,9.87e-11,116;UBERON:0007026,9.87e-11,116;UBERON:0004119,1.92e-10,118;UBERON:0000925,1.92e-10,118;UBERON:0006595,1.92e-10,118;UBERON:0003929,1.11e-09,55;UBERON:0003914,3.21e-09,47;UBERON:0002368,1.36e-08,60;UBERON:0003104,2.18e-08,61;UBERON:0009142,2.18e-08,61;UBERON:0002530,1.24e-07,65;UBERON:0009569,1.86e-07,66;UBERON:0000490,2.05e-07,66;UBERON:0001041,3.88e-07,80;UBERON:0005911,6.31e-07,69;UBERON:0011216,6.67e-07,194
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.20985684522732,1.50268718983904,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,0.255129870453209,0,0.261199789138935,0.319984845586813,0.22940928106717,0.57423196411502,1.29228598847722,0.430942465371778,0.950117097281869,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0.659058548203415,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0,0.207379224616955,0,0.210324961351382,0.571301968807607,0.441737081903227,0.489963196859816,0.191690942036473,0,0,0.893811366596314,0.46081959976873,0.263772575460388,0.182975287204819,0,0.279182999001381,1.12552522006336,0.763991238884051,1.76777151284201,1.56608848879013,0.372798891650601,0.227178579999552,0.0755715601067855,0.289864488701678,4.30211938490693,3.39985666853875,16.7307989407723,18.8435161059824,11.6486990645307,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,1.94112595522402,0,0.29688427812965,0.173485326766136,1.21786191324856,0.922461989024234,1.95939432718409,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0.292780797011547,0.41889341362691,0.766371165625774,0,0,0,1.04853447583376,0,0.125654352112864,0,0.255715457330331,0.62336413367868,0.486723789203273,0.101839363850316,0,0.758168275301024,1.26265113531884,0,0.229902104433473,0,0.452114453507145,0.204109497453984,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0.877199924551994,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,1.98251269790279,1.32225283331772,0,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0,3.32170343081158,0.494096864172033,0.754005626400808,1.39269530428806,0.974820435595601,0.898819408654221,2.16138049874694,1.99141273254367,0,0,0,0.203651327845314,0.387904974335251,0.561086559122548,0.189709611372772,0.885660887877613,0.784993639206874,0.493588655687202,5.03969466048153,0,0.196558995113203,0,0.405720242777006,0.241177159752417,0.763877555344259,1.43848068725405,5.5125977103512,3.84385978463314,77.6348315247715,1.11642284300551,2.80833905803104,4.54641980304801,6.99649912735457,5.30687873499704,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0,0,0,0.584511715822624,0,0.321321316421807,0,0,0,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,1.45740418314925,0.18542530201051,0,0,0,0,0,0.228778173206523,0.339956859987711,0,0.414599921413271,1.90934123603023,0,0,0.216010681643603,0.418176592028937,0.436725127492355,1.21377911746339,0.578574190077352,1.57053565190418,1.16653475962614,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,1.20297227640581,0,0,0,0,0,0,0.31136204275253,0,0,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0.859484216193193,0.382576664137687,0,0.231867835620421
|short_description=p@chr11:116034546..116034572,-
}}

Revision as of 18:50, 12 September 2013

Short description:p@chr11:116034546..116034572, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:116034546..116034572, -
Coexpression cluster:MCL_coexpression_mm9:5
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr11:116034546..116034572-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A877.63
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte4.55e-095

Uber anatomy
Ontology termp-valuen
liver8.32e-2422
epithelial sac8.32e-2422
digestive gland8.32e-2422
epithelium of foregut-midgut junction8.32e-2422
anatomical boundary8.32e-2422
hepatobiliary system8.32e-2422
foregut-midgut junction8.32e-2422
hepatic diverticulum8.32e-2422
liver primordium8.32e-2422
septum transversum8.32e-2422
liver bud8.32e-2422
digestive tract diverticulum1.31e-2223
sac1.31e-2223
exocrine gland1.67e-2025
exocrine system1.67e-2025
trunk mesenchyme8.51e-1345
abdomen element2.03e-1149
abdominal segment element2.03e-1149
abdominal segment of trunk2.03e-1149
abdomen2.03e-1149
subdivision of digestive tract4.95e-11114
digestive system9.87e-11116
digestive tract9.87e-11116
primitive gut9.87e-11116
endoderm-derived structure1.92e-10118
endoderm1.92e-10118
presumptive endoderm1.92e-10118
gut epithelium1.11e-0955
epithelial tube3.21e-0947
endocrine gland1.36e-0860
mesenchyme2.18e-0861
entire embryonic mesenchyme2.18e-0861
gland1.24e-0765
subdivision of trunk1.86e-0766
unilaminar epithelium2.05e-0766
foregut3.88e-0780
endo-epithelium6.31e-0769
organ system subdivision6.67e-07194







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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