FFCP PHASE1:Mm9::chr11:116295401..116295420,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319370|HGNC=|MCL_coexpression_id=2639|UniProt=Q8BQH4|association_with_transcript=0bp_to_ENSMUST00000057676,NM_176902,uc007mlb.1_5end|description=CAGE_peak_1_at_Fam100b_5end|id=chr11:116295401..116295420,+|ontology_enrichment_celltype=CL:0002563!6.12e-07!9;CL:0002251!6.12e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,6.12e-07,9;CL:0002251,6.12e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.50e-11!130;UBERON:0000925!1.50e-11!130;UBERON:0006595!1.50e-11!130;UBERON:0001007!8.50e-11!128;UBERON:0001555!8.50e-11!128;UBERON:0007026!8.50e-11!128;UBERON:0004923!9.15e-11!24;UBERON:0000344!1.80e-10!15;UBERON:0004921!6.50e-10!126;UBERON:0004185!6.50e-10!126;UBERON:0005409!7.71e-10!59;UBERON:0000160!2.00e-09!43;UBERON:0001242!2.95e-09!13;UBERON:0000060!2.95e-09!13;UBERON:0001262!2.95e-09!13;UBERON:0004786!2.95e-09!13;UBERON:0003350!6.12e-07!9;UBERON:0004808!6.12e-07!9;UBERON:0001277!6.12e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.29e-16,31;UBERON:0005409,6.87e-15,47;UBERON:0004119,1.93e-14,118;UBERON:0000925,1.93e-14,118;UBERON:0006595,1.93e-14,118;UBERON:0001007,1.35e-13,116;UBERON:0001555,1.35e-13,116;UBERON:0007026,1.35e-13,116;UBERON:0004921,1.37e-12,114;UBERON:0004923,9.15e-11,24;UBERON:0000344,1.80e-10,15;UBERON:0001242,2.95e-09,13;UBERON:0001262,2.95e-09,13;UBERON:0004786,2.95e-09,13;UBERON:0003350,6.12e-07,9;UBERON:0004808,6.12e-07,9;UBERON:0001277,6.12e-07,9|phase1_expression=5.12476310735341,199.264957762075,301.664495715262,615.212205798092,710.27014506392,144.208294572313,141.102034919698,11.3628524628587,512.470948632067,583.990993173374,60.4399427836033,81.7664629702198,10.2720437958723,16.7847172644475,21.6521345180181,23.8920815519995,28.682037003254,11.987562283613,10.2835825204304,11.8829102503448,15.1377056468904,30.1844491650691,28.9931765944218,126.873991275171,113.787003409316,200.981187440257,267.072437618626,156.863057395327,108.693395929046,105.348594239651,126.829852094834,27.3063189587641,24.6025915033828,0,77.1233824735903,65.6626849166045,77.1760166671755,20.5080499061085,20.3147189576188,12.5645698553712,33.5291948177678,34.1522742479223,15.5363312969969,10.4494358919729,10.239070053171,8.44315059943735,43.0315239391422,24.6368426709905,37.1269648821257,27.414615769474,18.6181940761732,35.9381410912429,34.2276516357782,66.7333170650437,117.29673590072,13.1202312378333,11.4613375975503,5.67239301505187,12.3413041124355,10.5798195854407,12.0427966666174,16.6033820713875,22.2323699027785,23.8473425079571,29.6659908770092,32.6820852875206,19.4740071836963,29.9690278150813,17.0050964185903,20.9259204414121,20.6118462124354,4.85606673486466,7.50953039235486,22.7832886539815,16.9646483702278,21.1420320920305,2.20231761998777,3.44755812830007,3.99376986466233,9.10015385338338,7.593474419,8.85552729946492,4.18774498502071,4.50210088025344,2.75036845998258,5.30331453852602,6.83384067835694,9.13357284543973,17.5684768532987,49.8772296704784,29.8560423362728,7.74381489283248,93.1560727179618,7.55584468292944,3.24888208723835,5.37632264516803,20.7857741794993,13.8048561288227,10.6512261887176,8.48014978824817,8.30976176682415,5.13305909657271,10.1922095882658,0,72.0915166567343,71.954201794928,60.662933401774,64.5138920412689,40.653247732606,5.93768556259299,16.3076207160168,14.3098774806706,15.681853813412,13.2635923686308,10.1126288136706,9.17366116706631,323.82540773203,9.10975948595443,38.9228642857945,13.7501822455298,20.759102735277,18.9101348722737,52.1896931410742,5.27005434620785,2.09446706813455,121.342101224081,54.2762514011819,34.1944556666242,36.0879444887504,4.79330046095433,3.20250421973039,13.0680526197379,2.9550134432687,2.55715457330331,5.61027720310812,2.27137768294861,11.1004906596845,19.5318943857846,27.2940579108369,12.8369532090749,15.8746940414499,11.4951052216736,19.6267721487831,15.0704817835715,12.7908618404496,13.9643955110486,17.2411173189901,8.2785078636485,35.568718833919,16.8304411349359,8.62160508403349,17.3164628617784,16.4047877043103,19.5021213252413,27.1632420058485,22.2918378836712,23.87524836865,36.0287069960601,45.4661599032948,23.4052122965117,19.465662978431,18.9065164534066,19.8865577891577,15.7411385397923,19.2833891109223,15.5797742982773,14.7550370769791,11.6765342367169,9.54447129498187,8.70087559619205,10.2957388123237,7.16379938384128,9.87975518809728,7.64976586934119,4.83666881697493,12.1427442607556,106.725266903767,176.388527964584,25.1680135631576,21.1335371392999,41.1087201617478,50.8242482050823,56.2616450927522,56.6872365815426,65.0104814315981,54.8447519230956,32.4222419352348,41.1839897125182,31.5841821132975,83.5902050048426,71.9739706082732,109.925982836411,49.6929900497074,23.4209450849944,31.5581659884625,25.252764652819,25.407775818959,18.6561280908247,30.6697205052648,19.0417090893687,18.9968460688064,11.4759362447274,4.44678940630723,25.5273011745624,25.15955137449,25.6342808118733,31.6461789366065,24.6000702947465,21.6431974014207,27.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| ||
|EntrezGene=319370 | |||
|HGNC= | |||
|MCL_coexpression_id=2639 | |||
|UniProt=Q8BQH4 | |||
|association_with_transcript=0bp_to_ENSMUST00000057676,NM_176902,uc007mlb.1_5end | |||
|description=CAGE_peak_1_at_Fam100b_5end | |||
|id=chr11:116295401..116295420,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.12e-07!9;CL:0002251!6.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.12e-07,9;CL:0002251,6.12e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.50e-11!130;UBERON:0000925!1.50e-11!130;UBERON:0006595!1.50e-11!130;UBERON:0001007!8.50e-11!128;UBERON:0001555!8.50e-11!128;UBERON:0007026!8.50e-11!128;UBERON:0004923!9.15e-11!24;UBERON:0000344!1.80e-10!15;UBERON:0004921!6.50e-10!126;UBERON:0004185!6.50e-10!126;UBERON:0005409!7.71e-10!59;UBERON:0000160!2.00e-09!43;UBERON:0001242!2.95e-09!13;UBERON:0000060!2.95e-09!13;UBERON:0001262!2.95e-09!13;UBERON:0004786!2.95e-09!13;UBERON:0003350!6.12e-07!9;UBERON:0004808!6.12e-07!9;UBERON:0001277!6.12e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.29e-16,31;UBERON:0005409,6.87e-15,47;UBERON:0004119,1.93e-14,118;UBERON:0000925,1.93e-14,118;UBERON:0006595,1.93e-14,118;UBERON:0001007,1.35e-13,116;UBERON:0001555,1.35e-13,116;UBERON:0007026,1.35e-13,116;UBERON:0004921,1.37e-12,114;UBERON:0004923,9.15e-11,24;UBERON:0000344,1.80e-10,15;UBERON:0001242,2.95e-09,13;UBERON:0001262,2.95e-09,13;UBERON:0004786,2.95e-09,13;UBERON:0003350,6.12e-07,9;UBERON:0004808,6.12e-07,9;UBERON:0001277,6.12e-07,9 | |||
|phase1_expression=5.12476310735341,199.264957762075,301.664495715262,615.212205798092,710.27014506392,144.208294572313,141.102034919698,11.3628524628587,512.470948632067,583.990993173374,60.4399427836033,81.7664629702198,10.2720437958723,16.7847172644475,21.6521345180181,23.8920815519995,28.682037003254,11.987562283613,10.2835825204304,11.8829102503448,15.1377056468904,30.1844491650691,28.9931765944218,126.873991275171,113.787003409316,200.981187440257,267.072437618626,156.863057395327,108.693395929046,105.348594239651,126.829852094834,27.3063189587641,24.6025915033828,0,77.1233824735903,65.6626849166045,77.1760166671755,20.5080499061085,20.3147189576188,12.5645698553712,33.5291948177678,34.1522742479223,15.5363312969969,10.4494358919729,10.239070053171,8.44315059943735,43.0315239391422,24.6368426709905,37.1269648821257,27.414615769474,18.6181940761732,35.9381410912429,34.2276516357782,66.7333170650437,117.29673590072,13.1202312378333,11.4613375975503,5.67239301505187,12.3413041124355,10.5798195854407,12.0427966666174,16.6033820713875,22.2323699027785,23.8473425079571,29.6659908770092,32.6820852875206,19.4740071836963,29.9690278150813,17.0050964185903,20.9259204414121,20.6118462124354,4.85606673486466,7.50953039235486,22.7832886539815,16.9646483702278,21.1420320920305,2.20231761998777,3.44755812830007,3.99376986466233,9.10015385338338,7.593474419,8.85552729946492,4.18774498502071,4.50210088025344,2.75036845998258,5.30331453852602,6.83384067835694,9.13357284543973,17.5684768532987,49.8772296704784,29.8560423362728,7.74381489283248,93.1560727179618,7.55584468292944,3.24888208723835,5.37632264516803,20.7857741794993,13.8048561288227,10.6512261887176,8.48014978824817,8.30976176682415,5.13305909657271,10.1922095882658,0,72.0915166567343,71.954201794928,60.662933401774,64.5138920412689,40.653247732606,5.93768556259299,16.3076207160168,14.3098774806706,15.681853813412,13.2635923686308,10.1126288136706,9.17366116706631,323.82540773203,9.10975948595443,38.9228642857945,13.7501822455298,20.759102735277,18.9101348722737,52.1896931410742,5.27005434620785,2.09446706813455,121.342101224081,54.2762514011819,34.1944556666242,36.0879444887504,4.79330046095433,3.20250421973039,13.0680526197379,2.9550134432687,2.55715457330331,5.61027720310812,2.27137768294861,11.1004906596845,19.5318943857846,27.2940579108369,12.8369532090749,15.8746940414499,11.4951052216736,19.6267721487831,15.0704817835715,12.7908618404496,13.9643955110486,17.2411173189901,8.2785078636485,35.568718833919,16.8304411349359,8.62160508403349,17.3164628617784,16.4047877043103,19.5021213252413,27.1632420058485,22.2918378836712,23.87524836865,36.0287069960601,45.4661599032948,23.4052122965117,19.465662978431,18.9065164534066,19.8865577891577,15.7411385397923,19.2833891109223,15.5797742982773,14.7550370769791,11.6765342367169,9.54447129498187,8.70087559619205,10.2957388123237,7.16379938384128,9.87975518809728,7.64976586934119,4.83666881697493,12.1427442607556,106.725266903767,176.388527964584,25.1680135631576,21.1335371392999,41.1087201617478,50.8242482050823,56.2616450927522,56.6872365815426,65.0104814315981,54.8447519230956,32.4222419352348,41.1839897125182,31.5841821132975,83.5902050048426,71.9739706082732,109.925982836411,49.6929900497074,23.4209450849944,31.5581659884625,25.252764652819,25.407775818959,18.6561280908247,30.6697205052648,19.0417090893687,18.9968460688064,11.4759362447274,4.44678940630723,25.5273011745624,25.15955137449,25.6342808118733,31.6461789366065,24.6000702947465,21.6431974014207,27.0434369203762,11.5116011010275,16.4736847912849,12.9391385874619,16.7463426450827,15.2898459826135,14.1444171650383,24.9362404795458,3.85954817090694,15.1497615936616,16.1067700004912,28.6818358537966,24.2735472658519,30.7444225257938,26.9685074481323,22.1380586023993,16.3912264200551,17.339865851681,19.2674279994434,14.0320196418589,11.9620219742489,13.1240586218081,10.8486793936134,6.03165135757089,3.26343410291226,12.7858710984949,13.7968373152366,4.33486592967038,3.6335622843583,6.06559297893699,12.3710754330143,20.1925260426404,19.1314984705353,15.0796378412959,19.5954414321093,17.8238939265915,18.6830510320629,22.6693992937941,27.179794785752,19.3691011193797,7.39039027770156,13.7681882652021,18.16269157406,7.4928001302645,38.9329490215184,3.98235415019888,23.3069410708782,22.6742667723563,16.2200368590072,21.8523400731772,13.2197113615889,22.7416897988035,9.08834323693764,12.4774082434652,6.0046984007805,6.32511651449993,5.15677716240934,9.87274856685985,17.8260483090997,17.5927809944546,15.6466035573062,11.7044554203901,13.9127677729615,16.29035303961,18.8768268451052,67.3507802142849,44.0610707396746,25.5812941743756,47.3223545942048,25.8343082713449,30.2167753890061,29.6043413127778,37.9165478411091,71.9957666475731,4.63563255026274,31.7819838284006,14.859854493352,19.0750363190803,25.9948470666474,24.1948783066215,20.3612574153805,52.3533564381074,59.6193186898783,55.6945894431828,49.6428721367859,19.4546636052398,18.7053909756701,25.0572390706579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| |||
|short_description=p1@Fam100b | |||
}} |
Revision as of 18:52, 12 September 2013
Short description: | p1@Fam100b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam100b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2639 |
Association with transcript: | 0bp_to_ENSMUST00000057676, NM_176902, uc007mlb.1_5end |
EntrezGene: | Fam100b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.12e-07 | 9 |
epithelial cell of alimentary canal | 6.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.29e-16 | 31 |
gastrointestinal system | 6.87e-15 | 47 |
endoderm-derived structure | 1.93e-14 | 118 |
endoderm | 1.93e-14 | 118 |
presumptive endoderm | 1.93e-14 | 118 |
digestive system | 1.35e-13 | 116 |
digestive tract | 1.35e-13 | 116 |
primitive gut | 1.35e-13 | 116 |
subdivision of digestive tract | 1.37e-12 | 114 |
organ component layer | 9.15e-11 | 24 |
mucosa | 1.80e-10 | 15 |
intestinal mucosa | 2.95e-09 | 13 |
wall of intestine | 2.95e-09 | 13 |
gastrointestinal system mucosa | 2.95e-09 | 13 |
epithelium of mucosa | 6.12e-07 | 9 |
gastrointestinal system epithelium | 6.12e-07 | 9 |
intestinal epithelium | 6.12e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.