FFCP PHASE1:Mm9::chr11:116712225..116712245,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=5|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:116712225..116712245,-|id=chr11:116712225..116712245,-|ontology_enrichment_celltype=CL:0000723!9.30e-09!91;CL:0000048!9.30e-09!91;CL:0000034!1.58e-08!97|ontology_enrichment_celltype_v019_2=CL:0000723,7.38e-11,91;CL:0000048,7.38e-11,91;CL:0000034,2.91e-10,97;CL:0002320,1.49e-07,46;CL:0000134,1.49e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.49e-07,46|phase1_expression=1.92178616525753,0,0,0.60492842261366,0.500895729946347,0.671517087647559,1.16806320297763,0.516493293766305,3.801295498095,4.44722600011788,2.39705155515707,1.27635454392538,1.02720437958723,1.66098764596095,1.99865857089398,2.22722794128809,0.699561878128147,0.630924330716475,1.09691546884591,0.84877930359606,0.850432901510698,1.98581902401771,0.522399578277871,0.799962113967033,0.91763712426868,0.57423196411502,0,1.07735616342945,1.14014051673824,0.504060259519861,1.55211357458713,0,1.23012957516914,0,1.1554064790051,1.49611180822643,0.612508068787107,0,0,1.57057123192139,2.35292595212406,1.36609096991689,0,0.629484089877886,0.405507724878058,0.550640256485045,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.419959264876088,0,2.18117387875057,1.45072428402269,1.34437519656986,1.02903774414379,0.286533439938757,1.03134418455488,0.809265843438391,1.05798195854407,1.26766280701236,1.35537812827653,0,1.3498495759221,2.96659908770092,0.7104801149461,0,2.30530983192933,1.24427534770173,2.02508907497536,1.26194976810829,1.42825492201902,1.32521124570968,0.734944795289724,2.39613677545591,1.83843757322004,1.10115880999389,0.638436690425939,0.46081959976873,1.71452174049252,2.28719109006024,2.08365348222704,1.11673199600552,0,1.22238598221448,0.883885756421003,1.70846016958924,1.67759501242771,0.454357159999104,0.377857800533928,0.869593466105033,3.44169550792555,0.679971333707751,3.77792234146472,4.54843492213368,0.448026887097336,0.421333260395256,1.02258193546835,2.59786004602869,1.41335829804136,0.704217098883403,0,0,0,1.5154372870785,1.52015919285059,1.51657333504435,0.91347103775248,0,0.890652834388949,1.04091196059682,0.608930956624282,0.691846491768175,0.904335843315735,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,0,0.209446706813455,0.766371165625774,2.15667224110656,1.79970819298022,1.90605340609597,0.299581278809645,0,0.753926112677186,0.521472960576829,0.767146371990992,0.41557608911912,0.324482526135515,0.712875546952214,0.622034853050465,0.505445516867349,0.420883711772948,1.17108398666433,0.919608417733892,0.720248519221397,1.80845781402858,0.95251098811859,1.2811372028485,0.655912071918102,0,1.94011193639558,1.70195472151037,0.527853372491847,1.09597866213787,0.556094498451196,0,0.61734640922383,0.796137067273973,0.702213187313235,0.772043721344145,1.42081749697796,1.03562886267751,0.469052119962192,1.44049649168812,0.710234206755631,0.983821158737019,1.54267112887378,0.697601834251224,0.536546802799238,0.934122738937356,0.822799249567402,1.14917224855367,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,0.210289948564127,1.02904612379284,0.660837565967596,0,0.853153002140936,1.62565670302307,0.77320476793256,0.605050573870028,0.667134131534611,0.190225626112559,0,0.164698954724011,1.00534083520108,0,0.19496408711912,0.898819408654221,1.94524244887225,1.99141273254367,1.13800740571849,1.37098215131675,1.1270773567308,2.03651327845314,0.969762435838129,0.771494018793504,0.442655759869801,0.590440591918409,0.156998727841375,0.493588655687202,0.889357881261447,1.33476084572875,0.589676985339609,0.899448449539415,0.608580364165509,2.41177159752417,0.50925170356284,0.863088412352432,0.486405680325106,1.37280706594041,17.2521847832825,0,0.624075346229121,1.26289438973556,1.25578189465339,0.482443521363367,0.739012760666419,2.08440552947533,0.977789858652155,1.86719594352707,1.40814148973101,0.837531287209079,0,0.585400943573396,0.472905432318573,0.221464689648775,0.956728611944923,0.327726629431476,0.863424909329478,0.433947175744535,0,1.08781136763742,0.983528546038072,0.275936746304732,0.481651769963376,0.586058432961016,1.63934945376675,0.504941854408746,1.26203287766503,1.56175497718655,1.50796378412959,0.477937595905104,0.891194696329576,0.566153061577665,0.809621403349789,0.876767573733936,0.790575555893047,0.642642632843614,0.851640511249612,0.712262414669021,0.488660878060728,0,0,0.971122544619926,1.51161778482376,1.32023555829129,0.885905678642318,0.922305443831782,0.516856586336442,1.45413491791002,0.712994756769443,0,1.05418608574999,1.03135543248187,0.340439605753788,1.08036656418786,1.16422815404479,1.28602221018955,0.354680467284547,0.535106452806212,0.493647061806363,0.304464949114599,1.40803024838226,0.21183207086382,0,0.32977250588296,0,0.603129249281559,0.358117032009409,0.820704498725306,0.874442509889552,0.18542530201051,0.854354403989263,0.82554747185289,1.11116716421827,1.50694765603753,0.546776910884101,1.60144721244566,1.18984900995699,0.419854356970974,0.690999869022119,3.81868247206045,1.10717597753397,0.609958401380546,1.40406943068342,0.209088296014469,0.655087691238533,1.61837215661785,0.495920734352016,1.83229159388821,0.518459893167171,1.86401793926078,1.69107881605257,0.747582730219894,0.992750942742586,0.388902376688095,1.03327858782185,0.675824501963113,0.821500670520278,1.3020438484395,0.419437377702843,1.69108884578204,0.576060012515731,0.948033361884535,1.21635129174099,1.54066435747241,0.909445760844565,0.716106782669926,0.79472541912506,1.44234539423963,0.886137163047463,1.00966449948148,0.762068066549998,1.41156659191577,0.974578807397524,1.15454209968395,0.818138315270983,0.453460767230423,0.887943813496259,1.34570784914214,0.503653849092235,0.386379188064381,0.187682475451182,0.549454872801795,0.428736758158132,1.50471631210609,0,0.920650473014354,1.14579102687879,0.859265911718438,0,0,1.35004500046361,0,1.35942722695261,0,1.55681021376265,0.798049746802062,0.682934423016537,1.70174701947806,0.838452650511929,0.919217542250071,0.666740183404846,0.618105171716683,0,1.76888048234658,0.50695859978048,0.943131706930381,0.187283014939765,0.768301828858431,0.459483751644906,0.952587382566147,0.231768651889711,0.38581844092741,0.824171801606613,1.47198920134397,0.342869252385415,1.06485483695602,0,0.436039249896986,0.470546902076653,0.930760686808441,1.28049581010941,0.526139422875686,0.814824683075171,0.561142271657738,0.830445126869219,0.591026894253381,0.818462086339379,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,0.429742108096597,0,0.441182838239031,0|short_description=p@chr11:116712225..116712245,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:116712225..116712245,- | |||
|id=chr11:116712225..116712245,- | |||
|ontology_enrichment_celltype=CL:0000723!9.30e-09!91;CL:0000048!9.30e-09!91;CL:0000034!1.58e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,7.38e-11,91;CL:0000048,7.38e-11,91;CL:0000034,2.91e-10,97;CL:0002320,1.49e-07,46;CL:0000134,1.49e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.49e-07,46 | |||
|phase1_expression=1.92178616525753,0,0,0.60492842261366,0.500895729946347,0.671517087647559,1.16806320297763,0.516493293766305,3.801295498095,4.44722600011788,2.39705155515707,1.27635454392538,1.02720437958723,1.66098764596095,1.99865857089398,2.22722794128809,0.699561878128147,0.630924330716475,1.09691546884591,0.84877930359606,0.850432901510698,1.98581902401771,0.522399578277871,0.799962113967033,0.91763712426868,0.57423196411502,0,1.07735616342945,1.14014051673824,0.504060259519861,1.55211357458713,0,1.23012957516914,0,1.1554064790051,1.49611180822643,0.612508068787107,0,0,1.57057123192139,2.35292595212406,1.36609096991689,0,0.629484089877886,0.405507724878058,0.550640256485045,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.419959264876088,0,2.18117387875057,1.45072428402269,1.34437519656986,1.02903774414379,0.286533439938757,1.03134418455488,0.809265843438391,1.05798195854407,1.26766280701236,1.35537812827653,0,1.3498495759221,2.96659908770092,0.7104801149461,0,2.30530983192933,1.24427534770173,2.02508907497536,1.26194976810829,1.42825492201902,1.32521124570968,0.734944795289724,2.39613677545591,1.83843757322004,1.10115880999389,0.638436690425939,0.46081959976873,1.71452174049252,2.28719109006024,2.08365348222704,1.11673199600552,0,1.22238598221448,0.883885756421003,1.70846016958924,1.67759501242771,0.454357159999104,0.377857800533928,0.869593466105033,3.44169550792555,0.679971333707751,3.77792234146472,4.54843492213368,0.448026887097336,0.421333260395256,1.02258193546835,2.59786004602869,1.41335829804136,0.704217098883403,0,0,0,1.5154372870785,1.52015919285059,1.51657333504435,0.91347103775248,0,0.890652834388949,1.04091196059682,0.608930956624282,0.691846491768175,0.904335843315735,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,0,0.209446706813455,0.766371165625774,2.15667224110656,1.79970819298022,1.90605340609597,0.299581278809645,0,0.753926112677186,0.521472960576829,0.767146371990992,0.41557608911912,0.324482526135515,0.712875546952214,0.622034853050465,0.505445516867349,0.420883711772948,1.17108398666433,0.919608417733892,0.720248519221397,1.80845781402858,0.95251098811859,1.2811372028485,0.655912071918102,0,1.94011193639558,1.70195472151037,0.527853372491847,1.09597866213787,0.556094498451196,0,0.61734640922383,0.796137067273973,0.702213187313235,0.772043721344145,1.42081749697796,1.03562886267751,0.469052119962192,1.44049649168812,0.710234206755631,0.983821158737019,1.54267112887378,0.697601834251224,0.536546802799238,0.934122738937356,0.822799249567402,1.14917224855367,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,0.210289948564127,1.02904612379284,0.660837565967596,0,0.853153002140936,1.62565670302307,0.77320476793256,0.605050573870028,0.667134131534611,0.190225626112559,0,0.164698954724011,1.00534083520108,0,0.19496408711912,0.898819408654221,1.94524244887225,1.99141273254367,1.13800740571849,1.37098215131675,1.1270773567308,2.03651327845314,0.969762435838129,0.771494018793504,0.442655759869801,0.590440591918409,0.156998727841375,0.493588655687202,0.889357881261447,1.33476084572875,0.589676985339609,0.899448449539415,0.608580364165509,2.41177159752417,0.50925170356284,0.863088412352432,0.486405680325106,1.37280706594041,17.2521847832825,0,0.624075346229121,1.26289438973556,1.25578189465339,0.482443521363367,0.739012760666419,2.08440552947533,0.977789858652155,1.86719594352707,1.40814148973101,0.837531287209079,0,0.585400943573396,0.472905432318573,0.221464689648775,0.956728611944923,0.327726629431476,0.863424909329478,0.433947175744535,0,1.08781136763742,0.983528546038072,0.275936746304732,0.481651769963376,0.586058432961016,1.63934945376675,0.504941854408746,1.26203287766503,1.56175497718655,1.50796378412959,0.477937595905104,0.891194696329576,0.566153061577665,0.809621403349789,0.876767573733936,0.790575555893047,0.642642632843614,0.851640511249612,0.712262414669021,0.488660878060728,0,0,0.971122544619926,1.51161778482376,1.32023555829129,0.885905678642318,0.922305443831782,0.516856586336442,1.45413491791002,0.712994756769443,0,1.05418608574999,1.03135543248187,0.340439605753788,1.08036656418786,1.16422815404479,1.28602221018955,0.354680467284547,0.535106452806212,0.493647061806363,0.304464949114599,1.40803024838226,0.21183207086382,0,0.32977250588296,0,0.603129249281559,0.358117032009409,0.820704498725306,0.874442509889552,0.18542530201051,0.854354403989263,0.82554747185289,1.11116716421827,1.50694765603753,0.546776910884101,1.60144721244566,1.18984900995699,0.419854356970974,0.690999869022119,3.81868247206045,1.10717597753397,0.609958401380546,1.40406943068342,0.209088296014469,0.655087691238533,1.61837215661785,0.495920734352016,1.83229159388821,0.518459893167171,1.86401793926078,1.69107881605257,0.747582730219894,0.992750942742586,0.388902376688095,1.03327858782185,0.675824501963113,0.821500670520278,1.3020438484395,0.419437377702843,1.69108884578204,0.576060012515731,0.948033361884535,1.21635129174099,1.54066435747241,0.909445760844565,0.716106782669926,0.79472541912506,1.44234539423963,0.886137163047463,1.00966449948148,0.762068066549998,1.41156659191577,0.974578807397524,1.15454209968395,0.818138315270983,0.453460767230423,0.887943813496259,1.34570784914214,0.503653849092235,0.386379188064381,0.187682475451182,0.549454872801795,0.428736758158132,1.50471631210609,0,0.920650473014354,1.14579102687879,0.859265911718438,0,0,1.35004500046361,0,1.35942722695261,0,1.55681021376265,0.798049746802062,0.682934423016537,1.70174701947806,0.838452650511929,0.919217542250071,0.666740183404846,0.618105171716683,0,1.76888048234658,0.50695859978048,0.943131706930381,0.187283014939765,0.768301828858431,0.459483751644906,0.952587382566147,0.231768651889711,0.38581844092741,0.824171801606613,1.47198920134397,0.342869252385415,1.06485483695602,0,0.436039249896986,0.470546902076653,0.930760686808441,1.28049581010941,0.526139422875686,0.814824683075171,0.561142271657738,0.830445126869219,0.591026894253381,0.818462086339379,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,0.429742108096597,0,0.441182838239031,0 | |||
|short_description=p@chr11:116712225..116712245,- | |||
}} | |||
Revision as of 18:53, 12 September 2013
| Short description: | p@chr11:116712225..116712245, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr11:116712225..116712245, - |
| Coexpression cluster: | MCL_coexpression_mm9:5 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| somatic stem cell | 7.38e-11 | 91 |
| multi fate stem cell | 7.38e-11 | 91 |
| stem cell | 2.91e-10 | 97 |
| connective tissue cell | 1.49e-07 | 46 |
| mesenchymal cell | 1.49e-07 | 46 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.49e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
