FFCP PHASE1:Mm9::chr11:118216631..118216648,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21858|HGNC=|MCL_coexpression_id=487|UniProt=Q6PI17,Q8BSJ3|association_with_transcript=76bp_to_NM_011594,uc007mow.1_5end|description=CAGE_peak_1_at_Timp2_5end|id=chr11:118216631..118216648,-|ontology_enrichment_celltype=CL:0000055!2.80e-07!50;CL:0000333!4.04e-07!10;CL:0000095!4.04e-07!10;CL:0000243!4.04e-07!10;CL:0000123!4.04e-07!10;CL:0000125!4.04e-07!10;CL:0000030!4.04e-07!10;CL:0000339!4.04e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,4.04e-07,10;CL:0000095,4.04e-07,10;CL:0000243,4.04e-07,10;CL:0000123,4.04e-07,10;CL:0000125,4.04e-07,10;CL:0000030,4.04e-07,10;CL:0000339,4.04e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.34e-08!102;UBERON:0000924!2.34e-08!102;UBERON:0006601!2.34e-08!102;UBERON:0000914!5.92e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.46e-09,95;UBERON:0000924,6.46e-09,95;UBERON:0006601,6.46e-09,95|phase1_expression=247.750266471116,6.63053274514786,6.3699893514535,0,2.00358291978539,1.17515490338323,1.63528848416868,36.9292705042908,21.3998857670533,25.5130333690973,4.96532107853964,4.06838010876216,28.4193211685802,32.083287687772,21.9852442798337,17.0079224607454,18.1886088313318,10.2525203741427,9.73512478600745,14.8536378129311,204.784242683776,19.9574811913779,14.1047886135025,2.07990149631429,3.44113921600755,3.44539178469012,3.87685796543167,1.29282739611533,3.04037471130198,2.52030129759931,2.66076612786366,0,0,0,4.33277429626912,1.82858109894342,1.42918549383658,375.004341140269,193.771165441902,243.438540947816,592.349108447231,519.797614053377,399.575020544639,2878.12715573967,2862.58040684543,2265.88465543596,2058.47162697969,556.4001990829,1887.54368205458,1530.35773561368,1204.02321239974,661.261796078869,1.8456086666351,39.8949178106239,35.9620365082436,786.184836525854,1138.11082343674,1522.77968849529,64.1343180924925,81.9936017871651,72.8906114032106,1600.36272496251,1409.53225183616,1290.90614444017,1223.22769049535,1350.62269851254,916.177137965282,894.844433093901,46.9713943757404,67.9079869808404,50.6883156856831,179.960120174396,194.806053119323,48.8738288867667,41.8844708349693,39.5264078242309,178.38772721901,197.021562665445,215.356359625253,74.5157525675595,77.1240835568313,75.5324387307302,178.118753362881,255.494224954383,305.13810081029,158.804807570307,134.683610035951,75.8645744508973,290.031320466095,450.104211996015,157.396417365011,53.346280372846,2.719885334831,7.01614149129162,7.14754059192436,1.34408066129201,150.135085120843,747.848255472517,478.525820478484,483.015198355635,240.9830912379,735.310715584041,652.301413649013,455.082690018132,153.27565703594,146.948721975557,138.008173489036,67.8252245531216,194.721288502673,215.389543783061,83.0994715209791,108.389710279122,105.621897743275,89.5292484882578,150.513545133702,103.172271481664,214.812426961171,453.897381371603,90.2302762988872,320.29836289587,224.37498275576,265.226763464966,83.876292548155,42.4532155666743,40.2137677081834,42.6613282198348,8.98613433794402,4.79922184794726,5.33694953706872,292.091746839404,177.052733290808,100.523481690292,177.474630916314,178.23367375924,250.17680564971,216.592086195456,360.409508666269,335.02797185298,91.7383613114239,152.570345517694,78.4626271065103,94.4897649221574,126.943801512771,138.497727591022,171.451977861346,157.579875950365,156.200774841068,233.609143777331,61.2213099929272,97.5787373665947,124.045542535584,159.355297474847,187.681893227279,268.850672555113,301.265047701229,94.3422424719658,2.80885274925294,2.57347907114715,2.27330799516474,63.7947379409346,91.2306373326464,92.3718375295006,103.930938921907,102.710928972145,123.56795742279,116.034438430454,133.86842729841,145.139320562392,165.711768862875,225.566095644677,234.613134825706,207.896382118823,240.626926358992,237.008535530817,189.471243656279,217.437445957428,5.61711931072457,33.056320832943,57.5878276445132,75.709155026503,89.8206205414991,73.2111194382733,70.271461854979,77.231604201699,65.9595395546871,93.8784041926862,99.2774074761064,107.834407846304,106.840319741278,65.6138168317582,60.5186539649144,61.7337947088538,121.956460312832,85.3436389194674,107.072348889426,96.1234267429883,93.0971938404603,113.339484942755,122.552408946811,96.9798672225986,88.8612799582181,94.1520360723338,29.0523574545406,18.3529616287703,21.6214894624523,10.793381394473,16.4316698324687,20.7412357387078,28.7727212513004,37.6881940060562,40.0474010134337,27.4561413188081,40.2550978276593,73.3117666906952,63.3436476422558,41.9280937392206,32.4709318474661,43.419916922703,564.236242768811,92.661300355767,93.0530015483968,91.4926012328264,85.1925601287263,116.919367694387,169.963159592614,191.230974900643,386.048467916062,406.387705505502,466.086288785835,453.409791818447,433.266619501532,480.668821666363,518.722016751097,230.616009939133,153.430453181939,236.477791583156,239.541480261786,193.868129623504,690.33005498118,333.766565764181,278.593757744555,296.343006921149,340.368968417822,465.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| ||
|EntrezGene=21858 | |||
|HGNC= | |||
|MCL_coexpression_id=487 | |||
|UniProt=Q6PI17,Q8BSJ3 | |||
|association_with_transcript=76bp_to_NM_011594,uc007mow.1_5end | |||
|description=CAGE_peak_1_at_Timp2_5end | |||
|id=chr11:118216631..118216648,- | |||
|ontology_enrichment_celltype=CL:0000055!2.80e-07!50;CL:0000333!4.04e-07!10;CL:0000095!4.04e-07!10;CL:0000243!4.04e-07!10;CL:0000123!4.04e-07!10;CL:0000125!4.04e-07!10;CL:0000030!4.04e-07!10;CL:0000339!4.04e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,4.04e-07,10;CL:0000095,4.04e-07,10;CL:0000243,4.04e-07,10;CL:0000123,4.04e-07,10;CL:0000125,4.04e-07,10;CL:0000030,4.04e-07,10;CL:0000339,4.04e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.34e-08!102;UBERON:0000924!2.34e-08!102;UBERON:0006601!2.34e-08!102;UBERON:0000914!5.92e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.46e-09,95;UBERON:0000924,6.46e-09,95;UBERON:0006601,6.46e-09,95 | |||
|phase1_expression=247.750266471116,6.63053274514786,6.3699893514535,0,2.00358291978539,1.17515490338323,1.63528848416868,36.9292705042908,21.3998857670533,25.5130333690973,4.96532107853964,4.06838010876216,28.4193211685802,32.083287687772,21.9852442798337,17.0079224607454,18.1886088313318,10.2525203741427,9.73512478600745,14.8536378129311,204.784242683776,19.9574811913779,14.1047886135025,2.07990149631429,3.44113921600755,3.44539178469012,3.87685796543167,1.29282739611533,3.04037471130198,2.52030129759931,2.66076612786366,0,0,0,4.33277429626912,1.82858109894342,1.42918549383658,375.004341140269,193.771165441902,243.438540947816,592.349108447231,519.797614053377,399.575020544639,2878.12715573967,2862.58040684543,2265.88465543596,2058.47162697969,556.4001990829,1887.54368205458,1530.35773561368,1204.02321239974,661.261796078869,1.8456086666351,39.8949178106239,35.9620365082436,786.184836525854,1138.11082343674,1522.77968849529,64.1343180924925,81.9936017871651,72.8906114032106,1600.36272496251,1409.53225183616,1290.90614444017,1223.22769049535,1350.62269851254,916.177137965282,894.844433093901,46.9713943757404,67.9079869808404,50.6883156856831,179.960120174396,194.806053119323,48.8738288867667,41.8844708349693,39.5264078242309,178.38772721901,197.021562665445,215.356359625253,74.5157525675595,77.1240835568313,75.5324387307302,178.118753362881,255.494224954383,305.13810081029,158.804807570307,134.683610035951,75.8645744508973,290.031320466095,450.104211996015,157.396417365011,53.346280372846,2.719885334831,7.01614149129162,7.14754059192436,1.34408066129201,150.135085120843,747.848255472517,478.525820478484,483.015198355635,240.9830912379,735.310715584041,652.301413649013,455.082690018132,153.27565703594,146.948721975557,138.008173489036,67.8252245531216,194.721288502673,215.389543783061,83.0994715209791,108.389710279122,105.621897743275,89.5292484882578,150.513545133702,103.172271481664,214.812426961171,453.897381371603,90.2302762988872,320.29836289587,224.37498275576,265.226763464966,83.876292548155,42.4532155666743,40.2137677081834,42.6613282198348,8.98613433794402,4.79922184794726,5.33694953706872,292.091746839404,177.052733290808,100.523481690292,177.474630916314,178.23367375924,250.17680564971,216.592086195456,360.409508666269,335.02797185298,91.7383613114239,152.570345517694,78.4626271065103,94.4897649221574,126.943801512771,138.497727591022,171.451977861346,157.579875950365,156.200774841068,233.609143777331,61.2213099929272,97.5787373665947,124.045542535584,159.355297474847,187.681893227279,268.850672555113,301.265047701229,94.3422424719658,2.80885274925294,2.57347907114715,2.27330799516474,63.7947379409346,91.2306373326464,92.3718375295006,103.930938921907,102.710928972145,123.56795742279,116.034438430454,133.86842729841,145.139320562392,165.711768862875,225.566095644677,234.613134825706,207.896382118823,240.626926358992,237.008535530817,189.471243656279,217.437445957428,5.61711931072457,33.056320832943,57.5878276445132,75.709155026503,89.8206205414991,73.2111194382733,70.271461854979,77.231604201699,65.9595395546871,93.8784041926862,99.2774074761064,107.834407846304,106.840319741278,65.6138168317582,60.5186539649144,61.7337947088538,121.956460312832,85.3436389194674,107.072348889426,96.1234267429883,93.0971938404603,113.339484942755,122.552408946811,96.9798672225986,88.8612799582181,94.1520360723338,29.0523574545406,18.3529616287703,21.6214894624523,10.793381394473,16.4316698324687,20.7412357387078,28.7727212513004,37.6881940060562,40.0474010134337,27.4561413188081,40.2550978276593,73.3117666906952,63.3436476422558,41.9280937392206,32.4709318474661,43.419916922703,564.236242768811,92.661300355767,93.0530015483968,91.4926012328264,85.1925601287263,116.919367694387,169.963159592614,191.230974900643,386.048467916062,406.387705505502,466.086288785835,453.409791818447,433.266619501532,480.668821666363,518.722016751097,230.616009939133,153.430453181939,236.477791583156,239.541480261786,193.868129623504,690.33005498118,333.766565764181,278.593757744555,296.343006921149,340.368968417822,465.750187209524,498.84623127048,502.177765619389,425.456047460314,380.224871142617,486.59925465217,182.510507727586,286.435091950286,284.014637849272,319.095553373656,507.118158017574,156.639263241156,73.5625327549594,69.8367416588575,65.6345677550525,137.905983975321,126.663280952898,167.203105679839,179.22212863241,170.762244246282,158.018378967908,112.797911175249,157.797381169726,131.750127426716,77.0661482454008,82.0134055182664,88.7355325030792,98.6011699051041,163.920943376303,165.700863746336,192.726312789541,83.5431280706809,399.515285649165,152.164594657924,552.368947353958,261.733835674063,199.575468587268,231.462975022082,247.360335915807,85.986846805806,281.661033753964,102.180786717116,187.812049846532,130.932530850386,78.1729096569468,65.6132293060921,74.1241281189133,30.2561605389062,29.5297564402918,29.4365944203423,207.16352410928,70.0684225782215,99.423219425029,105.953239346187,121.480299984406,131.235900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| |||
|short_description=p1@Timp2 | |||
}} | |||
Revision as of 18:59, 12 September 2013
| Short description: | p1@Timp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Timp2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:487 |
| Association with transcript: | 76bp_to_NM_011594, uc007mow.1_5end |
| EntrezGene: | Timp2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 4.04e-07 | 10 |
| neuron associated cell | 4.04e-07 | 10 |
| glial cell (sensu Vertebrata) | 4.04e-07 | 10 |
| neuron associated cell (sensu Vertebrata) | 4.04e-07 | 10 |
| glial cell | 4.04e-07 | 10 |
| glioblast | 4.04e-07 | 10 |
| glioblast (sensu Vertebrata) | 4.04e-07 | 10 |
| Ontology term | p-value | n |
|---|---|---|
| ectoderm-derived structure | 6.46e-09 | 95 |
| ectoderm | 6.46e-09 | 95 |
| presumptive ectoderm | 6.46e-09 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
