FFCP PHASE1:Mm9::chr11:120442510..120442551,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=192662|HGNC=|MCL_coexpression_id=1063|UniProt=Q99PT1|association_with_transcript=9bp_to_uc007mtj.1_5end|description=CAGE_peak_2_at_Arhgdia_5end|id=chr11:120442510..120442551,-|ontology_enrichment_celltype=CL:0000055!2.63e-11!50;CL:0002319!7.52e-09!43;CL:0000221!2.47e-08!44;CL:0000133!2.47e-08!44;CL:0000333!2.45e-07!10;CL:0000095!2.45e-07!10;CL:0000243!2.45e-07!10;CL:0000123!2.45e-07!10;CL:0000125!2.45e-07!10;CL:0000030!2.45e-07!10;CL:0000339!2.45e-07!10;CL:0000393!6.07e-07!39;CL:0000211!6.07e-07!39|ontology_enrichment_celltype_v019_2=CL:0002319,7.47e-09,43;CL:0000221,2.45e-08,44;CL:0000133,2.45e-08,44;CL:0000333,2.43e-07,10;CL:0000095,2.43e-07,10;CL:0000243,2.43e-07,10;CL:0000123,2.43e-07,10;CL:0000125,2.43e-07,10;CL:0000030,2.43e-07,10;CL:0000339,2.43e-07,10;CL:0000393,6.04e-07,39;CL:0000211,6.04e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.26e-10!75;UBERON:0001016!1.26e-10!75;UBERON:0001017!9.36e-10!73;UBERON:0005743!9.36e-10!73|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.25e-10,75;UBERON:0001017,9.29e-10,73|phase1_expression=1.60148847104794,14.3079917132138,12.2849794635175,13.6108895088074,5.50985302940982,3.86122325397347,3.73780224952841,2.58246646883153,3.09735188733667,3.04283884218592,0.513653904676515,1.59544317990673,2.22560948910567,4.10875891369288,0.666219523631325,0.607425802169478,0.699561878128147,1.10411757875383,0.822686601634433,1.69755860719212,2.8064285749853,1.58865521921416,1.30599894569468,11.0394771727451,10.0940083669555,13.2073351746455,10.3382879078178,9.48073423817912,10.0712412311878,4.53654233567875,8.86922042621219,0,0.61506478758457,0,0.866554859253824,2.32728503501889,0.612508068787107,5.4409111995798,5.4693474116666,9.42342739152837,3.52938892818609,8.87959130445979,3.88408282424923,11.2048167998264,11.5569701590247,10.8292583775392,85.2806565339363,11.1192829754028,19.1126978978991,13.6100929351998,16.5183977517928,14.3752564364972,2.34895648480831,5.07753499407941,3.02484419228218,23.4106086792712,20.057340795713,16.5015069528782,7.48570905180512,7.93486468908049,6.97214543856797,58.958948580029,38.239676232779,16.6481447697059,15.8218618010716,15.6305625288142,14.6804054154018,11.1423308543251,2.38486108309499,4.45519596494579,3.57552434297349,7.9982275633065,11.0434270475807,2.9397791811589,3.92966431174769,4.5960939330501,5.50579404996943,4.21368215681119,4.45458946443106,7.51751840062105,7.31901148819277,4.68822033501084,3.35019598801657,5.6276261003168,8.40390362772456,9.42811473515737,8.54230084794618,8.76077395378913,11.2832028066444,11.1090193356975,1.73918693221007,1.72084775396277,1.3599426674155,0.539703191637817,0.649776417447669,0,2.38755514223978,6.81721290312231,9.61208217030615,9.89350808628953,1.97180787687353,5.13305909657271,5.09610479413291,0,1.08245520505607,2.02687892380079,3.0331466700887,2.39786147410026,4.14300613835475,2.3750742250372,8.50078101154066,3.65358573974569,2.99800146432876,2.71300752994721,3.17489509266403,2.01066546127481,15.0788930317968,3.32578520915797,2.65383165584962,5.82360659810673,3.09178125844551,2.90925151881133,5.59175283654366,1.75668478206928,1.46612694769419,8.17462576667492,0.599075622529601,0,1.52484272487678,4.19413790333504,4.57500602818627,5.90575454930463,7.99591872884472,6.64860189058859,6.64921742590592,5.67844420737152,7.43427356107309,1.99051152976149,1.51633655060205,1.05220927943237,1.56144531555244,4.36813998423599,3.42118046630164,2.56198190320716,1.76894897793452,2.3060469651273,1.87403449119458,1.55222022443409,1.72454394346274,3.9712276835242,3.51902248327898,6.57587197282724,7.50727572909114,7.66154766348766,4.7329891373827,4.37875387000685,3.51106593656617,1.54408744268829,0.852490498186778,4.76389276831654,3.04883877975425,3.06105504483725,3.07768156260773,3.54175617145327,2.00547246753592,2.32533944750408,1.87791380979733,1.86824547787471,2.13927804887525,2.29834449710733,1.13496333364198,1.75439984910399,1.3173006917463,0.805238512562231,3.78521907415429,6.07137213037778,18.5034518470927,11.6358249331959,3.19932375802851,5.10920678092965,6.05677068213839,5.64713868945359,5.11469500843202,6.65789691393957,9.01605216934572,10.7054320570607,5.27803938480566,5.96869416123452,7.01870713628832,6.29173586057955,7.3486936957396,6.17337947088538,4.36236172192088,4.11294645395024,3.38123207019241,3.05476991767971,2.52138233317913,1.47285221769669,1.96033265085198,1.91893192373483,1.72698600625512,1.72756029490521,0.889357881261447,1.66845105716094,3.14494392181125,1.79889689907883,2.43432145666204,2.17059443777175,1.52775511068852,0.575392274901621,1.78348749452539,1.64736847912849,0,2.23284568601102,1.5601883655728,1.26289438973556,0.538192240565737,0.482443521363367,7.944387177164,5.49525094134406,5.37784422258685,3.73439188705414,3.52035372432753,4.18765643604539,3.80869825417622,5.46374214001837,4.57141917907954,4.4292937929755,3.34855014180723,7.37384916220821,6.90739927463582,2.89298117163023,1.5079128393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| ||
|EntrezGene=192662 | |||
|HGNC= | |||
|MCL_coexpression_id=1063 | |||
|UniProt=Q99PT1 | |||
|association_with_transcript=9bp_to_uc007mtj.1_5end | |||
|description=CAGE_peak_2_at_Arhgdia_5end | |||
|id=chr11:120442510..120442551,- | |||
|ontology_enrichment_celltype=CL:0000055!2.63e-11!50;CL:0002319!7.52e-09!43;CL:0000221!2.47e-08!44;CL:0000133!2.47e-08!44;CL:0000333!2.45e-07!10;CL:0000095!2.45e-07!10;CL:0000243!2.45e-07!10;CL:0000123!2.45e-07!10;CL:0000125!2.45e-07!10;CL:0000030!2.45e-07!10;CL:0000339!2.45e-07!10;CL:0000393!6.07e-07!39;CL:0000211!6.07e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.47e-09,43;CL:0000221,2.45e-08,44;CL:0000133,2.45e-08,44;CL:0000333,2.43e-07,10;CL:0000095,2.43e-07,10;CL:0000243,2.43e-07,10;CL:0000123,2.43e-07,10;CL:0000125,2.43e-07,10;CL:0000030,2.43e-07,10;CL:0000339,2.43e-07,10;CL:0000393,6.04e-07,39;CL:0000211,6.04e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.26e-10!75;UBERON:0001016!1.26e-10!75;UBERON:0001017!9.36e-10!73;UBERON:0005743!9.36e-10!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.25e-10,75;UBERON:0001017,9.29e-10,73 | |||
|phase1_expression=1.60148847104794,14.3079917132138,12.2849794635175,13.6108895088074,5.50985302940982,3.86122325397347,3.73780224952841,2.58246646883153,3.09735188733667,3.04283884218592,0.513653904676515,1.59544317990673,2.22560948910567,4.10875891369288,0.666219523631325,0.607425802169478,0.699561878128147,1.10411757875383,0.822686601634433,1.69755860719212,2.8064285749853,1.58865521921416,1.30599894569468,11.0394771727451,10.0940083669555,13.2073351746455,10.3382879078178,9.48073423817912,10.0712412311878,4.53654233567875,8.86922042621219,0,0.61506478758457,0,0.866554859253824,2.32728503501889,0.612508068787107,5.4409111995798,5.4693474116666,9.42342739152837,3.52938892818609,8.87959130445979,3.88408282424923,11.2048167998264,11.5569701590247,10.8292583775392,85.2806565339363,11.1192829754028,19.1126978978991,13.6100929351998,16.5183977517928,14.3752564364972,2.34895648480831,5.07753499407941,3.02484419228218,23.4106086792712,20.057340795713,16.5015069528782,7.48570905180512,7.93486468908049,6.97214543856797,58.958948580029,38.239676232779,16.6481447697059,15.8218618010716,15.6305625288142,14.6804054154018,11.1423308543251,2.38486108309499,4.45519596494579,3.57552434297349,7.9982275633065,11.0434270475807,2.9397791811589,3.92966431174769,4.5960939330501,5.50579404996943,4.21368215681119,4.45458946443106,7.51751840062105,7.31901148819277,4.68822033501084,3.35019598801657,5.6276261003168,8.40390362772456,9.42811473515737,8.54230084794618,8.76077395378913,11.2832028066444,11.1090193356975,1.73918693221007,1.72084775396277,1.3599426674155,0.539703191637817,0.649776417447669,0,2.38755514223978,6.81721290312231,9.61208217030615,9.89350808628953,1.97180787687353,5.13305909657271,5.09610479413291,0,1.08245520505607,2.02687892380079,3.0331466700887,2.39786147410026,4.14300613835475,2.3750742250372,8.50078101154066,3.65358573974569,2.99800146432876,2.71300752994721,3.17489509266403,2.01066546127481,15.0788930317968,3.32578520915797,2.65383165584962,5.82360659810673,3.09178125844551,2.90925151881133,5.59175283654366,1.75668478206928,1.46612694769419,8.17462576667492,0.599075622529601,0,1.52484272487678,4.19413790333504,4.57500602818627,5.90575454930463,7.99591872884472,6.64860189058859,6.64921742590592,5.67844420737152,7.43427356107309,1.99051152976149,1.51633655060205,1.05220927943237,1.56144531555244,4.36813998423599,3.42118046630164,2.56198190320716,1.76894897793452,2.3060469651273,1.87403449119458,1.55222022443409,1.72454394346274,3.9712276835242,3.51902248327898,6.57587197282724,7.50727572909114,7.66154766348766,4.7329891373827,4.37875387000685,3.51106593656617,1.54408744268829,0.852490498186778,4.76389276831654,3.04883877975425,3.06105504483725,3.07768156260773,3.54175617145327,2.00547246753592,2.32533944750408,1.87791380979733,1.86824547787471,2.13927804887525,2.29834449710733,1.13496333364198,1.75439984910399,1.3173006917463,0.805238512562231,3.78521907415429,6.07137213037778,18.5034518470927,11.6358249331959,3.19932375802851,5.10920678092965,6.05677068213839,5.64713868945359,5.11469500843202,6.65789691393957,9.01605216934572,10.7054320570607,5.27803938480566,5.96869416123452,7.01870713628832,6.29173586057955,7.3486936957396,6.17337947088538,4.36236172192088,4.11294645395024,3.38123207019241,3.05476991767971,2.52138233317913,1.47285221769669,1.96033265085198,1.91893192373483,1.72698600625512,1.72756029490521,0.889357881261447,1.66845105716094,3.14494392181125,1.79889689907883,2.43432145666204,2.17059443777175,1.52775511068852,0.575392274901621,1.78348749452539,1.64736847912849,0,2.23284568601102,1.5601883655728,1.26289438973556,0.538192240565737,0.482443521363367,7.944387177164,5.49525094134406,5.37784422258685,3.73439188705414,3.52035372432753,4.18765643604539,3.80869825417622,5.46374214001837,4.57141917907954,4.4292937929755,3.34855014180723,7.37384916220821,6.90739927463582,2.89298117163023,1.50791283939272,8.15858525728064,2.45882136509518,1.10374698521893,4.17431533968259,4.80567915028033,7.54100748732707,1.51482556322624,5.04813151066011,7.02789739733949,4.95473814785438,8.36390792833932,7.5751549188014,7.64306633129848,8.09621403349789,8.47541987942804,5.92931666919785,1.60660658210904,3.12268187458191,11.5742642383716,6.02681749608232,4.78413356620353,2.65490276679926,3.8844901784797,2.72091201268276,3.20628635585027,6.79194353625777,7.68587869859819,5.94385074286909,4.72593848320757,2.13898427030833,0.948110273807448,3.16255825724996,1.03135543248187,3.40439605753788,3.78128297465751,4.78627129996192,5.78709994585299,7.98031051390231,6.42127743367454,5.92376474167636,6.39376393140658,12.6722722354404,8.26145076368899,4.85162475720916,2.14352128823924,3.87514624070173,3.98065304525829,2.26807453605959,1.96969079694074,7.28702091574627,6.67531087237835,1.36696704638282,6.81076664278634,3.88908507476395,1.88368457004691,1.6403307326523,1.83022538565218,1.35982743995084,1.53946597556024,0.967399816630967,3.81868247206045,4.4287039101359,5.28630614529807,5.18425635944646,4.39085421630384,4.14888871117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| |||
|short_description=p2@Arhgdia | |||
}} |
Revision as of 19:06, 12 September 2013
Short description: | p2@Arhgdia |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgdia_5end |
Coexpression cluster: | MCL_coexpression_mm9:1063 |
Association with transcript: | 9bp_to_uc007mtj.1_5end |
EntrezGene: | Arhgdia |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.47e-09 | 43 |
ectodermal cell | 2.45e-08 | 44 |
neurectodermal cell | 2.45e-08 | 44 |
migratory neural crest cell | 2.43e-07 | 10 |
neuron associated cell | 2.43e-07 | 10 |
glial cell (sensu Vertebrata) | 2.43e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.43e-07 | 10 |
glial cell | 2.43e-07 | 10 |
glioblast | 2.43e-07 | 10 |
glioblast (sensu Vertebrata) | 2.43e-07 | 10 |
electrically responsive cell | 6.04e-07 | 39 |
electrically active cell | 6.04e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.25e-10 | 75 |
central nervous system | 9.29e-10 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.