FFCP PHASE1:Mm9::chr11:30098232..30098261,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20742|HGNC=|UniProt=F6VV16,Q62261,Q3TTX2,Q3TZN6,Q8C509|association_with_transcript=0bp_to_ENSMUST00000039018,ENSMUST00000102838,NM_009260,uc007iht.1,uc011xss.1_5end|description=CAGE_peak_3_at_Spnb2_5end|id=chr11:30098232..30098261,-|ontology_enrichment_celltype=CL:0000542!3.09e-08!13;CL:0000051!3.09e-08!13;CL:0000838!4.33e-08!12;CL:0000084!1.71e-07!11;CL:0000827!1.71e-07!11|ontology_enrichment_celltype_v019_2=CL:0000542,2.77e-08,13;CL:0000051,2.77e-08,13;CL:0000838,3.88e-08,12;CL:0000084,1.54e-07,11;CL:0000827,1.54e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.41e-22!130;UBERON:0000925!3.41e-22!130;UBERON:0006595!3.41e-22!130;UBERON:0001007!4.41e-22!128;UBERON:0001555!4.41e-22!128;UBERON:0007026!4.41e-22!128;UBERON:0004921!1.87e-21!126;UBERON:0004185!1.87e-21!126;UBERON:0000077!5.72e-12!97;UBERON:0001041!5.94e-12!92;UBERON:0005409!8.01e-12!59;UBERON:0004177!2.30e-10!29;UBERON:0003104!6.59e-10!131;UBERON:0009142!6.59e-10!131;UBERON:0000160!4.89e-09!43;UBERON:0003408!4.98e-09!24;UBERON:0005057!5.48e-09!51;UBERON:0002370!1.12e-08!23;UBERON:0000974!1.12e-08!23;UBERON:0004807!1.12e-08!23;UBERON:0005058!1.12e-08!23;UBERON:0003351!1.12e-08!23;UBERON:0009113!1.12e-08!23;UBERON:0003295!1.12e-08!23;UBERON:0009722!1.12e-08!23;UBERON:0005562!1.12e-08!23;UBERON:0007690!1.12e-08!23;UBERON:0000072!1.44e-08!27;UBERON:0000949!2.22e-08!72;UBERON:0006562!2.24e-08!24;UBERON:0001557!2.24e-08!24;UBERON:0001042!2.24e-08!24;UBERON:0008814!2.24e-08!24;UBERON:0009145!2.24e-08!24;UBERON:0002193!2.47e-08!48;UBERON:0002405!2.84e-08!70;UBERON:0001004!2.88e-08!42;UBERON:0005911!4.89e-08!69;UBERON:0000065!6.16e-08!41;UBERON:0003929!8.45e-08!55;UBERON:0002368!1.79e-07!60;UBERON:0002390!2.06e-07!45;UBERON:0003061!2.06e-07!45;UBERON:0002530!3.63e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.96e-21,118;UBERON:0000925,4.96e-21,118;UBERON:0006595,4.96e-21,118;UBERON:0001007,6.04e-21,116;UBERON:0001555,6.04e-21,116;UBERON:0007026,6.04e-21,116;UBERON:0004921,2.40e-20,114;UBERON:0005409,2.69e-11,47;UBERON:0001041,3.73e-11,80;UBERON:0004177,1.02e-10,29;UBERON:0005057,1.02e-10,29;UBERON:0000077,1.66e-09,35;UBERON:0003408,2.24e-09,24;UBERON:0002370,5.08e-09,23;UBERON:0000974,5.08e-09,23;UBERON:0004807,5.08e-09,23;UBERON:0005058,5.08e-09,23;UBERON:0003351,5.08e-09,23;UBERON:0009113,5.08e-09,23;UBERON:0003295,5.08e-09,23;UBERON:0009722,5.08e-09,23;UBERON:0005562,5.08e-09,23;UBERON:0007690,5.08e-09,23;UBERON:0000072,6.90e-09,27;UBERON:0002193,9.20e-09,48;UBERON:0002405,9.20e-09,48;UBERON:0006562,1.05e-08,24;UBERON:0001557,1.05e-08,24;UBERON:0001042,1.05e-08,24;UBERON:0008814,1.05e-08,24;UBERON:0009145,1.05e-08,24;UBERON:0000160,1.07e-08,31;UBERON:0007811,1.26e-08,36;UBERON:0000949,1.33e-08,72;UBERON:0001004,1.57e-08,42;UBERON:0005911,2.95e-08,69;UBERON:0000153,2.97e-08,43;UBERON:0000065,3.39e-08,41;UBERON:0003929,4.97e-08,55;UBERON:0002390,8.07e-08,45;UBERON:0003061,8.07e-08,45;UBERON:0002368,1.09e-07,60;UBERON:0002530,2.26e-07,65|phase1_expression=24.8230713012431,11.1672130444596,5.0049916332849,8.16653370528441,7.01254021924886,5.70789524500425,8.87728034262997,57.0725089611767,68.000952799255,60.1545832647523,15.4096171402954,11.4871908953284,113.163682484527,109.100662218909,11.9919514253639,14.9831697868471,3.49780939064073,60.2532735834234,63.6210971930628,33.5267824920444,5.44277056966847,74.468213400664,53.2847569843428,14.5593104742,10.0940083669555,8.6134794617253,3.4460959692726,6.03319451520489,15.3918969759663,16.1299283046356,9.5344119581781,0,0,0,10.6875099307972,9.97407872150954,9.59595974433135,14.2300754450549,5.4693474116666,12.5645698553712,9.41170380849623,12.9778642142105,11.6522484727477,0,0,0,0,0,0.439372365468944,0.194429899074283,1.25987779462826,0,60.5695207868428,131.290547704053,135.445801054413,0.771778308107841,0,0.515672092277442,1.41621522601718,0,1.26766280701236,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,0.384218305321555,1.97010263386108,0.540023753326763,0.420649922702764,0,0,0.61245399607477,0.575072826109418,0,2.20231761998777,1.14918604276669,0.153606533256243,0.791317726381163,0.823388792421687,0.52091337055676,0.558365998002762,0,0.763991238884051,1.76777151284201,0.284743361598206,0.559198337475902,0.757261933331841,0.529000920747499,2.6087803983151,1.72084775396277,4.75979933595425,4.31762553310254,11.0461990966104,7.6164570806547,8.84799846830037,0,0,0,19.0138616698519,0,0,0,10.8245520505607,9.62767488805375,8.08839112023653,7.9928715803342,85.1905637199195,2.07818994690755,5.37804512975021,4.87144765299426,3.92046345335299,3.46662073271032,2.70454026412121,1.75933227861546,16.8092578059374,2.60278842455841,18.5768215909474,1.94120219936891,13.9130156630048,7.75800405016355,44.7340226923493,0.292780797011547,0.209446706813455,16.3492515333498,21.2072770375479,10.1983464268879,21.601938602421,0.299581278809645,0,1.88481528169297,0,0,0.20778804455956,0.324482526135515,1.83310854930569,14.9288364732112,2.52722758433675,7.78634866779954,14.053007839972,3.67843367093557,7.02242306240862,6.0281927134286,5.44291993210623,3.97152532883034,4.68508622798644,9.31332134660456,15.5208954911646,9.8335161687266,5.63043597324636,4.16471891612392,6.67313398141435,4.179025998266,6.79081050146213,2.9855140022774,14.0442637462647,15.4408744268829,16.76564646434,5.59239585845855,7.50483391939508,2.34080679899319,3.07768156260773,1.77087808572663,0.925602677324269,1.86027155800326,1.07309360559848,1.05088808130453,0.658239399653922,0.985004784474571,1.86458261955468,1.46199987425332,0.439100230582101,0.805238512562231,0.420579897128254,0.514523061896422,12.5559137533843,16.1314845664762,12.797295032114,11.3795969211615,17.1393723558384,22.386871233191,22.9049385160216,26.2511364035332,15.1849299694244,18.7756808385372,15.3314477368164,17.7071260116624,17.3518037536017,19.7740269903929,21.8299430373441,17.3252907731299,6.44870863240478,12.7958334122896,19.1603150644237,9.9789150644204,9.30971938404604,7.36426108848345,6.76630947229553,7.97094799089852,6.12295038581362,7.15703550746443,6.52195779591728,6.84064933435986,7.66580080941492,7.19558759631532,8.72298521970563,10.6117950291063,8.65727896056827,9.49397253587675,6.97181475132652,8.51140380883053,18.6898668485561,8.18710084870708,8.42501717409313,6.56705082662491,5.9201146462231,4.3419916922703,20.6923572986597,6.63219941196697,5.86673915191293,4.92260748748046,5.16318546234705,7.20276906999808,8.09348379012447,4.68320754858717,6.46304090835383,4.4292937929755,6.05928120898451,12.6174752331118,11.569893785015,8.82359257347221,0,1.08781136763742,3.44234991113325,3.31124095565679,0.321101179975584,0.117211686592203,0,1.51482556322624,1.26203287766503,0.780877488593277,1.29254038639679,1.43381278771531,0.222798674082394,1.13230612315533,1.21443210502468,0.876767573733936,1.18586333383957,0,6.81312408999689,2.31485284767432,3.09485222771795,11.8778488540226,9.2921596837974,11.1679092631291,12.9999129494843,9.43025398779491,8.85905678642318,8.30074899448604,7.23599220871019,6.90714086007261,4.27796854061666,10.4292130118819,6.32511651449993,8.25084345985495,6.12791290356818,14.9450708045987,13.0652270620582,23.5770738534752,25.3596534108451,15.8748247665843,15.9612549984057,9.13394847343798,8.21350978222986,6.35496212591461,6.17479514553893,11.2122652000206,9.04200789497071,13.6910339586914,18.5027133204862,23.6362895632888,21.2781010739791,0.556275906031529,23.5801815501037,7.63631411463923,9.63011542322501,13.1857919903284,28.4323993659732,27.4533807847827,41.4747369185007,42.2653386017447,38.8341926390431,1.90934123603023,11.8625997592926,12.1991680276109,14.4727156701214,11.7089445768102,11.5732158785474,7.55240339754996,6.28166263512553,7.59092231753686,25.5341497384832,16.776161453347,8.45539408026285,3.73791365109947,4.13646226142744,2.52786544847262,1.6790777052105,2.19642963138012,1.5256441023948,4.03633593016245,2.9360616439199,1.20792060413003,15.5536203379247,79.0027801570446,32.0305840158459,36.9759445793378,46.901417094984,57.4675693092615,58.8096810152544,57.5736203200651,62.3249804676716,62.1953331680589,62.7944086837199,61.9072776740201,79.8180043258572,73.4096351715714,84.3851233750928,5.44152920676507,6.21560669447381,4.12683740403588,7.21903850365537,3.86379188064381,6.00583921443782,18.1320108024592,10.9327873330324,5.517293144389,0,0,0,0,0,0,0,0.45032120322422,0,0,3.00983307994112,6.78342284781753,5.29274177837816,3.64660075602441,1.25767897576789,2.02227859295016,4.66718128383392,3.7086310303001,4.81378814387723,4.04315538822076,3.54871019846336,4.14977951049368,3.7456602987953,3.9695594491019,3.4461281373368,3.33405583898152,4.51948871184936,3.6652751888104,4.53294490883637,3.82717192349433,2.74295401908332,4.43689515398344,2.86123427936785,4.50573891560218,3.95259397744389,4.06150117880047,2.37806364734604,4.20911538300549,5.02475221229689,2.24456908663095,3.79632057997357,4.53120618927592,2.86461730218783,3.71848418846318,4.43685205256625,3.99696924700713,5.84829021113521,6.44613162144895,1.3390183244819,2.8676884485537,3.70988536992674|short_description=p3@Spnb2}} | ||
|EntrezGene=20742 | |||
|HGNC= | |||
|UniProt=F6VV16,Q62261,Q3TTX2,Q3TZN6,Q8C509 | |||
|association_with_transcript=0bp_to_ENSMUST00000039018,ENSMUST00000102838,NM_009260,uc007iht.1,uc011xss.1_5end | |||
|description=CAGE_peak_3_at_Spnb2_5end | |||
|id=chr11:30098232..30098261,- | |||
|ontology_enrichment_celltype=CL:0000542!3.09e-08!13;CL:0000051!3.09e-08!13;CL:0000838!4.33e-08!12;CL:0000084!1.71e-07!11;CL:0000827!1.71e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.77e-08,13;CL:0000051,2.77e-08,13;CL:0000838,3.88e-08,12;CL:0000084,1.54e-07,11;CL:0000827,1.54e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.41e-22!130;UBERON:0000925!3.41e-22!130;UBERON:0006595!3.41e-22!130;UBERON:0001007!4.41e-22!128;UBERON:0001555!4.41e-22!128;UBERON:0007026!4.41e-22!128;UBERON:0004921!1.87e-21!126;UBERON:0004185!1.87e-21!126;UBERON:0000077!5.72e-12!97;UBERON:0001041!5.94e-12!92;UBERON:0005409!8.01e-12!59;UBERON:0004177!2.30e-10!29;UBERON:0003104!6.59e-10!131;UBERON:0009142!6.59e-10!131;UBERON:0000160!4.89e-09!43;UBERON:0003408!4.98e-09!24;UBERON:0005057!5.48e-09!51;UBERON:0002370!1.12e-08!23;UBERON:0000974!1.12e-08!23;UBERON:0004807!1.12e-08!23;UBERON:0005058!1.12e-08!23;UBERON:0003351!1.12e-08!23;UBERON:0009113!1.12e-08!23;UBERON:0003295!1.12e-08!23;UBERON:0009722!1.12e-08!23;UBERON:0005562!1.12e-08!23;UBERON:0007690!1.12e-08!23;UBERON:0000072!1.44e-08!27;UBERON:0000949!2.22e-08!72;UBERON:0006562!2.24e-08!24;UBERON:0001557!2.24e-08!24;UBERON:0001042!2.24e-08!24;UBERON:0008814!2.24e-08!24;UBERON:0009145!2.24e-08!24;UBERON:0002193!2.47e-08!48;UBERON:0002405!2.84e-08!70;UBERON:0001004!2.88e-08!42;UBERON:0005911!4.89e-08!69;UBERON:0000065!6.16e-08!41;UBERON:0003929!8.45e-08!55;UBERON:0002368!1.79e-07!60;UBERON:0002390!2.06e-07!45;UBERON:0003061!2.06e-07!45;UBERON:0002530!3.63e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.96e-21,118;UBERON:0000925,4.96e-21,118;UBERON:0006595,4.96e-21,118;UBERON:0001007,6.04e-21,116;UBERON:0001555,6.04e-21,116;UBERON:0007026,6.04e-21,116;UBERON:0004921,2.40e-20,114;UBERON:0005409,2.69e-11,47;UBERON:0001041,3.73e-11,80;UBERON:0004177,1.02e-10,29;UBERON:0005057,1.02e-10,29;UBERON:0000077,1.66e-09,35;UBERON:0003408,2.24e-09,24;UBERON:0002370,5.08e-09,23;UBERON:0000974,5.08e-09,23;UBERON:0004807,5.08e-09,23;UBERON:0005058,5.08e-09,23;UBERON:0003351,5.08e-09,23;UBERON:0009113,5.08e-09,23;UBERON:0003295,5.08e-09,23;UBERON:0009722,5.08e-09,23;UBERON:0005562,5.08e-09,23;UBERON:0007690,5.08e-09,23;UBERON:0000072,6.90e-09,27;UBERON:0002193,9.20e-09,48;UBERON:0002405,9.20e-09,48;UBERON:0006562,1.05e-08,24;UBERON:0001557,1.05e-08,24;UBERON:0001042,1.05e-08,24;UBERON:0008814,1.05e-08,24;UBERON:0009145,1.05e-08,24;UBERON:0000160,1.07e-08,31;UBERON:0007811,1.26e-08,36;UBERON:0000949,1.33e-08,72;UBERON:0001004,1.57e-08,42;UBERON:0005911,2.95e-08,69;UBERON:0000153,2.97e-08,43;UBERON:0000065,3.39e-08,41;UBERON:0003929,4.97e-08,55;UBERON:0002390,8.07e-08,45;UBERON:0003061,8.07e-08,45;UBERON:0002368,1.09e-07,60;UBERON:0002530,2.26e-07,65 | |||
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| |||
|short_description=p3@Spnb2 | |||
}} |
Revision as of 19:23, 12 September 2013
Short description: | p3@Spnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Spnb2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000039018, ENSMUST00000102838, NM_009260, uc007iht.1, uc011xss.1_5end |
EntrezGene: | Spnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.77e-08 | 13 |
common lymphoid progenitor | 2.77e-08 | 13 |
lymphoid lineage restricted progenitor cell | 3.88e-08 | 12 |
T cell | 1.54e-07 | 11 |
pro-T cell | 1.54e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.