FFCP PHASE1:Mm9::chr11:45666336..45666339,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:45666336..45666339,+|id=chr11:45666336..45666339,+|ontology_enrichment_celltype=CL:0000945!8.98e-07!1;CL:0000236!8.98e-07!1;CL:0000826!8.98e-07!1|ontology_enrichment_celltype_v019_2=CL:0000355,1.89e-07,9|ontology_enrichment_disease=DOID:0060100!6.33e-18!3;DOID:4045!6.33e-18!3;DOID:0050686!3.09e-09!6|ontology_enrichment_disease_v019_2=DOID:0060100,2.49e-20,3;DOID:4045,2.49e-20,3;DOID:0050686,1.07e-10,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.89e-07,9;UBERON:0002036,1.89e-07,9;UBERON:0002385,1.89e-07,9;UBERON:0000486,1.89e-07,9;UBERON:0007503,1.89e-07,9;UBERON:0001015,1.89e-07,9;UBERON:0002329,1.89e-07,9;UBERON:0003082,1.89e-07,9;UBERON:0003059,1.89e-07,9;UBERON:0007282,1.89e-07,9;UBERON:0004290,1.89e-07,9;UBERON:0009618,1.89e-07,9;UBERON:0000383,8.53e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,2.09409497589519,11.7646297606203,2.04913645487534,2.91306211818692,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:45666336..45666339,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:45666336..45666339,+ | |||
|id=chr11:45666336..45666339,+ | |||
|ontology_enrichment_celltype=CL:0000945!8.98e-07!1;CL:0000236!8.98e-07!1;CL:0000826!8.98e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.89e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.33e-18!3;DOID:4045!6.33e-18!3;DOID:0050686!3.09e-09!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.49e-20,3;DOID:4045,2.49e-20,3;DOID:0050686,1.07e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.89e-07,9;UBERON:0002036,1.89e-07,9;UBERON:0002385,1.89e-07,9;UBERON:0000486,1.89e-07,9;UBERON:0007503,1.89e-07,9;UBERON:0001015,1.89e-07,9;UBERON:0002329,1.89e-07,9;UBERON:0003082,1.89e-07,9;UBERON:0003059,1.89e-07,9;UBERON:0007282,1.89e-07,9;UBERON:0004290,1.89e-07,9;UBERON:0009618,1.89e-07,9;UBERON:0000383,8.53e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,2.09409497589519,11.7646297606203,2.04913645487534,2.91306211818692,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:45666336..45666339,+ | |||
}} |
Revision as of 19:42, 12 September 2013
Short description: | p@chr11:45666336..45666339, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:45666336..45666339, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.89e-07 | 9 |
striated muscle tissue | 1.89e-07 | 9 |
muscle tissue | 1.89e-07 | 9 |
multilaminar epithelium | 1.89e-07 | 9 |
epithelial vesicle | 1.89e-07 | 9 |
musculature | 1.89e-07 | 9 |
somite | 1.89e-07 | 9 |
myotome | 1.89e-07 | 9 |
presomitic mesoderm | 1.89e-07 | 9 |
presumptive segmental plate | 1.89e-07 | 9 |
dermomyotome | 1.89e-07 | 9 |
trunk paraxial mesoderm | 1.89e-07 | 9 |
musculature of body | 8.53e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.49e-20 | 3 |
muscle cancer | 2.49e-20 | 3 |
organ system cancer | 1.07e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.