FFCP PHASE1:Mm9::chr11:53113875..53114017,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15525|HGNC=|UniProt=Q3U2G2|association_with_transcript=0bp_to_ENSMUST00000020630,ENSMUST00000151854,NM_008300,uc007ivq.1,uc007ivr.1,uc007ivs.1_5end|description=CAGE_peak_1_at_Hspa4_5end|id=chr11:53113875..53114017,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005423,1.17e-07,304;UBERON:0002050,6.98e-07,294|phase1_expression=95.7690105686668,86.1969256869222,75.0748744992734,73.1963391362529,82.6477954411473,97.2020984369842,89.0064160668953,97.3589858749485,269.891980364745,222.127235479572,224.980410248314,257.903390031923,90.9075875934702,100.533462781847,121.918172824533,89.8990187210827,71.3553115690709,110.411757875383,107.497715946899,100.580347476133,79.7706061617035,128.184618000343,112.83830890802,89.1157794959275,89.9284381783307,86.7090265813681,92.6138291742011,89.2050903319581,81.330023527328,87.7064851564559,86.9183601768794,85.7291409170502,87.339199837009,95.0890086092632,82.3227116291133,127.834442280681,101.268000706135,75.7542251633803,75.7895284188086,73.2933241563318,99.4111214772414,89.4789585295564,68.9424701304238,173.35991835237,161.898959157565,311.478838418374,50.8554373826225,57.3406161280574,47.2325292879114,71.9390626574849,61.5940255151595,41.6882436658418,120.300128543397,118.95939128986,93.0979823624625,144.322543616166,132.091915811767,150.576250945013,93.2678884562746,116.378015439847,96.9762047364454,51.8432134065772,51.5790981744461,42.2952867122258,58.3431153914515,46.1812074714965,44.3408163567239,48.7957247758374,102.756405797701,90.0489608672377,108.948329980016,103.405656354177,97.6238951006132,112.324062880113,93.1617978297257,105.710160460152,211.422491518826,144.797441388603,150.227189524606,100.101692387217,91.5791312460121,94.8062334413303,138.753950503686,118.180148106653,140.574387954665,142.600235369255,118.026123382456,120.600441448969,151.528112859701,125.29764665705,71.5965287093144,86.90281157512,171.352776094353,136.544907484368,116.309978723133,104.838291580777,97.7493164116993,78.5683787084846,54.5550609666024,61.8344255393095,103.801600375414,84.6954750934498,73.8935195149272,92.4386714099331,149.378818297738,156.069677132661,171.372786860012,97.056297761201,106.941345946282,130.480640237981,142.604938601764,130.615690195909,131.912064430465,105.355125746283,104.536360643642,137.981917279984,124.833458705859,115.390286822089,67.2304019481904,117.928033611661,95.40353597489,103.278428917802,104.379386282148,125.895742714965,90.0620839297857,102.949193249062,162.349493705522,85.7860905320573,138.252407055494,144.098595107439,117.120154321568,100.649136042404,143.057415518244,131.949175982451,141.91923443418,141.79886392122,74.5464143384315,81.1133448377806,105.385390266842,129.000857658409,129.339720304927,118.399583783239,101.194916950606,90.422890701429,89.3319233856935,91.7294237239525,94.4513383562067,112.277262900733,153.699978961116,130.861407476131,113.664426209911,107.844300354367,91.1994977459961,86.7147894640195,87.8689722461919,128.974204898384,91.2877143507205,76.9470242272998,127.305247729225,123.032708886088,122.657129370113,107.136926569304,105.588152071004,96.2177093244805,103.513232747431,106.965614585188,118.576843418632,96.9152341647507,122.761648035456,115.409727247604,131.817884321561,132.749588582202,146.879027129713,120.383157628053,135.216436926734,124.823294816072,129.193744146665,144.918910531622,135.011462588803,124.943329460916,134.79536454291,124.035367643356,112.745668229349,102.912063726895,113.886974770683,114.301074578464,109.582151036918,111.415624343044,119.70794949114,113.251245490432,102.017159540856,91.8041269702633,94.4546146746347,112.991778971022,127.359741310581,107.731552430171,95.0367187121366,93.8417270132462,105.921199683131,107.60779787713,118.220042064555,104.394000677843,114.727166682727,134.477155207172,139.163768540148,111.306745630503,100.821480330086,85.3767145523556,80.4617691629287,80.554918486227,79.7705315733174,107.628073969728,117.889929352431,96.0123644984739,101.724281435347,125.02654458382,137.418418757785,108.067348785394,96.256412076801,129.991108474553,117.986642944027,110.334305753872,97.3964530397284,76.2153471360262,77.6022269288405,76.4923899602571,80.3939234941574,77.2911766874224,87.5406679929604,77.9989378046913,90.4869304977293,77.0979482239457,102.538073078705,126.730024329759,97.8610903307882,94.922240728828,142.087272139196,140.536812224052,138.361093897914,103.765551080997,141.032174079067,129.625663106484,115.46694118478,129.999026086188,122.762069419399,138.424423555739,129.134613834291,135.89897392876,126.887376720834,122.102100240287,132.855919754939,79.9514560465976,80.9548187987273,117.458727556445,49.1157011857862,120.419195532871,107.324862722487,88.2671773257603,69.6912467198624,81.1628790571968,86.5734782113541,71.6161447070686,72.7254651904831,75.53278514666,78.0097703454991,55.6931933540209,1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| ||
|EntrezGene=15525 | |||
|HGNC= | |||
|UniProt=Q3U2G2 | |||
|association_with_transcript=0bp_to_ENSMUST00000020630,ENSMUST00000151854,NM_008300,uc007ivq.1,uc007ivr.1,uc007ivs.1_5end | |||
|description=CAGE_peak_1_at_Hspa4_5end | |||
|id=chr11:53113875..53114017,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,1.17e-07,304;UBERON:0002050,6.98e-07,294 | |||
|phase1_expression=95.7690105686668,86.1969256869222,75.0748744992734,73.1963391362529,82.6477954411473,97.2020984369842,89.0064160668953,97.3589858749485,269.891980364745,222.127235479572,224.980410248314,257.903390031923,90.9075875934702,100.533462781847,121.918172824533,89.8990187210827,71.3553115690709,110.411757875383,107.497715946899,100.580347476133,79.7706061617035,128.184618000343,112.83830890802,89.1157794959275,89.9284381783307,86.7090265813681,92.6138291742011,89.2050903319581,81.330023527328,87.7064851564559,86.9183601768794,85.7291409170502,87.339199837009,95.0890086092632,82.3227116291133,127.834442280681,101.268000706135,75.7542251633803,75.7895284188086,73.2933241563318,99.4111214772414,89.4789585295564,68.9424701304238,173.35991835237,161.898959157565,311.478838418374,50.8554373826225,57.3406161280574,47.2325292879114,71.9390626574849,61.5940255151595,41.6882436658418,120.300128543397,118.95939128986,93.0979823624625,144.322543616166,132.091915811767,150.576250945013,93.2678884562746,116.378015439847,96.9762047364454,51.8432134065772,51.5790981744461,42.2952867122258,58.3431153914515,46.1812074714965,44.3408163567239,48.7957247758374,102.756405797701,90.0489608672377,108.948329980016,103.405656354177,97.6238951006132,112.324062880113,93.1617978297257,105.710160460152,211.422491518826,144.797441388603,150.227189524606,100.101692387217,91.5791312460121,94.8062334413303,138.753950503686,118.180148106653,140.574387954665,142.600235369255,118.026123382456,120.600441448969,151.528112859701,125.29764665705,71.5965287093144,86.90281157512,171.352776094353,136.544907484368,116.309978723133,104.838291580777,97.7493164116993,78.5683787084846,54.5550609666024,61.8344255393095,103.801600375414,84.6954750934498,73.8935195149272,92.4386714099331,149.378818297738,156.069677132661,171.372786860012,97.056297761201,106.941345946282,130.480640237981,142.604938601764,130.615690195909,131.912064430465,105.355125746283,104.536360643642,137.981917279984,124.833458705859,115.390286822089,67.2304019481904,117.928033611661,95.40353597489,103.278428917802,104.379386282148,125.895742714965,90.0620839297857,102.949193249062,162.349493705522,85.7860905320573,138.252407055494,144.098595107439,117.120154321568,100.649136042404,143.057415518244,131.949175982451,141.91923443418,141.79886392122,74.5464143384315,81.1133448377806,105.385390266842,129.000857658409,129.339720304927,118.399583783239,101.194916950606,90.422890701429,89.3319233856935,91.7294237239525,94.4513383562067,112.277262900733,153.699978961116,130.861407476131,113.664426209911,107.844300354367,91.1994977459961,86.7147894640195,87.8689722461919,128.974204898384,91.2877143507205,76.9470242272998,127.305247729225,123.032708886088,122.657129370113,107.136926569304,105.588152071004,96.2177093244805,103.513232747431,106.965614585188,118.576843418632,96.9152341647507,122.761648035456,115.409727247604,131.817884321561,132.749588582202,146.879027129713,120.383157628053,135.216436926734,124.823294816072,129.193744146665,144.918910531622,135.011462588803,124.943329460916,134.79536454291,124.035367643356,112.745668229349,102.912063726895,113.886974770683,114.301074578464,109.582151036918,111.415624343044,119.70794949114,113.251245490432,102.017159540856,91.8041269702633,94.4546146746347,112.991778971022,127.359741310581,107.731552430171,95.0367187121366,93.8417270132462,105.921199683131,107.60779787713,118.220042064555,104.394000677843,114.727166682727,134.477155207172,139.163768540148,111.306745630503,100.821480330086,85.3767145523556,80.4617691629287,80.554918486227,79.7705315733174,107.628073969728,117.889929352431,96.0123644984739,101.724281435347,125.02654458382,137.418418757785,108.067348785394,96.256412076801,129.991108474553,117.986642944027,110.334305753872,97.3964530397284,76.2153471360262,77.6022269288405,76.4923899602571,80.3939234941574,77.2911766874224,87.5406679929604,77.9989378046913,90.4869304977293,77.0979482239457,102.538073078705,126.730024329759,97.8610903307882,94.922240728828,142.087272139196,140.536812224052,138.361093897914,103.765551080997,141.032174079067,129.625663106484,115.46694118478,129.999026086188,122.762069419399,138.424423555739,129.134613834291,135.89897392876,126.887376720834,122.102100240287,132.855919754939,79.9514560465976,80.9548187987273,117.458727556445,49.1157011857862,120.419195532871,107.324862722487,88.2671773257603,69.6912467198624,81.1628790571968,86.5734782113541,71.6161447070686,72.7254651904831,75.53278514666,78.0097703454991,55.6931933540209,101.451002514629,112.538183769569,79.8143078939595,100.095395359754,83.8819305127954,91.8599410650663,85.730039733705,58.7617351791177,131.416156515678,101.679394014634,118.20322135746,75.3530175942564,75.0809584135961,125.028693376067,103.376449906716,117.196602417974,115.426411305421,131.466539125451,97.5672729355739,99.27208349031,104.820102491257,92.1121754752939,96.7795132264858,96.5443890931525,207.713641452491,194.812421634532,191.268763745323,105.013767981662,139.97867715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| |||
|short_description=p1@Hspa4 | |||
}} | |||
Revision as of 19:56, 12 September 2013
| Short description: | p1@Hspa4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Hspa4_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000020630, ENSMUST00000151854, NM_008300, uc007ivq.1, uc007ivr.1, uc007ivs.1_5end |
| EntrezGene: | Hspa4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| developing anatomical structure | 1.17e-07 | 304 |
| embryonic structure | 6.98e-07 | 294 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
