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FFCP PHASE1:Mm9::chr11:53583960..53584007,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16362|HGNC=|MCL_coexpression_id=12|UniProt=P15314,Q5SX14,Q5SX16,Q5SX13|association_with_transcript=0bp_to_ENSMUST00000019043,ENSMUST00000123376,ENSMUST00000138913,NM_001159396,uc007iwz.2_5end|description=CAGE_peak_2_at_Irf1_5end|id=chr11:53583960..53584007,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.10e-17!43;UBERON:0005409!3.35e-17!59;UBERON:0001007!6.34e-16!128;UBERON:0001555!6.34e-16!128;UBERON:0007026!6.34e-16!128;UBERON:0004119!8.10e-16!130;UBERON:0000925!8.10e-16!130;UBERON:0006595!8.10e-16!130;UBERON:0004921!5.53e-15!126;UBERON:0004185!5.53e-15!126;UBERON:0000344!2.62e-09!15;UBERON:0001242!2.31e-08!13;UBERON:0000060!2.31e-08!13;UBERON:0001262!2.31e-08!13;UBERON:0004786!2.31e-08!13;UBERON:0004923!1.91e-07!24;UBERON:0002365!2.34e-07!25;UBERON:0002330!2.34e-07!25;UBERON:0009854!3.59e-07!23;UBERON:0009856!3.59e-07!23;UBERON:0002107!9.04e-07!22;UBERON:0007499!9.04e-07!22;UBERON:0006925!9.04e-07!22;UBERON:0009497!9.04e-07!22;UBERON:0000015!9.04e-07!22;UBERON:0002423!9.04e-07!22;UBERON:0006235!9.04e-07!22;UBERON:0008835!9.04e-07!22;UBERON:0003894!9.04e-07!22;UBERON:0004161!9.04e-07!22;UBERON:0008836!9.04e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.15e-17,31;UBERON:0005409,2.82e-15,47;UBERON:0001007,1.87e-12,116;UBERON:0001555,1.87e-12,116;UBERON:0007026,1.87e-12,116;UBERON:0004119,3.12e-12,118;UBERON:0000925,3.12e-12,118;UBERON:0006595,3.12e-12,118;UBERON:0004921,1.45e-11,114;UBERON:0000344,3.35e-10,15;UBERON:0001242,3.79e-09,13;UBERON:0001262,3.79e-09,13;UBERON:0004786,3.79e-09,13;UBERON:0004923,1.72e-07,24;UBERON:0009854,4.02e-07,23;UBERON:0009856,4.02e-07,23;UBERON:0002365,5.88e-07,25;UBERON:0002330,5.88e-07,25|phase1_expression=0.960893082628764,4.88565570695105,5.0049916332849,13.9133537201142,12.0214975187123,2.51818907867835,5.13947809310157,0.774739940649458,0.140788722151667,0.234064526321993,0,0,1.02720437958723,1.04904482902797,0.666219523631325,0.607425802169478,0,1.41957974411207,1.64537320326887,2.12194825899015,0.595303031057488,1.39007331681239,0.783599367416806,4.15980299262857,4.81759490241057,2.8711598205751,3.01533397311352,1.939241094173,8.7410772949932,5.54466285471848,3.32595765982957,0,0,0,7.51014211353314,5.81821258754723,3.67504841272264,0.418531630736908,0.7813353445238,1.57057123192139,2.94115744015507,4.78131839470912,2.42755176515577,2.26614272356039,1.72340783073175,1.65192076945513,1.56478268869608,1.09012578190223,1.31811709640683,1.1665793944457,0.979904951377538,0,1.51004345451963,0.725362142011344,0,0,0.85960031981627,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,3.1496490104849,1.97773272513395,1.4209602298922,1.79760066311043,1.15265491596466,0.207379224616955,0,0,0.285650984403804,0.441737081903227,0,0,0,2.20231761998777,0.638436690425939,0.614426133024974,0.131886287730194,0.182975287204819,0,0.279182999001381,1.68828783009504,1.06958773443767,0.294628585473668,0.854230084794618,0,0.075726193333184,0.302286240427142,4.34796733052517,6.88339101585109,0.679971333707751,5.93673510801599,3.89865850468601,3.13618820968135,2.80888840263504,1.02258193546835,0.779358013808606,0.70667914902068,0.704217098883403,1.28326477414318,7.64415719119937,0,0.865964164044856,0.506719730950197,0.505524445014783,2.8545969929765,0.776813650941515,1.92974780784272,1.73485326766136,1.21786191324856,0.922461989024234,0.60289056221049,1.64624189989987,1.38233250462643,2.96633961281249,2.02439099687876,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,3.72783522436244,0.292780797011547,0,5.8755122697976,0.239630249011841,1.19980546198682,1.01656181658452,1.3481157546434,0,0.125654352112864,1.04294592115366,1.02286182932132,0.41557608911912,0.486723789203273,1.32391173005411,1.49288364732112,4.0435641349388,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.90422890701429,0.544291993210623,0.12811372028485,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,0.43839146485515,1.39023624612799,0.696504333044333,1.23469281844766,1.39323986772945,0,0.257347907114715,0.852490498186778,0.414251545071004,0.469052119962192,1.08037236876609,0.710234206755631,0.393528463494808,0.617068451549513,0.930135779001631,1.3413670069981,0.817357396570186,0.493679549740441,0.164167464079095,0.810688095458557,0.877199924551994,0.439100230582101,1.47627060636409,2.73376933133365,0.205809224758569,7.26921322564356,6.61126416658861,0.853153002140936,1.39342003116263,1.67527699718721,4.03367049246685,2.89091456998331,5.1360919050391,8.54152310780121,4.6115707322723,5.02670417600539,8.35617182572834,7.40863531052657,8.08937467788799,8.64552199498777,13.1433240347882,0.569003702859245,0.685491075658373,0,0.814605311381257,0.969762435838129,0.280543279561274,1.45444035385792,0.590440591918409,1.09899109488962,1.23397163921801,4.74324203339438,0.500535317148282,0.982794975566015,1.3491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|EntrezGene=16362
|HGNC=
|MCL_coexpression_id=12
|UniProt=P15314,Q5SX14,Q5SX16,Q5SX13
|association_with_transcript=0bp_to_ENSMUST00000019043,ENSMUST00000123376,ENSMUST00000138913,NM_001159396,uc007iwz.2_5end
|description=CAGE_peak_2_at_Irf1_5end
|id=chr11:53583960..53584007,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.10e-17!43;UBERON:0005409!3.35e-17!59;UBERON:0001007!6.34e-16!128;UBERON:0001555!6.34e-16!128;UBERON:0007026!6.34e-16!128;UBERON:0004119!8.10e-16!130;UBERON:0000925!8.10e-16!130;UBERON:0006595!8.10e-16!130;UBERON:0004921!5.53e-15!126;UBERON:0004185!5.53e-15!126;UBERON:0000344!2.62e-09!15;UBERON:0001242!2.31e-08!13;UBERON:0000060!2.31e-08!13;UBERON:0001262!2.31e-08!13;UBERON:0004786!2.31e-08!13;UBERON:0004923!1.91e-07!24;UBERON:0002365!2.34e-07!25;UBERON:0002330!2.34e-07!25;UBERON:0009854!3.59e-07!23;UBERON:0009856!3.59e-07!23;UBERON:0002107!9.04e-07!22;UBERON:0007499!9.04e-07!22;UBERON:0006925!9.04e-07!22;UBERON:0009497!9.04e-07!22;UBERON:0000015!9.04e-07!22;UBERON:0002423!9.04e-07!22;UBERON:0006235!9.04e-07!22;UBERON:0008835!9.04e-07!22;UBERON:0003894!9.04e-07!22;UBERON:0004161!9.04e-07!22;UBERON:0008836!9.04e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.15e-17,31;UBERON:0005409,2.82e-15,47;UBERON:0001007,1.87e-12,116;UBERON:0001555,1.87e-12,116;UBERON:0007026,1.87e-12,116;UBERON:0004119,3.12e-12,118;UBERON:0000925,3.12e-12,118;UBERON:0006595,3.12e-12,118;UBERON:0004921,1.45e-11,114;UBERON:0000344,3.35e-10,15;UBERON:0001242,3.79e-09,13;UBERON:0001262,3.79e-09,13;UBERON:0004786,3.79e-09,13;UBERON:0004923,1.72e-07,24;UBERON:0009854,4.02e-07,23;UBERON:0009856,4.02e-07,23;UBERON:0002365,5.88e-07,25;UBERON:0002330,5.88e-07,25
|phase1_expression=0.960893082628764,4.88565570695105,5.0049916332849,13.9133537201142,12.0214975187123,2.51818907867835,5.13947809310157,0.774739940649458,0.140788722151667,0.234064526321993,0,0,1.02720437958723,1.04904482902797,0.666219523631325,0.607425802169478,0,1.41957974411207,1.64537320326887,2.12194825899015,0.595303031057488,1.39007331681239,0.783599367416806,4.15980299262857,4.81759490241057,2.8711598205751,3.01533397311352,1.939241094173,8.7410772949932,5.54466285471848,3.32595765982957,0,0,0,7.51014211353314,5.81821258754723,3.67504841272264,0.418531630736908,0.7813353445238,1.57057123192139,2.94115744015507,4.78131839470912,2.42755176515577,2.26614272356039,1.72340783073175,1.65192076945513,1.56478268869608,1.09012578190223,1.31811709640683,1.1665793944457,0.979904951377538,0,1.51004345451963,0.725362142011344,0,0,0.85960031981627,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,3.1496490104849,1.97773272513395,1.4209602298922,1.79760066311043,1.15265491596466,0.207379224616955,0,0,0.285650984403804,0.441737081903227,0,0,0,2.20231761998777,0.638436690425939,0.614426133024974,0.131886287730194,0.182975287204819,0,0.279182999001381,1.68828783009504,1.06958773443767,0.294628585473668,0.854230084794618,0,0.075726193333184,0.302286240427142,4.34796733052517,6.88339101585109,0.679971333707751,5.93673510801599,3.89865850468601,3.13618820968135,2.80888840263504,1.02258193546835,0.779358013808606,0.70667914902068,0.704217098883403,1.28326477414318,7.64415719119937,0,0.865964164044856,0.506719730950197,0.505524445014783,2.8545969929765,0.776813650941515,1.92974780784272,1.73485326766136,1.21786191324856,0.922461989024234,0.60289056221049,1.64624189989987,1.38233250462643,2.96633961281249,2.02439099687876,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,3.72783522436244,0.292780797011547,0,5.8755122697976,0.239630249011841,1.19980546198682,1.01656181658452,1.3481157546434,0,0.125654352112864,1.04294592115366,1.02286182932132,0.41557608911912,0.486723789203273,1.32391173005411,1.49288364732112,4.0435641349388,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.90422890701429,0.544291993210623,0.12811372028485,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,0.43839146485515,1.39023624612799,0.696504333044333,1.23469281844766,1.39323986772945,0,0.257347907114715,0.852490498186778,0.414251545071004,0.469052119962192,1.08037236876609,0.710234206755631,0.393528463494808,0.617068451549513,0.930135779001631,1.3413670069981,0.817357396570186,0.493679549740441,0.164167464079095,0.810688095458557,0.877199924551994,0.439100230582101,1.47627060636409,2.73376933133365,0.205809224758569,7.26921322564356,6.61126416658861,0.853153002140936,1.39342003116263,1.67527699718721,4.03367049246685,2.89091456998331,5.1360919050391,8.54152310780121,4.6115707322723,5.02670417600539,8.35617182572834,7.40863531052657,8.08937467788799,8.64552199498777,13.1433240347882,0.569003702859245,0.685491075658373,0,0.814605311381257,0.969762435838129,0.280543279561274,1.45444035385792,0.590440591918409,1.09899109488962,1.23397163921801,4.74324203339438,0.500535317148282,0.982794975566015,1.34917267430912,1.82574109249653,2.894125917029,2.80088436959562,2.87696137450811,0.648540907100142,4.3929826110093,5.75072826109418,6.32639611036456,7.17686648163489,8.5876818502018,5.9201146462231,5.78932225636041,1.47802552133284,0.189491411770485,0.488894929326078,0.339490171550376,1.17345124144251,1.50755631697634,2.14239276797412,0.585400943573396,0.945810864637146,0.8858587585951,0.956728611944923,2.13022309130459,1.72684981865896,2.16973587872267,4.52373851817817,2.71952841909355,0.983528546038072,2.75936746304733,0.481651769963376,0.35163505977661,0.983609672260053,0.504941854408746,0.94652465824877,1.56175497718655,0.646270193198397,0.477937595905104,0.445597348164788,0,0.404810701674894,0.292255857911312,1.18586333383957,0.642642632843614,2.55492153374884,1.95872164033981,1.14020871547503,2.3095817216155,0,1.45668381692989,1.51161778482376,1.50884063804718,2.95301892880773,2.76691633149535,2.84271122485043,3.27180356529755,1.78248689192361,3.79244109522979,2.10837217149998,4.12542172992747,6.80879211507576,1.08036656418786,1.55230420539305,1.92903331528433,2.48276327099183,1.07021290561242,1.31639216481697,2.13125464380219,0.704015124191131,1.48282449604674,3.30792597082443,1.15420377059036,0.322928853391811,0.663442174209714,0.477489376012546,0.984845398470368,5.82961673259701,0,1.53783792718067,0.619160603889667,1.29636169158798,1.50694765603753,1.0935538217682,0.915112692826091,1.01987057996313,1.11961161858926,0.690999869022119,3.81868247206045,0.632671987162271,0.813277868507395,1.08005340821801,2.29997125615916,1.31017538247707,1.34864346384821,2.47960367176008,2.87931536182433,10.4988128366352,7.45607175704311,0,0.897099276263873,0.165458490457098,0.777804753376191,0.774958940866387,1.35164900392623,1.17357238645754,1.8228613878153,0.943734099831398,0,0,1.26404448251271,1.82452693761148,1.23253148597793,0.129920822977795,0.895133478337407,0.39736270956253,0.600977247599844,1.18151621739662,0.605798699688886,0.457240839929999,0.907435666231565,0.584747284438515,0.577271049841977,0.935015217452552,0.906921534460845,0.221985953374065,0,0.167884616364078,1.15913756419314,2.62755465631655,1.64836461840539,1.71494703263253,2.00628841614145,0.564751842617067,0,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,2.71885445390523,2.07104124700728,0.103787347584177,0.399024873401031,0.170733605754134,0,0.838452650511929,1.83843508450014,2.00022055021454,1.03017528619447,1.60459604795908,0.252697211763798,1.2673964994512,1.13175804831646,0.842773567228942,1.21647789569252,0.976402972245426,1.42888107384922,1.27472758539341,1.15745532278223,1.23625770240992,1.17759136107518,1.71434626192708,0.70990322463735,0.238436189947321,1.16277133305863,1.41164070622996,1.35383372626682,1.28049581010941,0.789209134313529,1.08643291076689,0,1.42362021749009,1.28055827088233,1.22769312950907,1.23949472948773,0.771626443924566,0.499621155875892,1.63752125911786,1.71896843238639,0.57386499620653,2.20591419119516,1.15933917810211
|short_description=p2@Irf1
}}

Revision as of 19:57, 12 September 2013

Short description:p2@Irf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Irf1_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000019043, ENSMUST00000123376, ENSMUST00000138913, NM_001159396, uc007iwz.2_5end
EntrezGene:Irf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Irf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F28.36
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G113.14
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I110.50
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine2.15e-1731
gastrointestinal system2.82e-1547
digestive system1.87e-12116
digestive tract1.87e-12116
primitive gut1.87e-12116
endoderm-derived structure3.12e-12118
endoderm3.12e-12118
presumptive endoderm3.12e-12118
subdivision of digestive tract1.45e-11114
mucosa3.35e-1015
intestinal mucosa3.79e-0913
wall of intestine3.79e-0913
gastrointestinal system mucosa3.79e-0913
organ component layer1.72e-0724
digestive tract diverticulum4.02e-0723
sac4.02e-0723
exocrine gland5.88e-0725
exocrine system5.88e-0725







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