FFCP PHASE1:Mm9::chr11:54723408..54723426,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=206|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:54723408..54723426,+|id=chr11:54723408..54723426,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.90e-10!18;UBERON:0000948!2.90e-10!18;UBERON:0005498!2.90e-10!18;UBERON:0004140!2.90e-10!18;UBERON:0009881!2.90e-10!18;UBERON:0004141!2.90e-10!18;UBERON:0003084!2.90e-10!18;UBERON:0007005!2.90e-10!18;UBERON:0004139!2.90e-10!18;UBERON:0004291!2.90e-10!18;UBERON:0003103!1.01e-08!43;UBERON:0004872!5.28e-08!33;UBERON:0004535!2.78e-07!23;UBERON:0001009!2.78e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.19e-15,18;UBERON:0000948,9.19e-15,18;UBERON:0005498,9.19e-15,18;UBERON:0004140,9.19e-15,18;UBERON:0009881,9.19e-15,18;UBERON:0004141,9.19e-15,18;UBERON:0003084,9.19e-15,18;UBERON:0007005,9.19e-15,18;UBERON:0004139,9.19e-15,18;UBERON:0004291,9.19e-15,18;UBERON:0003103,4.00e-13,43;UBERON:0004535,2.67e-12,23;UBERON:0001009,2.67e-12,23;UBERON:0004872,6.85e-11,33;UBERON:0001008,5.51e-10,19;UBERON:0006554,3.77e-09,18;UBERON:0003975,4.83e-07,5;UBERON:0002113,5.79e-07,14;UBERON:0003918,5.79e-07,14;UBERON:0011143,5.79e-07,14;UBERON:0005095,5.79e-07,14;UBERON:0007687,5.79e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5189177711204,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.436050312760893,0.219686182734472,2.52758868796568,0.839918529752175,0,0,0,0,17.4936416504444,32.6648121530183,39.1910790130856,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0.599200221036809,1.15265491596466,0,0.135005938331691,0,0.571301968807607,0,0.122490799214954,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.763991238884051,0.294628585473668,0.427115042397309,0,0.075726193333184,0,0,0,0,0,0,0,5.61777680527007,0.511290967734173,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0.505524445014783,9.47726201668198,0.517875767294343,1.03909497345377,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,1.38233250462643,30.404981031328,9.25435884287435,0.884610551949874,0.808834249737046,2.87093973998512,3.39412677194655,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.916554274652847,1.8661045591514,13.1415834385511,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0.640568601424249,0.0937017245597288,0,0,0,0,0,1.11218899690239,0.696504333044333,0,0.398068533636986,0,0,0,2.89976081549703,3.75241695969754,3.06105504483725,2.13070262026689,2.16440654922144,4.9365476123961,2.79040733700489,2.14618721119695,2.91913355917924,2.30383789878873,1.97000956894914,0.891756905004413,0.877199924551994,1.97595103761946,1.34206418760372,0,0,0,0.793351699990633,0.426576501070468,0.464473343720877,0.128867461322093,1.00841762311671,4.44756087689741,8.3699275489526,0.949058123089023,26.0224348463937,31.4169011000337,18.7019083718682,21.4460495831032,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,2.24016460629846,4.26695471768777,8.41629838683823,20.8680572510049,57.5679577120448,71.2774224399842,78.2338019264215,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0.358794827043824,0,4.43407656399851,0.757965647081939,0,0.339490171550376,0.234690248288502,0.502518772325447,2.38043640886014,5.46374214001837,0.472905432318573,0.8858587585951,0.478364305972461,4.7520361267564,5.52591941970866,6.07526046042349,3.01582567878545,0.54390568381871,1.47529281905711,1.10374698521893,0.321101179975584,0.117211686592203,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,2.12910127812403,0.178065603667255,0,0.494910368917606,0,0,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,1.55056975900933,0,0,0.316036757935816,1.05418608574999,0,2.38307724027652,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.822745103010605,1.8267896946876,41.0675489111493,12.2862601101016,1.7642271844397,0.65954501176592,0.161464426695906,0,0,0,4.95517422270746,0,0.512612642393558,0,0.555583582109135,0,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0.632671987162271,0.609958401380546,0.108005340821801,0.418176592028937,0.655087691238533,1.21377911746339,0.330613822901344,0.26175594198403,0.129614973291793,0,1.12738587736838,0.448549638131936,0.330916980914195,0.777804753376191,0.387479470433193,0.506868376472335,0.704143431874524,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0,0,0.100826185136841,0.38983152295901,0.481059208201647,0.233753804363138,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,42.9792868783207,1.28206136987086,2.35805216986972,0,0,0,1.14579102687879,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=206 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:54723408..54723426,+ | |||
|id=chr11:54723408..54723426,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.90e-10!18;UBERON:0000948!2.90e-10!18;UBERON:0005498!2.90e-10!18;UBERON:0004140!2.90e-10!18;UBERON:0009881!2.90e-10!18;UBERON:0004141!2.90e-10!18;UBERON:0003084!2.90e-10!18;UBERON:0007005!2.90e-10!18;UBERON:0004139!2.90e-10!18;UBERON:0004291!2.90e-10!18;UBERON:0003103!1.01e-08!43;UBERON:0004872!5.28e-08!33;UBERON:0004535!2.78e-07!23;UBERON:0001009!2.78e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.19e-15,18;UBERON:0000948,9.19e-15,18;UBERON:0005498,9.19e-15,18;UBERON:0004140,9.19e-15,18;UBERON:0009881,9.19e-15,18;UBERON:0004141,9.19e-15,18;UBERON:0003084,9.19e-15,18;UBERON:0007005,9.19e-15,18;UBERON:0004139,9.19e-15,18;UBERON:0004291,9.19e-15,18;UBERON:0003103,4.00e-13,43;UBERON:0004535,2.67e-12,23;UBERON:0001009,2.67e-12,23;UBERON:0004872,6.85e-11,33;UBERON:0001008,5.51e-10,19;UBERON:0006554,3.77e-09,18;UBERON:0003975,4.83e-07,5;UBERON:0002113,5.79e-07,14;UBERON:0003918,5.79e-07,14;UBERON:0011143,5.79e-07,14;UBERON:0005095,5.79e-07,14;UBERON:0007687,5.79e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5189177711204,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.436050312760893,0.219686182734472,2.52758868796568,0.839918529752175,0,0,0,0,17.4936416504444,32.6648121530183,39.1910790130856,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0.599200221036809,1.15265491596466,0,0.135005938331691,0,0.571301968807607,0,0.122490799214954,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0.0914876436024097,0,0.837548997004143,1.68828783009504,0.763991238884051,0.294628585473668,0.427115042397309,0,0.075726193333184,0,0,0,0,0,0,0,5.61777680527007,0.511290967734173,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0.505524445014783,9.47726201668198,0.517875767294343,1.03909497345377,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.470354828542819,1.38233250462643,30.404981031328,9.25435884287435,0.884610551949874,0.808834249737046,2.87093973998512,3.39412677194655,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.916554274652847,1.8661045591514,13.1415834385511,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0.640568601424249,0.0937017245597288,0,0,0,0,0,1.11218899690239,0.696504333044333,0,0.398068533636986,0,0,0,2.89976081549703,3.75241695969754,3.06105504483725,2.13070262026689,2.16440654922144,4.9365476123961,2.79040733700489,2.14618721119695,2.91913355917924,2.30383789878873,1.97000956894914,0.891756905004413,0.877199924551994,1.97595103761946,1.34206418760372,0,0,0,0.793351699990633,0.426576501070468,0.464473343720877,0.128867461322093,1.00841762311671,4.44756087689741,8.3699275489526,0.949058123089023,26.0224348463937,31.4169011000337,18.7019083718682,21.4460495831032,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,2.24016460629846,4.26695471768777,8.41629838683823,20.8680572510049,57.5679577120448,71.2774224399842,78.2338019264215,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0.358794827043824,0,4.43407656399851,0.757965647081939,0,0.339490171550376,0.234690248288502,0.502518772325447,2.38043640886014,5.46374214001837,0.472905432318573,0.8858587585951,0.478364305972461,4.7520361267564,5.52591941970866,6.07526046042349,3.01582567878545,0.54390568381871,1.47529281905711,1.10374698521893,0.321101179975584,0.117211686592203,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,2.12910127812403,0.178065603667255,0,0.494910368917606,0,0,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,1.55056975900933,0,0,0.316036757935816,1.05418608574999,0,2.38307724027652,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.822745103010605,1.8267896946876,41.0675489111493,12.2862601101016,1.7642271844397,0.65954501176592,0.161464426695906,0,0,0,4.95517422270746,0,0.512612642393558,0,0.555583582109135,0,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0.632671987162271,0.609958401380546,0.108005340821801,0.418176592028937,0.655087691238533,1.21377911746339,0.330613822901344,0.26175594198403,0.129614973291793,0,1.12738587736838,0.448549638131936,0.330916980914195,0.777804753376191,0.387479470433193,0.506868376472335,0.704143431874524,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0,0,0.100826185136841,0.38983152295901,0.481059208201647,0.233753804363138,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,42.9792868783207,1.28206136987086,2.35805216986972,0,0,0,1.14579102687879,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0,0,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.579421629724277,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0,0,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,0.409231043169689,0.77468420592983,0.192906610981141,0,0.467863216890817,1.71896843238639,1.53030665655075,0.882365676478062,0.231867835620421 | |||
|short_description=p@chr11:54723408..54723426,+ | |||
}} |
Revision as of 20:01, 12 September 2013
Short description: | p@chr11:54723408..54723426, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54723408..54723426, + |
Coexpression cluster: | MCL_coexpression_mm9:206 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.19e-15 | 18 |
heart | 9.19e-15 | 18 |
primitive heart tube | 9.19e-15 | 18 |
primary heart field | 9.19e-15 | 18 |
anterior lateral plate mesoderm | 9.19e-15 | 18 |
heart tube | 9.19e-15 | 18 |
heart primordium | 9.19e-15 | 18 |
cardiac mesoderm | 9.19e-15 | 18 |
cardiogenic plate | 9.19e-15 | 18 |
heart rudiment | 9.19e-15 | 18 |
compound organ | 4.00e-13 | 43 |
cardiovascular system | 2.67e-12 | 23 |
circulatory system | 2.67e-12 | 23 |
splanchnic layer of lateral plate mesoderm | 6.85e-11 | 33 |
renal system | 5.51e-10 | 19 |
urinary system structure | 3.77e-09 | 18 |
internal female genitalia | 4.83e-07 | 5 |
kidney | 5.79e-07 | 14 |
kidney mesenchyme | 5.79e-07 | 14 |
upper urinary tract | 5.79e-07 | 14 |
kidney rudiment | 5.79e-07 | 14 |
kidney field | 5.79e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.