FFCP PHASE1:Mm9::chr11:5688361..5688437,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:5688361..5688437,-|id=chr11:5688361..5688437,-|ontology_enrichment_celltype=CL:0000988!2.07e-10!32;CL:0002032!2.07e-10!32;CL:0000037!2.07e-10!32;CL:0000566!2.07e-10!32;CL:0000837!2.07e-10!32;CL:0000034!6.16e-10!97;CL:0000723!3.00e-09!91;CL:0000048!3.00e-09!91;CL:0002320!4.52e-08!46;CL:0000134!4.52e-08!46;CL:0002031!2.80e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,5.91e-11,32;CL:0002032,5.91e-11,32;CL:0000037,5.91e-11,32;CL:0000837,5.91e-11,32;CL:0000034,8.87e-11,97;CL:0000723,5.79e-10,91;CL:0000048,5.79e-10,91;CL:0002320,3.69e-09,46;CL:0000134,3.69e-09,46;CL:0002031,1.06e-07,25;CL:0000219,1.69e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.52e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.69e-09,46;UBERON:0002193,9.15e-07,48;UBERON:0002405,9.15e-07,48|phase1_expression=2.08193501236232,1.74487703819681,0,2.41971369045464,4.00716583957078,0.839396359559449,1.16806320297763,4.00282302668886,1.97104211012333,1.40438715793196,4.45166717386313,2.39316476986009,4.28001824828014,3.14713448708391,1.66554880907831,1.82227740650843,4.19737126876888,1.73504190947031,2.05671650408608,4.2438965179803,1.53077922271926,2.28369187762036,2.35079810225042,1.59992422793407,2.75291137280604,0.57423196411502,0.430761996159075,0.646413698057667,2.28028103347649,1.51218077855958,0.886922042621219,6.98533740805594,4.30545351309199,0,3.46621943701529,2.1610503896604,3.26670970019791,51.4793905806397,36.7227611926186,74.3403716442794,212.939798667227,57.3758207365094,63.11634589405,1.6366586336825,2.53442328048786,2.9367480345869,2.34717403304412,1.30815093828268,1.09843091367236,0.388859798148567,0.55994568650145,2.87505128729943,5.5368259999053,2.90144856804538,2.68875039313971,0,1.71920063963254,0.515672092277442,1.82084814773638,2.64495489636016,3.1691570175309,1.35537812827653,0,3.1496490104849,1.97773272513395,4.9733608046227,1.19840044207362,2.68952813725088,0.829516898467821,1.35005938331691,1.05162480675691,0.856952953211411,1.98781686856452,1.5923803897944,0.670918297127655,1.83843757322004,1.10115880999389,1.65993539510744,1.53606533256243,0.923204014111357,1.00636407962651,0.52091337055676,1.95428099300967,1.12552522006336,1.5279824777681,1.76777151284201,0.996601765593721,1.86399445825301,1.13589289999776,0.377857800533928,4.92769630792852,0,1.3599426674155,1.61910957491345,0,0.448026887097336,1.40444420131752,0.681721290312231,1.81850203222008,2.47337702157238,0.422530259330042,2.56652954828636,0,0,1.08245520505607,2.02687892380079,1.01104889002957,0.45673551887624,1.55362730188303,1.03909497345377,1.73485326766136,1.82679286987285,1.61430848079241,2.41156224884196,0.823120949949934,1.25666591329675,0.741584903203122,0.722996784599558,2.65383165584962,0.161766849947409,1.54589062922275,0.484875253135222,0,1.46390398505774,2.30391377494801,1.27728527604296,5.15205035375457,4.19931911695385,5.20987930999565,0.599162557619291,0.915001205637253,0.879580464790051,1.56441888173049,2.04572365864264,1.0389402227978,1.62241263067758,1.42575109390443,1.8661045591514,4.54900965180614,1.89397670297827,1.30120442962704,1.60931473103431,1.80062129805349,3.0140963567143,1.29269348387523,2.0498195245576,2.15513966487376,1.03481348295606,1.94011193639558,0.189106080167819,1.40760899331159,1.31517439456545,0.834141747676794,1.74126083261083,1.85203922767149,0.995171334092466,3.51106593656617,3.08817488537658,4.54661599032948,0.414251545071004,0.703578179943289,1.2604344302271,0.23674473558521,0.196764231747404,0.925602677324269,1.16266972375204,0.536546802799238,0.700592054203017,0.658239399653922,0.656669856316381,0.486412857275134,2.04679982395465,1.97595103761946,0.536825675041487,0.841159794256509,1.3377599609307,0.660837565967596,1.32225283331772,1.70630600428187,3.0190767341857,0.902072229254653,0.605050573870028,1.11189021922435,0.951128130562796,1.42358718463353,1.31759163779209,2.01068167040216,0.994782360205754,2.33956904542944,0,0.648414149624083,1.1948476395262,1.70701110857774,1.14248512609729,0,1.22190796707189,1.55161989734101,1.33258057791605,1.7706230394792,2.06654207171443,2.04098346193787,1.35736880313981,0.296452627087149,1.66845105716094,0.982794975566015,2.47348323623339,1.42002084971952,1.92941727801933,1.52775511068852,1.72617682470486,1.62135226775035,1.09824565275233,1.43768206527355,0.744281895337007,0.624075346229121,1.01031551178845,1.97337154874103,0.482443521363367,1.29327233116623,1.89491411770485,0.977789858652155,1.52770577197669,1.64283173801951,3.1826188913945,1.19021820443007,1.17080188714679,0.788175720530955,1.10732344824387,0.478364305972461,1.3109065177259,1.72684981865896,1.01254341007058,1.50791283939272,2.17562273527484,0.491764273019036,1.37968373152366,0.963303539926752,0.820481806145422,0.327869890753351,1.00988370881749,0.631016438832513,1.95219372148319,1.07711698866399,1.91175038362042,1.78238939265915,2.54768877709949,0.809621403349789,3.50707029493574,1.97643888973262,1.28528526568723,0.851640511249612,1.24645922567079,0.977321756121456,1.48473110675282,1.32745138339963,0.971122544619926,1.81394134178851,1.32023555829129,0.885905678642318,0.922305443831782,0.516856586336442,2.54473610634254,1.78248689192361,1.8962205476149,0,1.03135543248187,5.44703369206061,1.44048875225048,3.75140182969988,1.71469628025274,1.06404140185364,1.96205699362278,3.29098041204242,2.74018454203139,0.23467170806371,2.54198485036584,1.10264199027481,2.30840754118072,1.13025098687134,0.844380948994182,0.716234064018819,0.492422699235184,1.45740418314925,0.556275906031529,1.87957968877638,1.23832120777933,1.29636169158798,2.26042148405629,2.05041341581538,2.28778173206523,4.75939603982795,6.85762116385924,6.35719879500349,0.954670618015114,1.10717597753397,0.813277868507395,0.540026704109006,1.88179466413022,1.31017538247707,1.48350781023303,1.1571483801547,1.30877970992015,1.68499465279331,0.621339313086926,8.45539408026285,1.04661582230785,1.15820943319968,0.777804753376191,1.42075805825504,0.844780627453891,1.5256441023948,1.8228613878153,1.99232754408851,2.89900944991207,4.89651010638371,1.58005560314089,2.43270258348197,1.84879722896689,0.909445760844565,1.07416017400489,0.79472541912506,1.56254084375959,2.65841148914239,2.3222283488074,1.143102099825,1.81487133246313,0.877120926657772,1.73181314952593,2.33753804363138,0.453460767230423,0.443971906748129,1.70456327558004,1.00730769818447,1.15913756419314,0.93841237725591,1.46521299413812,0.857473516316263,1.50471631210609,0,0.920650473014354,2.29158205375759,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,2.2516060161211,1.35942722695261,1.55328093525546,0.726511433089237,0.798049746802062,1.36586884603307,1.45864030240976,1.04806581313991,1.10306105070008,1.33348036680969,0.412070114477788,1.28367683836726,1.26348605881899,1.77435509923168,0.943131706930381,1.12369808963859,0.640251524048693,0.516919220600519,1.42888107384922,0.927074607558844,0.964546102318525,0.412085900803307,1.32479028120958,0.685738504770831,0.70990322463735,1.66905332963125,1.0174249164263,0.941093804153306,1.94613598150856,0.365855945745545,1.05227884575137,0.950628796921032,1.68342681497322,0.474540072496697,0.886540341380071,0.409231043169689,1.39443157067369,0.771626443924566,1.99848462350357,1.16965804222704,1.50409737833809,0.57386499620653,0.661774257358546,0.695603506861264|short_description=p@chr11:5688361..5688437,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:5688361..5688437,- | |||
|id=chr11:5688361..5688437,- | |||
|ontology_enrichment_celltype=CL:0000988!2.07e-10!32;CL:0002032!2.07e-10!32;CL:0000037!2.07e-10!32;CL:0000566!2.07e-10!32;CL:0000837!2.07e-10!32;CL:0000034!6.16e-10!97;CL:0000723!3.00e-09!91;CL:0000048!3.00e-09!91;CL:0002320!4.52e-08!46;CL:0000134!4.52e-08!46;CL:0002031!2.80e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.91e-11,32;CL:0002032,5.91e-11,32;CL:0000037,5.91e-11,32;CL:0000837,5.91e-11,32;CL:0000034,8.87e-11,97;CL:0000723,5.79e-10,91;CL:0000048,5.79e-10,91;CL:0002320,3.69e-09,46;CL:0000134,3.69e-09,46;CL:0002031,1.06e-07,25;CL:0000219,1.69e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.52e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.69e-09,46;UBERON:0002193,9.15e-07,48;UBERON:0002405,9.15e-07,48 | |||
|phase1_expression=2.08193501236232,1.74487703819681,0,2.41971369045464,4.00716583957078,0.839396359559449,1.16806320297763,4.00282302668886,1.97104211012333,1.40438715793196,4.45166717386313,2.39316476986009,4.28001824828014,3.14713448708391,1.66554880907831,1.82227740650843,4.19737126876888,1.73504190947031,2.05671650408608,4.2438965179803,1.53077922271926,2.28369187762036,2.35079810225042,1.59992422793407,2.75291137280604,0.57423196411502,0.430761996159075,0.646413698057667,2.28028103347649,1.51218077855958,0.886922042621219,6.98533740805594,4.30545351309199,0,3.46621943701529,2.1610503896604,3.26670970019791,51.4793905806397,36.7227611926186,74.3403716442794,212.939798667227,57.3758207365094,63.11634589405,1.6366586336825,2.53442328048786,2.9367480345869,2.34717403304412,1.30815093828268,1.09843091367236,0.388859798148567,0.55994568650145,2.87505128729943,5.5368259999053,2.90144856804538,2.68875039313971,0,1.71920063963254,0.515672092277442,1.82084814773638,2.64495489636016,3.1691570175309,1.35537812827653,0,3.1496490104849,1.97773272513395,4.9733608046227,1.19840044207362,2.68952813725088,0.829516898467821,1.35005938331691,1.05162480675691,0.856952953211411,1.98781686856452,1.5923803897944,0.670918297127655,1.83843757322004,1.10115880999389,1.65993539510744,1.53606533256243,0.923204014111357,1.00636407962651,0.52091337055676,1.95428099300967,1.12552522006336,1.5279824777681,1.76777151284201,0.996601765593721,1.86399445825301,1.13589289999776,0.377857800533928,4.92769630792852,0,1.3599426674155,1.61910957491345,0,0.448026887097336,1.40444420131752,0.681721290312231,1.81850203222008,2.47337702157238,0.422530259330042,2.56652954828636,0,0,1.08245520505607,2.02687892380079,1.01104889002957,0.45673551887624,1.55362730188303,1.03909497345377,1.73485326766136,1.82679286987285,1.61430848079241,2.41156224884196,0.823120949949934,1.25666591329675,0.741584903203122,0.722996784599558,2.65383165584962,0.161766849947409,1.54589062922275,0.484875253135222,0,1.46390398505774,2.30391377494801,1.27728527604296,5.15205035375457,4.19931911695385,5.20987930999565,0.599162557619291,0.915001205637253,0.879580464790051,1.56441888173049,2.04572365864264,1.0389402227978,1.62241263067758,1.42575109390443,1.8661045591514,4.54900965180614,1.89397670297827,1.30120442962704,1.60931473103431,1.80062129805349,3.0140963567143,1.29269348387523,2.0498195245576,2.15513966487376,1.03481348295606,1.94011193639558,0.189106080167819,1.40760899331159,1.31517439456545,0.834141747676794,1.74126083261083,1.85203922767149,0.995171334092466,3.51106593656617,3.08817488537658,4.54661599032948,0.414251545071004,0.703578179943289,1.2604344302271,0.23674473558521,0.196764231747404,0.925602677324269,1.16266972375204,0.536546802799238,0.700592054203017,0.658239399653922,0.656669856316381,0.486412857275134,2.04679982395465,1.97595103761946,0.536825675041487,0.841159794256509,1.3377599609307,0.660837565967596,1.32225283331772,1.70630600428187,3.0190767341857,0.902072229254653,0.605050573870028,1.11189021922435,0.951128130562796,1.42358718463353,1.31759163779209,2.01068167040216,0.994782360205754,2.33956904542944,0,0.648414149624083,1.1948476395262,1.70701110857774,1.14248512609729,0,1.22190796707189,1.55161989734101,1.33258057791605,1.7706230394792,2.06654207171443,2.04098346193787,1.35736880313981,0.296452627087149,1.66845105716094,0.982794975566015,2.47348323623339,1.42002084971952,1.92941727801933,1.52775511068852,1.72617682470486,1.62135226775035,1.09824565275233,1.43768206527355,0.744281895337007,0.624075346229121,1.01031551178845,1.97337154874103,0.482443521363367,1.29327233116623,1.89491411770485,0.977789858652155,1.52770577197669,1.64283173801951,3.1826188913945,1.19021820443007,1.17080188714679,0.788175720530955,1.10732344824387,0.478364305972461,1.3109065177259,1.72684981865896,1.01254341007058,1.50791283939272,2.17562273527484,0.491764273019036,1.37968373152366,0.963303539926752,0.820481806145422,0.327869890753351,1.00988370881749,0.631016438832513,1.95219372148319,1.07711698866399,1.91175038362042,1.78238939265915,2.54768877709949,0.809621403349789,3.50707029493574,1.97643888973262,1.28528526568723,0.851640511249612,1.24645922567079,0.977321756121456,1.48473110675282,1.32745138339963,0.971122544619926,1.81394134178851,1.32023555829129,0.885905678642318,0.922305443831782,0.516856586336442,2.54473610634254,1.78248689192361,1.8962205476149,0,1.03135543248187,5.44703369206061,1.44048875225048,3.75140182969988,1.71469628025274,1.06404140185364,1.96205699362278,3.29098041204242,2.74018454203139,0.23467170806371,2.54198485036584,1.10264199027481,2.30840754118072,1.13025098687134,0.844380948994182,0.716234064018819,0.492422699235184,1.45740418314925,0.556275906031529,1.87957968877638,1.23832120777933,1.29636169158798,2.26042148405629,2.05041341581538,2.28778173206523,4.75939603982795,6.85762116385924,6.35719879500349,0.954670618015114,1.10717597753397,0.813277868507395,0.540026704109006,1.88179466413022,1.31017538247707,1.48350781023303,1.1571483801547,1.30877970992015,1.68499465279331,0.621339313086926,8.45539408026285,1.04661582230785,1.15820943319968,0.777804753376191,1.42075805825504,0.844780627453891,1.5256441023948,1.8228613878153,1.99232754408851,2.89900944991207,4.89651010638371,1.58005560314089,2.43270258348197,1.84879722896689,0.909445760844565,1.07416017400489,0.79472541912506,1.56254084375959,2.65841148914239,2.3222283488074,1.143102099825,1.81487133246313,0.877120926657772,1.73181314952593,2.33753804363138,0.453460767230423,0.443971906748129,1.70456327558004,1.00730769818447,1.15913756419314,0.93841237725591,1.46521299413812,0.857473516316263,1.50471631210609,0,0.920650473014354,2.29158205375759,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,2.2516060161211,1.35942722695261,1.55328093525546,0.726511433089237,0.798049746802062,1.36586884603307,1.45864030240976,1.04806581313991,1.10306105070008,1.33348036680969,0.412070114477788,1.28367683836726,1.26348605881899,1.77435509923168,0.943131706930381,1.12369808963859,0.640251524048693,0.516919220600519,1.42888107384922,0.927074607558844,0.964546102318525,0.412085900803307,1.32479028120958,0.685738504770831,0.70990322463735,1.66905332963125,1.0174249164263,0.941093804153306,1.94613598150856,0.365855945745545,1.05227884575137,0.950628796921032,1.68342681497322,0.474540072496697,0.886540341380071,0.409231043169689,1.39443157067369,0.771626443924566,1.99848462350357,1.16965804222704,1.50409737833809,0.57386499620653,0.661774257358546,0.695603506861264 | |||
|short_description=p@chr11:5688361..5688437,- | |||
}} |
Revision as of 20:04, 12 September 2013
Short description: | p@chr11:5688361..5688437, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5688361..5688437, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.91e-11 | 32 |
hematopoietic oligopotent progenitor cell | 5.91e-11 | 32 |
hematopoietic stem cell | 5.91e-11 | 32 |
hematopoietic multipotent progenitor cell | 5.91e-11 | 32 |
stem cell | 8.87e-11 | 97 |
somatic stem cell | 5.79e-10 | 91 |
multi fate stem cell | 5.79e-10 | 91 |
connective tissue cell | 3.69e-09 | 46 |
mesenchymal cell | 3.69e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 1.06e-07 | 25 |
motile cell | 1.69e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.69e-09 | 46 |
hemolymphoid system | 9.15e-07 | 48 |
immune system | 9.15e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.