FFCP PHASE1:Mm9::chr11:6174833..6174889,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103694|HGNC=|MCL_coexpression_id=12|UniProt=Q8R1V4,Q5SVW9|association_with_transcript=0bp_to_ENSMUST00000004508,ENSMUST00000130621,ENSMUST00000132147,NM_134020,uc007hye.1_5end|description=CAGE_peak_1_at_Tmed4_5end|id=chr11:6174833..6174889,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.48e-16!43;UBERON:0000480!1.50e-12!308;UBERON:0000467!1.50e-12!308;UBERON:0000923!6.82e-11!314;UBERON:0005291!6.82e-11!314;UBERON:0006598!6.82e-11!314;UBERON:0002532!6.82e-11!314;UBERON:0005409!2.83e-10!59;UBERON:0002050!1.01e-09!317;UBERON:0005423!1.01e-09!317;UBERON:0007023!4.84e-09!51;UBERON:0000481!6.26e-08!230;UBERON:0002108!9.45e-08!16;UBERON:0000344!7.94e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.95e-11,31;UBERON:0007023,4.84e-09,51;UBERON:0000344,7.94e-07,15|phase1_expression=108.58091833705,201.358810207911,221.129630343315,146.695142483813,142.755283034709,96.5305813493366,113.30213068883,32.2808308603941,22.80777298857,22.2361300005894,17.977886663678,19.2250903178761,27.7345182488553,28.8487327982691,19.9865857089398,19.4376256694233,17.4890469532037,29.3379813783161,28.6569166235994,36.0731204028326,96.1839611608599,54.2128593556834,48.8443605689809,172.791816616879,162.880589557691,178.586140839771,181.78156237913,187.890914902095,179.572131386273,148.445746428599,180.710366184073,12.7006134691926,15.9916844771988,0,63.8362079650317,69.3198471144913,60.4341294536613,31.3898723052681,32.0347491254758,26.6997109426637,33.5291948177678,30.0540013381716,29.6161315349004,68.8655594326408,69.341820954148,78.1909164208763,43.8139152834902,91.788590836168,123.683320879508,124.629565306616,69.1532922829291,87.6890642626327,28.019695211642,29.0144856804538,26.8875039313971,45.0204013062907,46.7049507100173,67.0373719960675,64.5389510142117,60.8339626162838,51.9741750875067,55.5705032593377,58.6934565433352,76.0415261102782,73.1761108299561,105.861537126969,76.0984280716748,97.5914495516749,62.9395946712459,63.0477732008995,63.9387882508201,59.9867067247988,70.6779331045163,56.4682584380938,61.0535650386166,48.7185956903311,98.0031340894559,88.8703873072907,93.5463787530523,68.1852107565102,62.3945729368434,65.6350846901518,102.739343632508,114.803572446463,97.9436768249353,46.8459450903132,45.8436812173111,53.310241506036,67.1691334865342,83.4310023578912,88.4086690540117,76.5777250513434,90.4361873831308,127.369953226525,133.204165576772,111.110668000139,84.1262076589194,15.3387290320252,14.8078022623635,16.2536204274756,115.350760797101,15.3991772897181,10.1922095882658,14.2213340630666,61.2669646061736,59.2862085211731,64.2016045168775,101.852020709401,45.0551917546079,91.5887998029969,55.3418192383973,70.3315254901046,66.6478787070009,81.2395032578636,84.1935143091646,80.552285042322,108.024200899921,95.1463768533019,50.4228014611428,48.5300549842228,43.9474621736183,41.6992717696291,137.92990330141,109.207237285307,114.357901920146,220.714895700223,37.9813944683767,45.592607555499,46.8889137899609,96.9145436949203,78.6901036848038,53.4030996479674,85.5215655346,74.9246289977868,95.9980765865168,82.2563203753531,79.536543167097,92.9320070457395,336.121268716787,73.8650914161524,67.2722690117178,61.1539597793038,66.6229880279792,66.9129391190575,75.4524775588226,88.5265807168312,68.5896623777215,73.2130539191414,50.0117743604194,43.4943984385984,52.4334350008568,51.7301928529077,51.16069385751,46.6657903139703,44.6547236005237,52.9431149737192,54.7726286104323,53.271016772746,55.9802093809317,47.4318019106299,56.7553065154253,50.2373151476231,52.0838418287463,58.8325052924737,51.6794828172717,57.2033504086003,48.8257590547307,60.601212688561,57.5959474697182,93.9037894532425,82.1227040699519,96.1995917258687,97.4802511892265,98.1048921138318,102.621494899294,68.9460902941206,408.397615767974,192.255561964397,48.6297211220333,42.0348376067394,56.7016829817211,82.2868780463237,116.970851062402,144.19102459332,165.610642479035,234.037214662819,168.394589896181,177.469173060707,154.021628824105,170.775687644302,178.530029196497,204.916370178744,78.7121788955289,57.1242563048644,54.0997131230786,70.4633594344787,78.5507573028884,86.6878733844337,102.822609364042,128.420828742254,143.810834702699,140.179178215165,118.877503461947,28.6973581831682,31.0563212278861,37.3271106558857,41.7891850060316,40.0354085189012,64.4203405006992,75.951780287014,108.954872392824,91.1543891784431,46.0058260887535,73.6839076383637,87.6825861451915,84.8665029902295,86.1107584905179,122.540654426295,102.722773732632,37.140316707015,44.4894385686731,46.000918245076,42.2442446919304,55.9470899855665,63.7956957574517,60.8816981316332,56.7486518782288,72.1974888255006,67.2899123734596,71.7721318454932,82.3707363500322,79.4123331612498,69.3639906120652,52.7588513304148,96.3857975117311,86.0922648470765,119.770740130893,106.662634798905,58.0329706633431,101.240841808954,57.738004153175,58.17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| ||
|EntrezGene=103694 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q8R1V4,Q5SVW9 | |||
|association_with_transcript=0bp_to_ENSMUST00000004508,ENSMUST00000130621,ENSMUST00000132147,NM_134020,uc007hye.1_5end | |||
|description=CAGE_peak_1_at_Tmed4_5end | |||
|id=chr11:6174833..6174889,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.48e-16!43;UBERON:0000480!1.50e-12!308;UBERON:0000467!1.50e-12!308;UBERON:0000923!6.82e-11!314;UBERON:0005291!6.82e-11!314;UBERON:0006598!6.82e-11!314;UBERON:0002532!6.82e-11!314;UBERON:0005409!2.83e-10!59;UBERON:0002050!1.01e-09!317;UBERON:0005423!1.01e-09!317;UBERON:0007023!4.84e-09!51;UBERON:0000481!6.26e-08!230;UBERON:0002108!9.45e-08!16;UBERON:0000344!7.94e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.95e-11,31;UBERON:0007023,4.84e-09,51;UBERON:0000344,7.94e-07,15 | |||
|phase1_expression=108.58091833705,201.358810207911,221.129630343315,146.695142483813,142.755283034709,96.5305813493366,113.30213068883,32.2808308603941,22.80777298857,22.2361300005894,17.977886663678,19.2250903178761,27.7345182488553,28.8487327982691,19.9865857089398,19.4376256694233,17.4890469532037,29.3379813783161,28.6569166235994,36.0731204028326,96.1839611608599,54.2128593556834,48.8443605689809,172.791816616879,162.880589557691,178.586140839771,181.78156237913,187.890914902095,179.572131386273,148.445746428599,180.710366184073,12.7006134691926,15.9916844771988,0,63.8362079650317,69.3198471144913,60.4341294536613,31.3898723052681,32.0347491254758,26.6997109426637,33.5291948177678,30.0540013381716,29.6161315349004,68.8655594326408,69.341820954148,78.1909164208763,43.8139152834902,91.788590836168,123.683320879508,124.629565306616,69.1532922829291,87.6890642626327,28.019695211642,29.0144856804538,26.8875039313971,45.0204013062907,46.7049507100173,67.0373719960675,64.5389510142117,60.8339626162838,51.9741750875067,55.5705032593377,58.6934565433352,76.0415261102782,73.1761108299561,105.861537126969,76.0984280716748,97.5914495516749,62.9395946712459,63.0477732008995,63.9387882508201,59.9867067247988,70.6779331045163,56.4682584380938,61.0535650386166,48.7185956903311,98.0031340894559,88.8703873072907,93.5463787530523,68.1852107565102,62.3945729368434,65.6350846901518,102.739343632508,114.803572446463,97.9436768249353,46.8459450903132,45.8436812173111,53.310241506036,67.1691334865342,83.4310023578912,88.4086690540117,76.5777250513434,90.4361873831308,127.369953226525,133.204165576772,111.110668000139,84.1262076589194,15.3387290320252,14.8078022623635,16.2536204274756,115.350760797101,15.3991772897181,10.1922095882658,14.2213340630666,61.2669646061736,59.2862085211731,64.2016045168775,101.852020709401,45.0551917546079,91.5887998029969,55.3418192383973,70.3315254901046,66.6478787070009,81.2395032578636,84.1935143091646,80.552285042322,108.024200899921,95.1463768533019,50.4228014611428,48.5300549842228,43.9474621736183,41.6992717696291,137.92990330141,109.207237285307,114.357901920146,220.714895700223,37.9813944683767,45.592607555499,46.8889137899609,96.9145436949203,78.6901036848038,53.4030996479674,85.5215655346,74.9246289977868,95.9980765865168,82.2563203753531,79.536543167097,92.9320070457395,336.121268716787,73.8650914161524,67.2722690117178,61.1539597793038,66.6229880279792,66.9129391190575,75.4524775588226,88.5265807168312,68.5896623777215,73.2130539191414,50.0117743604194,43.4943984385984,52.4334350008568,51.7301928529077,51.16069385751,46.6657903139703,44.6547236005237,52.9431149737192,54.7726286104323,53.271016772746,55.9802093809317,47.4318019106299,56.7553065154253,50.2373151476231,52.0838418287463,58.8325052924737,51.6794828172717,57.2033504086003,48.8257590547307,60.601212688561,57.5959474697182,93.9037894532425,82.1227040699519,96.1995917258687,97.4802511892265,98.1048921138318,102.621494899294,68.9460902941206,408.397615767974,192.255561964397,48.6297211220333,42.0348376067394,56.7016829817211,82.2868780463237,116.970851062402,144.19102459332,165.610642479035,234.037214662819,168.394589896181,177.469173060707,154.021628824105,170.775687644302,178.530029196497,204.916370178744,78.7121788955289,57.1242563048644,54.0997131230786,70.4633594344787,78.5507573028884,86.6878733844337,102.822609364042,128.420828742254,143.810834702699,140.179178215165,118.877503461947,28.6973581831682,31.0563212278861,37.3271106558857,41.7891850060316,40.0354085189012,64.4203405006992,75.951780287014,108.954872392824,91.1543891784431,46.0058260887535,73.6839076383637,87.6825861451915,84.8665029902295,86.1107584905179,122.540654426295,102.722773732632,37.140316707015,44.4894385686731,46.000918245076,42.2442446919304,55.9470899855665,63.7956957574517,60.8816981316332,56.7486518782288,72.1974888255006,67.2899123734596,71.7721318454932,82.3707363500322,79.4123331612498,69.3639906120652,52.7588513304148,96.3857975117311,86.0922648470765,119.770740130893,106.662634798905,58.0329706633431,101.240841808954,57.738004153175,58.1753729001991,64.6270193198397,56.6356051147548,67.7307969210478,60.0122245272325,68.4130085830571,59.6201950139076,62.0601811376042,80.6516504218736,83.460770102462,75.4998159549162,77.0455317742415,80.0105096416797,155.311811857757,76.7186810249741,82.534331051377,136.55007774327,158.872418369856,123.896364621403,97.1690382312512,107.242450195864,108.73170040734,121.674151805289,127.556516375749,120.668585600379,194.391014885413,66.6226047915848,84.3418618263559,81.0193992419419,103.034675746161,101.848594850782,118.804392874731,164.715537470998,49.7504021095066,88.1221414793492,134.522322813527,36.6047481530086,47.6320058752921,39.9874692273673,36.0504478889472,31.5150527510518,173.431097794761,105.32157154197,27.6810826892521,53.0414250665482,30.0015134338933,24.8646363246192,27.202151316484,21.9627046278262,46.7440682483102,51.0822800981352,47.2643910411129,152.747298882418,44.7615430917307,54.4896171899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| |||
|short_description=p1@Tmed4 | |||
}} | |||
Revision as of 20:17, 12 September 2013
| Short description: | p1@Tmed4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tmed4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:12 |
| Association with transcript: | 0bp_to_ENSMUST00000004508, ENSMUST00000130621, ENSMUST00000132147, NM_134020, uc007hye.1_5end |
| EntrezGene: | Tmed4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.95e-11 | 31 |
| adult organism | 4.84e-09 | 51 |
| mucosa | 7.94e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
