FFCP PHASE1:Hg19::chr2:97536490..97536524,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54910|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10731|TSSclassifier=S|UniProt=C9J4M7|association_with_transcript=0bp_to_ENST00000449330_5end|description=CAGE_peak_5_at_SEMA4C_5end|id=chr2:97536490..97536524,-|ontology_enrichment_celltype=CL:0000148!2.10e-09!10;CL:0000541!2.10e-09!10;CL:0000791!8.61e-08!18;CL:0000789!8.61e-08!18;CL:0002420!8.61e-08!18;CL:0002419!8.61e-08!18;CL:0000790!8.61e-08!18|ontology_enrichment_celltype_v019=CL:0000148;7.74e-24;10!CL:0000147;9.38e-17;14!CL:0002567;3.53e-16;3!CL:0002541;1.64e-15;3!CL:0000710;1.96e-11;20!CL:0000075;3.23e-08;27!CL:0000624;1.52e-07;6!CL:0000623;2.26e-07;3!CL:0000784;3.76e-07;3|ontology_enrichment_celltype_v019_2=CL:0000148,4.84e-24,10;CL:0000541,4.84e-24,10;CL:0000147,6.75e-17,14;CL:0002567,3.83e-16,3;CL:0002541,1.14e-15,3;CL:0000710,1.56e-11,20;CL:0000075,2.76e-08,27;CL:0000624,1.19e-07,6;CL:0000623,2.26e-07,3;CL:0000825,2.26e-07,3;CL:0000784,3.32e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;7.36e-12;4!DOID:1612;7.36e-12;4|ontology_enrichment_disease_v019_2=DOID:5093,6.38e-12,4;DOID:1612,6.38e-12,4|ontology_enrichment_uberon=UBERON:0007023!1.30e-10!115|ontology_enrichment_uberon_v019=UBERON:0003124;1.64e-15;3!UBERON:0000920;1.64e-15;3!UBERON:0005631;3.64e-08;10!UBERON:0000158;3.64e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.14e-15,3;UBERON:0003124,5.81e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0.57470412614962,0.236132343941038,0,2.30297638858328,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.786839080455332,1.96505381374582,1.43921049299656,0,0.32592226663359,2.8406868344084,0,0.334231370655521,0,0.221533894583621,0,0,0.130059347559878,1.47994114143309,1.10540007114339,0.579606171470105,1.03800594213442,0.802622484269139,0,1.0197840842781,1.14966148080576,0.34362744548263,1.01207876807801,0,0,0,0.752875595388864,0.383959833463255,0,0.947109008176067,0.821127996921047,1.61285394579786,0.534880391567015,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.476981248610684,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,2.98440103173194,4.20187268114105,4.68869788840188,6.84289784090821,1.95372236136315,4.80548892550268,2.5724378936752,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.895304816199478,0,0.591092280605782,1.2937654491571,2.31017465303547,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.620304078368662,0.431428401637234,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,7.63698674507764,0,0.460511024178389,0.689182862422653,0,0,0.170453254832202,0.979352392114111,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0.23874448473769,4.45447021248958,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,7.55240507147176,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.461701551022782,0,0.69169171316418,1.07709173291727,0.760531603454056,2.55200927785536,1.83195186803725,6.39641731222362,0,0,0.332423363800313,0.225595660617181,1.17637520590644,0.503464760927528,0,0.953619473882272,0,0,0,0,0,0.176915129006678,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10731 | |||
|TSSclassifier=S | |||
|UniProt=C9J4M7 | |||
|association_with_transcript=0bp_to_ENST00000449330_5end | |||
|description=CAGE_peak_5_at_SEMA4C_5end | |||
|id=chr2:97536490..97536524,- | |||
|ontology_enrichment_celltype=CL:0000148!2.10e-09!10;CL:0000541!2.10e-09!10;CL:0000791!8.61e-08!18;CL:0000789!8.61e-08!18;CL:0002420!8.61e-08!18;CL:0002419!8.61e-08!18;CL:0000790!8.61e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.74e-24;10!CL:0000147;9.38e-17;14!CL:0002567;3.53e-16;3!CL:0002541;1.64e-15;3!CL:0000710;1.96e-11;20!CL:0000075;3.23e-08;27!CL:0000624;1.52e-07;6!CL:0000623;2.26e-07;3!CL:0000784;3.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.84e-24,10;CL:0000541,4.84e-24,10;CL:0000147,6.75e-17,14;CL:0002567,3.83e-16,3;CL:0002541,1.14e-15,3;CL:0000710,1.56e-11,20;CL:0000075,2.76e-08,27;CL:0000624,1.19e-07,6;CL:0000623,2.26e-07,3;CL:0000825,2.26e-07,3;CL:0000784,3.32e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.36e-12;4!DOID:1612;7.36e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.38e-12,4;DOID:1612,6.38e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.64e-15;3!UBERON:0000920;1.64e-15;3!UBERON:0005631;3.64e-08;10!UBERON:0000158;3.64e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.14e-15,3;UBERON:0003124,5.81e-07,7 | |||
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|short_description=p5@SEMA4C | |||
}} |
Revision as of 20:19, 12 September 2013
Short description: | p5@SEMA4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SEMA4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000449330_5end |
EntrezGene: | SEMA4C |
HGNC: | 10731 |
UniProt: | C9J4M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.84e-24 | 10 |
melanoblast | 4.84e-24 | 10 |
pigment cell | 6.75e-17 | 14 |
light melanocyte | 3.83e-16 | 3 |
chorionic membrane mesenchymal stem cell | 1.14e-15 | 3 |
neurecto-epithelial cell | 1.56e-11 | 20 |
columnar/cuboidal epithelial cell | 2.76e-08 | 27 |
CD4-positive, alpha-beta T cell | 1.19e-07 | 6 |
natural killer cell | 2.26e-07 | 3 |
pro-NK cell | 2.26e-07 | 3 |
plasmacytoid dendritic cell | 3.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.14e-15 | 3 |
chorion | 5.81e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.38e-12 | 4 |
breast cancer | 6.38e-12 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.