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FFCP PHASE1:Mm9::chr11:70467596..70467633,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=17|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70467596..70467633,+|id=chr11:70467596..70467633,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.19e-13!63;UBERON:0007811!4.78e-12!86;UBERON:0004121!1.53e-11!102;UBERON:0000924!1.53e-11!102;UBERON:0006601!1.53e-11!102;UBERON:0002346!3.87e-11!71;UBERON:0003075!3.87e-11!71;UBERON:0007284!3.87e-11!71;UBERON:0000475!4.25e-11!200;UBERON:0003056!1.56e-10!49;UBERON:0000955!2.95e-10!50;UBERON:0006238!2.95e-10!50;UBERON:0001049!5.39e-10!52;UBERON:0005068!5.39e-10!52;UBERON:0006241!5.39e-10!52;UBERON:0007135!5.39e-10!52;UBERON:0000153!6.47e-10!94;UBERON:0001017!8.14e-10!73;UBERON:0005743!8.14e-10!73;UBERON:0002616!8.17e-10!49;UBERON:0000073!8.91e-09!75;UBERON:0001016!8.91e-09!75;UBERON:0003080!2.26e-08!40;UBERON:0002780!6.09e-08!39;UBERON:0001890!6.09e-08!39;UBERON:0006240!6.09e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0010371,8.40e-13,73;UBERON:0004121,1.59e-12,95;UBERON:0000924,1.59e-12,95;UBERON:0006601,1.59e-12,95;UBERON:0002346,5.19e-12,64;UBERON:0003075,5.19e-12,64;UBERON:0007284,5.19e-12,64;UBERON:0003056,4.34e-11,49;UBERON:0000073,5.71e-11,54;UBERON:0001049,1.97e-10,52;UBERON:0005068,1.97e-10,52;UBERON:0006241,1.97e-10,52;UBERON:0007135,1.97e-10,52;UBERON:0001017,1.99e-10,73;UBERON:0000955,3.71e-10,47;UBERON:0006238,3.71e-10,47;UBERON:0002616,1.09e-09,46;UBERON:0001016,1.63e-09,75;UBERON:0003080,7.01e-09,40;UBERON:0002780,2.03e-08,39;UBERON:0001890,2.03e-08,39;UBERON:0006240,2.03e-08,39|phase1_expression=3.04282809499109,0.697950815278722,0.909998478779072,1.51232105653415,1.50268718983904,1.17515490338323,1.16806320297763,0.774739940649458,1.54867594366833,1.87251621057595,1.02730780935303,0.478632953972018,3.0816131387617,1.48614684112296,0.999329285446988,1.21485160433896,4.89693314689703,2.20823515750766,2.33094537129756,1.27316895539409,10.5453679787327,0.794327609607082,0,0.639969691173627,1.37645568640302,0,0,1.29282739611533,0.380046838912748,0.504060259519861,0.443461021310609,1.27006134691926,4.30545351309199,15.8481681015439,0.577703239502549,0.498703936075477,1.02084678131185,1.25559489221072,0.7813353445238,3.14114246384279,1.76469446409304,0.683045484958446,0.971020706062307,0.125896817975577,0.608261587317087,0.734187008646726,0,0.872100625521786,0,1.1665793944457,0.699932108126813,1.43752564364972,0.838913030288682,1.45072428402269,1.00828139742739,0.514518872071894,0.85960031981627,1.54701627683233,2.02316460859598,1.05798195854407,1.26766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.19840044207362,1.15265491596466,1.24427534770173,1.21505344498522,2.3135745748652,2.85650984403804,0.883474163806454,1.46988959057945,1.62937300731002,0.919218786610021,1.10115880999389,4.59674417106676,3.07213066512487,2.63772575460388,2.01272815925301,1.04182674111352,3.62937898701795,6.19038871034848,2.90316670775939,1.76777151284201,1.70846016958924,2.79599168737951,0.454357159999104,0.226714680320357,1.73918693221007,1.72084775396277,0.679971333707751,0,0.649776417447669,0.896053774194671,1.12355536105401,0.340860645156116,0,0.35333957451034,2.95771181531029,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,2.62622923353838,1.55362730188303,2.82040064223167,0.693941307064543,0.608930956624282,0.922461989024234,1.05505848386836,2.11659672844269,2.13633205260448,1.73036477414062,2.4581890676385,1.76922110389975,0.808834249737046,2.42925670306433,2.42437626567611,0,6.73395833126558,8.58731497935166,1.02182822083437,0.359445373517761,0.599902730993408,0.762421362438388,3.2953940669061,2.74500361691176,1.63350657746724,4.17178368461463,1.27857728665165,4.1557608911912,1.94689515681309,1.2220723662038,2.48813941220186,3.0326731012041,2.52530227063769,1.43132487258974,0.689706313300419,1.80062129805349,2.26057226753573,3.74200745332303,3.84341160854549,3.46696380870997,4.65666067330228,0.431135985865684,0.378212160335639,0.879755620819744,1.7535658594206,0.278047249225598,1.39300866608867,0.205782136407943,0.59710280045548,0,0,0.852490498186778,0.828503090142008,0.234526059981096,0.540186184383045,0.473489471170421,0,0.617068451549513,0.465067889500816,0.804820204198858,1.16765342367169,0.658239399653922,0.32833492815819,0.729619285912702,0.730999937126662,0.439100230582101,1.20785776884335,2.94405927989778,2.26390147234426,0.330418782983798,0,0.426576501070468,1.39342003116263,0.257734922644187,0.605050573870028,1.11189021922435,0.380451252225118,0.949058123089023,1.15289268306808,1.25667604400135,1.59165177632921,1.16978452271472,3.59527763461689,0.648414149624083,1.99141273254367,1.51734320762465,0.685491075658373,2.25415471346161,1.22190796707189,0.969762435838129,2.73529697572242,2.02356918797623,2.21415221969403,1.41298855057237,2.09775178667061,0.296452627087149,0.500535317148282,0.393117990226406,0.899448449539415,0.811440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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=17
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr11:70467596..70467633,+
|id=chr11:70467596..70467633,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.19e-13!63;UBERON:0007811!4.78e-12!86;UBERON:0004121!1.53e-11!102;UBERON:0000924!1.53e-11!102;UBERON:0006601!1.53e-11!102;UBERON:0002346!3.87e-11!71;UBERON:0003075!3.87e-11!71;UBERON:0007284!3.87e-11!71;UBERON:0000475!4.25e-11!200;UBERON:0003056!1.56e-10!49;UBERON:0000955!2.95e-10!50;UBERON:0006238!2.95e-10!50;UBERON:0001049!5.39e-10!52;UBERON:0005068!5.39e-10!52;UBERON:0006241!5.39e-10!52;UBERON:0007135!5.39e-10!52;UBERON:0000153!6.47e-10!94;UBERON:0001017!8.14e-10!73;UBERON:0005743!8.14e-10!73;UBERON:0002616!8.17e-10!49;UBERON:0000073!8.91e-09!75;UBERON:0001016!8.91e-09!75;UBERON:0003080!2.26e-08!40;UBERON:0002780!6.09e-08!39;UBERON:0001890!6.09e-08!39;UBERON:0006240!6.09e-08!39
|ontology_enrichment_uberon_v019_2=UBERON:0010371,8.40e-13,73;UBERON:0004121,1.59e-12,95;UBERON:0000924,1.59e-12,95;UBERON:0006601,1.59e-12,95;UBERON:0002346,5.19e-12,64;UBERON:0003075,5.19e-12,64;UBERON:0007284,5.19e-12,64;UBERON:0003056,4.34e-11,49;UBERON:0000073,5.71e-11,54;UBERON:0001049,1.97e-10,52;UBERON:0005068,1.97e-10,52;UBERON:0006241,1.97e-10,52;UBERON:0007135,1.97e-10,52;UBERON:0001017,1.99e-10,73;UBERON:0000955,3.71e-10,47;UBERON:0006238,3.71e-10,47;UBERON:0002616,1.09e-09,46;UBERON:0001016,1.63e-09,75;UBERON:0003080,7.01e-09,40;UBERON:0002780,2.03e-08,39;UBERON:0001890,2.03e-08,39;UBERON:0006240,2.03e-08,39
|phase1_expression=3.04282809499109,0.697950815278722,0.909998478779072,1.51232105653415,1.50268718983904,1.17515490338323,1.16806320297763,0.774739940649458,1.54867594366833,1.87251621057595,1.02730780935303,0.478632953972018,3.0816131387617,1.48614684112296,0.999329285446988,1.21485160433896,4.89693314689703,2.20823515750766,2.33094537129756,1.27316895539409,10.5453679787327,0.794327609607082,0,0.639969691173627,1.37645568640302,0,0,1.29282739611533,0.380046838912748,0.504060259519861,0.443461021310609,1.27006134691926,4.30545351309199,15.8481681015439,0.577703239502549,0.498703936075477,1.02084678131185,1.25559489221072,0.7813353445238,3.14114246384279,1.76469446409304,0.683045484958446,0.971020706062307,0.125896817975577,0.608261587317087,0.734187008646726,0,0.872100625521786,0,1.1665793944457,0.699932108126813,1.43752564364972,0.838913030288682,1.45072428402269,1.00828139742739,0.514518872071894,0.85960031981627,1.54701627683233,2.02316460859598,1.05798195854407,1.26766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.19840044207362,1.15265491596466,1.24427534770173,1.21505344498522,2.3135745748652,2.85650984403804,0.883474163806454,1.46988959057945,1.62937300731002,0.919218786610021,1.10115880999389,4.59674417106676,3.07213066512487,2.63772575460388,2.01272815925301,1.04182674111352,3.62937898701795,6.19038871034848,2.90316670775939,1.76777151284201,1.70846016958924,2.79599168737951,0.454357159999104,0.226714680320357,1.73918693221007,1.72084775396277,0.679971333707751,0,0.649776417447669,0.896053774194671,1.12355536105401,0.340860645156116,0,0.35333957451034,2.95771181531029,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,2.62622923353838,1.55362730188303,2.82040064223167,0.693941307064543,0.608930956624282,0.922461989024234,1.05505848386836,2.11659672844269,2.13633205260448,1.73036477414062,2.4581890676385,1.76922110389975,0.808834249737046,2.42925670306433,2.42437626567611,0,6.73395833126558,8.58731497935166,1.02182822083437,0.359445373517761,0.599902730993408,0.762421362438388,3.2953940669061,2.74500361691176,1.63350657746724,4.17178368461463,1.27857728665165,4.1557608911912,1.94689515681309,1.2220723662038,2.48813941220186,3.0326731012041,2.52530227063769,1.43132487258974,0.689706313300419,1.80062129805349,2.26057226753573,3.74200745332303,3.84341160854549,3.46696380870997,4.65666067330228,0.431135985865684,0.378212160335639,0.879755620819744,1.7535658594206,0.278047249225598,1.39300866608867,0.205782136407943,0.59710280045548,0,0,0.852490498186778,0.828503090142008,0.234526059981096,0.540186184383045,0.473489471170421,0,0.617068451549513,0.465067889500816,0.804820204198858,1.16765342367169,0.658239399653922,0.32833492815819,0.729619285912702,0.730999937126662,0.439100230582101,1.20785776884335,2.94405927989778,2.26390147234426,0.330418782983798,0,0.426576501070468,1.39342003116263,0.257734922644187,0.605050573870028,1.11189021922435,0.380451252225118,0.949058123089023,1.15289268306808,1.25667604400135,1.59165177632921,1.16978452271472,3.59527763461689,0.648414149624083,1.99141273254367,1.51734320762465,0.685491075658373,2.25415471346161,1.22190796707189,0.969762435838129,2.73529697572242,2.02356918797623,2.21415221969403,1.41298855057237,2.09775178667061,0.296452627087149,0.500535317148282,0.393117990226406,0.899448449539415,0.811440485554012,0.482354319504834,0.25462585178142,1.43848068725405,2.59416362840057,0.274561413188081,4.31304619582064,1.11642284300551,0.624075346229121,1.51547326768267,0.179397413521912,0.482443521363367,2.77129785249907,0.568474235311454,0.814824882210129,0.339490171550376,1.40814148973101,1.84256883185997,0.952174563544055,4.09780660501378,1.10344600874334,2.21464689648775,2.55127629851979,2.78567635016755,2.59027472798843,4.48412081602686,0,0.54390568381871,0.491764273019036,1.93155722413313,2.72936002979246,3.6335622843583,0,1.26235463602186,0.631016438832513,1.56175497718655,1.07711698866399,0,2.22798674082394,1.41538265394416,0.404810701674894,2.92255857911312,1.58115111178609,3.21321316421807,0.99358059645788,0.712262414669021,1.62886959353576,2.63952196756057,9.2921596837974,0.485561272309963,0.302323556964751,1.32023555829129,0.885905678642318,0.614870295887855,0.775284879504663,2.54473610634254,3.20847640546249,4.74055136903724,4.21674434299995,6.18813259489121,7.14923172082955,0.900305470156551,1.81102157295856,2.35770738534752,3.54680467284547,3.38900753443934,3.78462747384878,2.74018454203139,0.469343416127421,1.69465656691056,1.7642271844397,2.63818004706368,1.77610869365496,0.72375509913787,1.67121281604391,1.64140899745061,1.45740418314925,2.03967832211561,1.36696704638282,1.44470807574256,0,1.88368457004691,0.956859594047176,1.37266903923914,0.509935289981566,0.419854356970974,0.690999869022119,1.90934123603023,0.632671987162271,1.01659733563424,0.648032044930808,0.209088296014469,0.218362563746178,0.674321731924103,2.23164330458407,1.30877970992015,2.46268449254406,1.86401793926078,14.0923234671048,0.448549638131936,0.827292452285488,1.16670713006429,0.774958940866387,0.506868376472335,1.05621514781179,1.69265700297135,0.943734099831398,22.9504914784706,22.4663404881135,1.89606672376907,0,1.33524244314275,1.16928740680016,1.43221356533985,1.39076948346885,1.44234539423963,1.77227432609493,2.01932899896295,2.209997392995,1.51239277705261,1.94915761479505,2.30908419936791,2.80504565235765,1.13365191807606,0.443971906748129,0.448569283047378,0.503653849092235,2.70465431645067,1.50145980360946,1.46521299413812,1.50057865355346,2.00628841614145,4.51801474093653,1.38097570952153,2.29158205375759,2.57779773515531,0,3.0215755895588,3.37511250115903,1.80128481289688,2.71885445390523,3.10656187051092,0.415149390336707,0.798049746802062,1.70733605754134,1.21553358534147,0,0.735374033800057,2.00022055021454,0.824140228955577,0.320919209591815,1.01078884705519,0.760437899670719,1.13175804831646,0.749132059759059,1.08842759088278,1.37845125493472,0.952587382566147,1.62238056322798,1.35036454324594,1.23625770240992,1.03039244094078,0.342869252385415,0.354951612318675,0.953744759789284,1.88950341622027,0.470546902076653,1.26921911837515,1.09756783723664,0.526139422875686,0.950628796921032,0.561142271657738,1.06771516311757,1.18205378850676,1.22769312950907,1.70430525304563,0.964533054905707,0.749431733813838,1.16965804222704,1.93383948643468,4.20834330551455,1.98532277207564,1.15933917810211
|short_description=p@chr11:70467596..70467633,+
}}

Revision as of 20:45, 12 September 2013

Short description:p@chr11:70467596..70467633, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:70467596..70467633, +
Coexpression cluster:MCL_coexpression_mm9:17
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr11:70467596..70467633+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H322.95
testis, neonate N30.CNhs11130.1391-42E222.47
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium8.40e-1373
ectoderm-derived structure1.59e-1295
ectoderm1.59e-1295
presumptive ectoderm1.59e-1295
neurectoderm5.19e-1264
neural plate5.19e-1264
presumptive neural plate5.19e-1264
pre-chordal neural plate4.34e-1149
regional part of nervous system5.71e-1154
neural tube1.97e-1052
neural rod1.97e-1052
future spinal cord1.97e-1052
neural keel1.97e-1052
central nervous system1.99e-1073
brain3.71e-1047
future brain3.71e-1047
regional part of brain1.09e-0946
nervous system1.63e-0975
anterior neural tube7.01e-0940
regional part of forebrain2.03e-0839
forebrain2.03e-0839
future forebrain2.03e-0839







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