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FFCP PHASE1:Mm9::chr11:75323579..75323606,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=280408|HGNC=|MCL_coexpression_id=1236|UniProt=Q5ND29,Q14AQ2|association_with_transcript=0bp_to_ENSMUST00000042972,NM_001029938,uc007kdz.1_5end|description=CAGE_peak_1_at_Rilp_5end|id=chr11:75323579..75323606,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!6.33e-14!47;UBERON:0002365!8.03e-11!25;UBERON:0002330!8.03e-11!25;UBERON:0009854!1.03e-09!23;UBERON:0009856!1.03e-09!23;UBERON:0002107!2.56e-09!22;UBERON:0007499!2.56e-09!22;UBERON:0006925!2.56e-09!22;UBERON:0009497!2.56e-09!22;UBERON:0000015!2.56e-09!22;UBERON:0002423!2.56e-09!22;UBERON:0006235!2.56e-09!22;UBERON:0008835!2.56e-09!22;UBERON:0003894!2.56e-09!22;UBERON:0004161!2.56e-09!22;UBERON:0008836!2.56e-09!22;UBERON:0000466!1.34e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002365,7.86e-14,25;UBERON:0002330,7.86e-14,25;UBERON:0003914,1.17e-13,47;UBERON:0009854,3.04e-12,23;UBERON:0009856,3.04e-12,23;UBERON:0002107,1.13e-11,22;UBERON:0007499,1.13e-11,22;UBERON:0006925,1.13e-11,22;UBERON:0009497,1.13e-11,22;UBERON:0000015,1.13e-11,22;UBERON:0002423,1.13e-11,22;UBERON:0006235,1.13e-11,22;UBERON:0008835,1.13e-11,22;UBERON:0003894,1.13e-11,22;UBERON:0004161,1.13e-11,22;UBERON:0008836,1.13e-11,22|phase1_expression=0.160148847104794,1.74487703819681,0,4.53696316960245,3.50627010962443,1.17515490338323,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.510259740906419,0,0,1.27993938234725,1.14704640533585,0.57423196411502,0,0.861884930743556,2.09025761402011,0.756090389279792,1.33038306393183,0,0,0,0.577703239502549,0.664938581433969,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0.782391344348039,0.436050312760893,0.878744730937887,0.58328969722285,0.139986421625363,0,0,0,0,0.771778308107841,1.14613375975503,2.57836046138721,0,0,0,0,0.889294796111139,1.7997994345628,2.96659908770092,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0.151143120213571,1.15945795480671,7.74381489283248,3.39985666853875,21.0484244738749,12.9955283489534,5.82434953226536,2.80888840263504,0.511290967734173,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,3.65388415100992,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.705532242814229,1.25666591329675,0,3.61498392299779,0.884610551949874,0.647067399789637,1.10420759230197,1.45462575940567,1.86391761218122,0.292780797011547,0.209446706813455,1.78819938646014,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.497627882440372,0.252722758433675,3.99839526184301,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,1.69693824176116,4.18561100550734,5.09719462659276,6.53885917256149,5.43047504714485,10.6708851651412,8.02581214503972,9.0643992203706,7.46470391989572,7.51555945058082,0.210289948564127,0,2.31293148088659,1.58670339998127,0,0,0.128867461322093,0.605050573870028,1.11189021922435,0.951128130562796,1.42358718463353,0.494096864172033,0.754005626400808,0,0.38992817423824,1.79763881730844,1.51296634912286,1.7922714592893,0,0.228497025219458,0,0,0,0.561086559122548,1.45444035385792,3.98547399544926,3.45397201251025,4.07210640941942,11.858105083486,0.166845105716094,0,0.674586337154561,0.405720242777006,1.68824011826692,1.2731292589071,4.31544206176216,5.0261920300261,3.0201755450689,1.43768206527355,6.32639611036456,9.36113019343682,9.09283960609602,6.99649912735457,13.0259750768109,2.40179147216586,0,0,0,0,0.335012514883631,1.90434912708811,4.48807390072937,0.945810864637146,1.7717175171902,1.43509291791738,1.63863314715738,2.07221978239075,2.4590339958857,0,1.08781136763742,2.45882136509518,3.03530420935206,0.160550589987792,0.234423373184406,0,4.54447668967871,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0.534196811001766,0,0.164970122972535,2.65490276679926,0,0.302323556964751,0.943025398779491,0.590603785761546,0.922305443831782,1.29214146584111,1.45413491791002,0.356497378384721,0.948110273807448,3.16255825724996,3.09406629744561,0,0.36012218806262,0,0,0,0,0,0,0,0.847328283455281,0,0.49465875882444,0.484393280087717,0.241251699712623,0.477489376012546,0.328281799490123,1.1659233465194,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.495920734352016,1.04702376793612,1.29614973291793,3.72803587852155,0,0.299033092087958,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.58678619322877,1.3020438484395,0.419437377702843,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0,0,2.26730383615211,0.443971906748129,0.358855426437903,0.671538465456314,0,0.750729901804728,0.549454872801795,0,1.50471631210609,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,1.55572709461131,1.85431551515005,0.320919209591815,2.27427490587418,2.5347929989024,1.50901073108861,1.40462261204824,1.21647789569252,1.37845125493472,3.33405583898152,1.50649623728312,1.73618298417335,3.29668720642645,0.588795680537589,0,1.77475806159337,1.43061713968393,0.726732083161643,1.50575008664529,1.18460451048347,1.46342378298218,1.57841826862706,1.7654534799962,0.561142271657738,1.06771516311757,0.788035859004508,1.22769312950907,0.619747364743864,0.771626443924566,0.499621155875892,1.40358965067245,2.36358159453128,2.86932498103265,2.20591419119516,3.2461496986859|short_description=p1@Rilp}}
|EntrezGene=280408
|HGNC=
|MCL_coexpression_id=1236
|UniProt=Q5ND29,Q14AQ2
|association_with_transcript=0bp_to_ENSMUST00000042972,NM_001029938,uc007kdz.1_5end
|description=CAGE_peak_1_at_Rilp_5end
|id=chr11:75323579..75323606,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!6.33e-14!47;UBERON:0002365!8.03e-11!25;UBERON:0002330!8.03e-11!25;UBERON:0009854!1.03e-09!23;UBERON:0009856!1.03e-09!23;UBERON:0002107!2.56e-09!22;UBERON:0007499!2.56e-09!22;UBERON:0006925!2.56e-09!22;UBERON:0009497!2.56e-09!22;UBERON:0000015!2.56e-09!22;UBERON:0002423!2.56e-09!22;UBERON:0006235!2.56e-09!22;UBERON:0008835!2.56e-09!22;UBERON:0003894!2.56e-09!22;UBERON:0004161!2.56e-09!22;UBERON:0008836!2.56e-09!22;UBERON:0000466!1.34e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0002365,7.86e-14,25;UBERON:0002330,7.86e-14,25;UBERON:0003914,1.17e-13,47;UBERON:0009854,3.04e-12,23;UBERON:0009856,3.04e-12,23;UBERON:0002107,1.13e-11,22;UBERON:0007499,1.13e-11,22;UBERON:0006925,1.13e-11,22;UBERON:0009497,1.13e-11,22;UBERON:0000015,1.13e-11,22;UBERON:0002423,1.13e-11,22;UBERON:0006235,1.13e-11,22;UBERON:0008835,1.13e-11,22;UBERON:0003894,1.13e-11,22;UBERON:0004161,1.13e-11,22;UBERON:0008836,1.13e-11,22
|phase1_expression=0.160148847104794,1.74487703819681,0,4.53696316960245,3.50627010962443,1.17515490338323,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.510259740906419,0,0,1.27993938234725,1.14704640533585,0.57423196411502,0,0.861884930743556,2.09025761402011,0.756090389279792,1.33038306393183,0,0,0,0.577703239502549,0.664938581433969,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0.782391344348039,0.436050312760893,0.878744730937887,0.58328969722285,0.139986421625363,0,0,0,0,0.771778308107841,1.14613375975503,2.57836046138721,0,0,0,0,0.889294796111139,1.7997994345628,2.96659908770092,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0.151143120213571,1.15945795480671,7.74381489283248,3.39985666853875,21.0484244738749,12.9955283489534,5.82434953226536,2.80888840263504,0.511290967734173,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,3.65388415100992,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.705532242814229,1.25666591329675,0,3.61498392299779,0.884610551949874,0.647067399789637,1.10420759230197,1.45462575940567,1.86391761218122,0.292780797011547,0.209446706813455,1.78819938646014,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.497627882440372,0.252722758433675,3.99839526184301,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,1.69693824176116,4.18561100550734,5.09719462659276,6.53885917256149,5.43047504714485,10.6708851651412,8.02581214503972,9.0643992203706,7.46470391989572,7.51555945058082,0.210289948564127,0,2.31293148088659,1.58670339998127,0,0,0.128867461322093,0.605050573870028,1.11189021922435,0.951128130562796,1.42358718463353,0.494096864172033,0.754005626400808,0,0.38992817423824,1.79763881730844,1.51296634912286,1.7922714592893,0,0.228497025219458,0,0,0,0.561086559122548,1.45444035385792,3.98547399544926,3.45397201251025,4.07210640941942,11.858105083486,0.166845105716094,0,0.674586337154561,0.405720242777006,1.68824011826692,1.2731292589071,4.31544206176216,5.0261920300261,3.0201755450689,1.43768206527355,6.32639611036456,9.36113019343682,9.09283960609602,6.99649912735457,13.0259750768109,2.40179147216586,0,0,0,0,0.335012514883631,1.90434912708811,4.48807390072937,0.945810864637146,1.7717175171902,1.43509291791738,1.63863314715738,2.07221978239075,2.4590339958857,0,1.08781136763742,2.45882136509518,3.03530420935206,0.160550589987792,0.234423373184406,0,4.54447668967871,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0.534196811001766,0,0.164970122972535,2.65490276679926,0,0.302323556964751,0.943025398779491,0.590603785761546,0.922305443831782,1.29214146584111,1.45413491791002,0.356497378384721,0.948110273807448,3.16255825724996,3.09406629744561,0,0.36012218806262,0,0,0,0,0,0,0,0.847328283455281,0,0.49465875882444,0.484393280087717,0.241251699712623,0.477489376012546,0.328281799490123,1.1659233465194,0,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.495920734352016,1.04702376793612,1.29614973291793,3.72803587852155,0,0.299033092087958,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.58678619322877,1.3020438484395,0.419437377702843,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0,0,2.26730383615211,0.443971906748129,0.358855426437903,0.671538465456314,0,0.750729901804728,0.549454872801795,0,1.50471631210609,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,1.55572709461131,1.85431551515005,0.320919209591815,2.27427490587418,2.5347929989024,1.50901073108861,1.40462261204824,1.21647789569252,1.37845125493472,3.33405583898152,1.50649623728312,1.73618298417335,3.29668720642645,0.588795680537589,0,1.77475806159337,1.43061713968393,0.726732083161643,1.50575008664529,1.18460451048347,1.46342378298218,1.57841826862706,1.7654534799962,0.561142271657738,1.06771516311757,0.788035859004508,1.22769312950907,0.619747364743864,0.771626443924566,0.499621155875892,1.40358965067245,2.36358159453128,2.86932498103265,2.20591419119516,3.2461496986859
|short_description=p1@Rilp
}}

Revision as of 20:54, 12 September 2013

Short description:p1@Rilp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rilp_5end
Coexpression cluster:MCL_coexpression_mm9:1236
Association with transcript: 0bp_to_ENSMUST00000042972, NM_001029938, uc007kdz.1_5end
EntrezGene:Rilp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rilp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E36.54
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G110.67
heart, neonate N16.CNhs11209.782-15G18.03
heart, neonate N20.CNhs11127.821-26I69.06
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D27.52
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B211.86
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A39.09
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland7.86e-1425
exocrine system7.86e-1425
epithelial tube1.17e-1347
digestive tract diverticulum3.04e-1223
sac3.04e-1223
liver1.13e-1122
epithelial sac1.13e-1122
digestive gland1.13e-1122
epithelium of foregut-midgut junction1.13e-1122
anatomical boundary1.13e-1122
hepatobiliary system1.13e-1122
foregut-midgut junction1.13e-1122
hepatic diverticulum1.13e-1122
liver primordium1.13e-1122
septum transversum1.13e-1122
liver bud1.13e-1122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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