FFCP PHASE1:Mm9::chr11:78776834..78776858,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=344|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:78776834..78776858,-|id=chr11:78776834..78776858,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,6.60e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.87e-18!130;UBERON:0000925!5.87e-18!130;UBERON:0006595!5.87e-18!130;UBERON:0001007!9.67e-17!128;UBERON:0001555!9.67e-17!128;UBERON:0007026!9.67e-17!128;UBERON:0004921!3.72e-16!126;UBERON:0004185!3.72e-16!126;UBERON:0002405!7.04e-15!70;UBERON:0005057!6.92e-14!51;UBERON:0003929!5.86e-13!55;UBERON:0005911!1.30e-11!69;UBERON:0000490!1.86e-11!66;UBERON:0000077!8.06e-10!97;UBERON:0001041!1.89e-09!92;UBERON:0002107!8.82e-09!22;UBERON:0007499!8.82e-09!22;UBERON:0006925!8.82e-09!22;UBERON:0009497!8.82e-09!22;UBERON:0000015!8.82e-09!22;UBERON:0002423!8.82e-09!22;UBERON:0006235!8.82e-09!22;UBERON:0008835!8.82e-09!22;UBERON:0003894!8.82e-09!22;UBERON:0004161!8.82e-09!22;UBERON:0008836!8.82e-09!22;UBERON:0002368!4.61e-08!60;UBERON:0009854!4.97e-08!23;UBERON:0009856!4.97e-08!23;UBERON:0003104!2.26e-07!131;UBERON:0009142!2.26e-07!131;UBERON:0002193!2.44e-07!48;UBERON:0002390!2.51e-07!45;UBERON:0003061!2.51e-07!45;UBERON:0005409!3.94e-07!59;UBERON:0000926!4.05e-07!193;UBERON:0004120!4.05e-07!193;UBERON:0006603!4.05e-07!193;UBERON:0002530!5.08e-07!65;UBERON:0002365!9.70e-07!25;UBERON:0002330!9.70e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.38e-15,118;UBERON:0000925,5.38e-15,118;UBERON:0006595,5.38e-15,118;UBERON:0003929,6.58e-14,55;UBERON:0002107,1.13e-13,22;UBERON:0007499,1.13e-13,22;UBERON:0006925,1.13e-13,22;UBERON:0009497,1.13e-13,22;UBERON:0000015,1.13e-13,22;UBERON:0002423,1.13e-13,22;UBERON:0006235,1.13e-13,22;UBERON:0008835,1.13e-13,22;UBERON:0003894,1.13e-13,22;UBERON:0004161,1.13e-13,22;UBERON:0008836,1.13e-13,22;UBERON:0004921,1.87e-13,114;UBERON:0001007,4.40e-13,116;UBERON:0001555,4.40e-13,116;UBERON:0007026,4.40e-13,116;UBERON:0009854,6.08e-13,23;UBERON:0009856,6.08e-13,23;UBERON:0002365,1.17e-11,25;UBERON:0002330,1.17e-11,25;UBERON:0000490,1.16e-10,66;UBERON:0002368,5.42e-10,60;UBERON:0005911,5.85e-10,69;UBERON:0002530,8.05e-10,65;UBERON:0000949,1.71e-08,72;UBERON:0001041,3.99e-08,80;UBERON:0005631,4.89e-07,3;UBERON:0000478,4.89e-07,3;UBERON:0000158,4.89e-07,3|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0.467225281191051,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0,0.171200729931206,0.0874204024189974,0.666219523631325,0.607425802169478,0,0.473193248037357,0.137114433605739,0,0.255129870453209,0.198581902401771,0,0.639969691173627,0.22940928106717,0,0,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,0.288851619751275,1.16364251750945,1.02084678131185,0.837063261473815,0,0,0.588231488031014,0,0,0.503587271902309,0.304130793658544,0.917733760808408,1.56478268869608,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0.677689064138264,0,1.3498495759221,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,1.3599426674155,2.69851595818909,3.24888208723835,1.79210754838934,0.983110940922263,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,2.47194967734374,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,5.36459815938042,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0.710234206755631,0,0,0,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,1.32167513193519,1.85115396664481,0,0,0,0.605050573870028,0.667134131534611,0.380451252225118,6.64340686162316,0.823494773620054,0.502670417600539,0.994782360205754,1.55971269695296,8.08937467788799,6.70027954611552,1.39398891278057,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,7.94462611197673,1.92192989231657,5.75072826109418,2.23284568601102,1.5601883655728,1.51547326768267,1.4351793081753,3.37710464954357,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.975668239288994,0.157635144106191,0.221464689648775,0.478364305972461,0,0.172684981865896,0.144649058581512,3.01582567878545,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,2.06271086496374,0,0,0,0.214337035031592,0,0,0,0.608929898229199,3.52007562095566,1.48282449604674,0,0.16488625294148,0.645857706783622,0,0,0.164140899745061,5.53813589596716,0,0.854354403989263,0,0.370389054739423,0.941842285023455,0.820165366326151,0.915112692826091,0.169978429993855,0.279902904647316,0.138199973804424,4.77335309007557,0,0,0,0.209088296014469,0.436725127492355,0.539457385539283,0.578574190077352,2.35580347785627,0.518459893167171,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.314578033277133,0,0,2.21207784439725,1.21635129174099,1.64337531463724,1.68897069871134,1.07416017400489,0.79472541912506,0.961563596159751,0.147689527174577,0.605798699688886,1.06689529317,1.00826185136841,0.779663045918019,0.769694733122636,1.8700304349051,0,0.221985953374065,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,1.07435527024149,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p@chr11:78776834..78776858,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=344 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:78776834..78776858,- | |||
|id=chr11:78776834..78776858,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.60e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.87e-18!130;UBERON:0000925!5.87e-18!130;UBERON:0006595!5.87e-18!130;UBERON:0001007!9.67e-17!128;UBERON:0001555!9.67e-17!128;UBERON:0007026!9.67e-17!128;UBERON:0004921!3.72e-16!126;UBERON:0004185!3.72e-16!126;UBERON:0002405!7.04e-15!70;UBERON:0005057!6.92e-14!51;UBERON:0003929!5.86e-13!55;UBERON:0005911!1.30e-11!69;UBERON:0000490!1.86e-11!66;UBERON:0000077!8.06e-10!97;UBERON:0001041!1.89e-09!92;UBERON:0002107!8.82e-09!22;UBERON:0007499!8.82e-09!22;UBERON:0006925!8.82e-09!22;UBERON:0009497!8.82e-09!22;UBERON:0000015!8.82e-09!22;UBERON:0002423!8.82e-09!22;UBERON:0006235!8.82e-09!22;UBERON:0008835!8.82e-09!22;UBERON:0003894!8.82e-09!22;UBERON:0004161!8.82e-09!22;UBERON:0008836!8.82e-09!22;UBERON:0002368!4.61e-08!60;UBERON:0009854!4.97e-08!23;UBERON:0009856!4.97e-08!23;UBERON:0003104!2.26e-07!131;UBERON:0009142!2.26e-07!131;UBERON:0002193!2.44e-07!48;UBERON:0002390!2.51e-07!45;UBERON:0003061!2.51e-07!45;UBERON:0005409!3.94e-07!59;UBERON:0000926!4.05e-07!193;UBERON:0004120!4.05e-07!193;UBERON:0006603!4.05e-07!193;UBERON:0002530!5.08e-07!65;UBERON:0002365!9.70e-07!25;UBERON:0002330!9.70e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.38e-15,118;UBERON:0000925,5.38e-15,118;UBERON:0006595,5.38e-15,118;UBERON:0003929,6.58e-14,55;UBERON:0002107,1.13e-13,22;UBERON:0007499,1.13e-13,22;UBERON:0006925,1.13e-13,22;UBERON:0009497,1.13e-13,22;UBERON:0000015,1.13e-13,22;UBERON:0002423,1.13e-13,22;UBERON:0006235,1.13e-13,22;UBERON:0008835,1.13e-13,22;UBERON:0003894,1.13e-13,22;UBERON:0004161,1.13e-13,22;UBERON:0008836,1.13e-13,22;UBERON:0004921,1.87e-13,114;UBERON:0001007,4.40e-13,116;UBERON:0001555,4.40e-13,116;UBERON:0007026,4.40e-13,116;UBERON:0009854,6.08e-13,23;UBERON:0009856,6.08e-13,23;UBERON:0002365,1.17e-11,25;UBERON:0002330,1.17e-11,25;UBERON:0000490,1.16e-10,66;UBERON:0002368,5.42e-10,60;UBERON:0005911,5.85e-10,69;UBERON:0002530,8.05e-10,65;UBERON:0000949,1.71e-08,72;UBERON:0001041,3.99e-08,80;UBERON:0005631,4.89e-07,3;UBERON:0000478,4.89e-07,3;UBERON:0000158,4.89e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0.467225281191051,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0,0.171200729931206,0.0874204024189974,0.666219523631325,0.607425802169478,0,0.473193248037357,0.137114433605739,0,0.255129870453209,0.198581902401771,0,0.639969691173627,0.22940928106717,0,0,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,0.288851619751275,1.16364251750945,1.02084678131185,0.837063261473815,0,0,0.588231488031014,0,0,0.503587271902309,0.304130793658544,0.917733760808408,1.56478268869608,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0.677689064138264,0,1.3498495759221,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,1.3599426674155,2.69851595818909,3.24888208723835,1.79210754838934,0.983110940922263,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,2.47194967734374,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,5.36459815938042,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0.710234206755631,0,0,0,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,1.32167513193519,1.85115396664481,0,0,0,0.605050573870028,0.667134131534611,0.380451252225118,6.64340686162316,0.823494773620054,0.502670417600539,0.994782360205754,1.55971269695296,8.08937467788799,6.70027954611552,1.39398891278057,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,7.94462611197673,1.92192989231657,5.75072826109418,2.23284568601102,1.5601883655728,1.51547326768267,1.4351793081753,3.37710464954357,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.975668239288994,0.157635144106191,0.221464689648775,0.478364305972461,0,0.172684981865896,0.144649058581512,3.01582567878545,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,2.06271086496374,0,0,0,0.214337035031592,0,0,0,0.608929898229199,3.52007562095566,1.48282449604674,0,0.16488625294148,0.645857706783622,0,0,0.164140899745061,5.53813589596716,0,0.854354403989263,0,0.370389054739423,0.941842285023455,0.820165366326151,0.915112692826091,0.169978429993855,0.279902904647316,0.138199973804424,4.77335309007557,0,0,0,0.209088296014469,0.436725127492355,0.539457385539283,0.578574190077352,2.35580347785627,0.518459893167171,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.314578033277133,0,0,2.21207784439725,1.21635129174099,1.64337531463724,1.68897069871134,1.07416017400489,0.79472541912506,0.961563596159751,0.147689527174577,0.605798699688886,1.06689529317,1.00826185136841,0.779663045918019,0.769694733122636,1.8700304349051,0,0.221985953374065,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,1.07435527024149,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr11:78776834..78776858,- | |||
}} |
Revision as of 21:04, 12 September 2013
Short description: | p@chr11:78776834..78776858, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:78776834..78776858, - |
Coexpression cluster: | MCL_coexpression_mm9:344 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.60e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.38e-15 | 118 |
endoderm | 5.38e-15 | 118 |
presumptive endoderm | 5.38e-15 | 118 |
gut epithelium | 6.58e-14 | 55 |
liver | 1.13e-13 | 22 |
epithelial sac | 1.13e-13 | 22 |
digestive gland | 1.13e-13 | 22 |
epithelium of foregut-midgut junction | 1.13e-13 | 22 |
anatomical boundary | 1.13e-13 | 22 |
hepatobiliary system | 1.13e-13 | 22 |
foregut-midgut junction | 1.13e-13 | 22 |
hepatic diverticulum | 1.13e-13 | 22 |
liver primordium | 1.13e-13 | 22 |
septum transversum | 1.13e-13 | 22 |
liver bud | 1.13e-13 | 22 |
subdivision of digestive tract | 1.87e-13 | 114 |
digestive system | 4.40e-13 | 116 |
digestive tract | 4.40e-13 | 116 |
primitive gut | 4.40e-13 | 116 |
digestive tract diverticulum | 6.08e-13 | 23 |
sac | 6.08e-13 | 23 |
exocrine gland | 1.17e-11 | 25 |
exocrine system | 1.17e-11 | 25 |
unilaminar epithelium | 1.16e-10 | 66 |
endocrine gland | 5.42e-10 | 60 |
endo-epithelium | 5.85e-10 | 69 |
gland | 8.05e-10 | 65 |
endocrine system | 1.71e-08 | 72 |
foregut | 3.99e-08 | 80 |
extraembryonic membrane | 4.89e-07 | 3 |
extraembryonic structure | 4.89e-07 | 3 |
membranous layer | 4.89e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.