FFCP PHASE1:Mm9::chr11:99290206..99290211,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:99290206..99290211,-|id=chr11:99290206..99290211,-|ontology_enrichment_celltype=CL:0000239!2.02e-17!6;CL:0000677!2.02e-17!6;CL:0000212!2.02e-17!6;CL:0000584!2.02e-17!6;CL:0000075!7.61e-15!7;CL:0000066!2.88e-12!25;CL:0002563!2.08e-11!9;CL:0002251!2.08e-11!9;CL:0002076!3.12e-11!15;CL:0000473!5.39e-10!3;CL:0000627!5.39e-10!3;CL:0000682!5.39e-10!3;CL:0000223!4.08e-08!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-10,6;CL:0000677,1.39e-10,6;CL:0000584,1.39e-10,6;CL:0000682,4.52e-10,3;CL:0000075,3.74e-09,7;CL:0002563,3.09e-07,9;CL:0002251,3.09e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.68e-27!15;UBERON:0001242!4.88e-22!13;UBERON:0000060!4.88e-22!13;UBERON:0001262!4.88e-22!13;UBERON:0004786!4.88e-22!13;UBERON:0000160!4.62e-19!43;UBERON:0004923!3.04e-16!24;UBERON:0005409!4.06e-16!59;UBERON:0003350!2.08e-11!9;UBERON:0004808!2.08e-11!9;UBERON:0001277!2.08e-11!9;UBERON:0000331!2.04e-10!3;UBERON:0002116!2.04e-10!3;UBERON:0001204!2.04e-10!3;UBERON:0001168!2.04e-10!3;UBERON:0001007!1.57e-09!128;UBERON:0001555!1.57e-09!128;UBERON:0007026!1.57e-09!128;UBERON:0004119!2.64e-09!130;UBERON:0000925!2.64e-09!130;UBERON:0006595!2.64e-09!130;UBERON:0000485!3.23e-09!11;UBERON:0004921!1.09e-07!126;UBERON:0004185!1.09e-07!126;UBERON:0001962!2.85e-07!2;UBERON:0001961!2.85e-07!2;UBERON:0001744!2.85e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.82e-28,15;UBERON:0001242,3.74e-25,13;UBERON:0001262,3.74e-25,13;UBERON:0004786,3.74e-25,13;UBERON:0000331,2.08e-21,3;UBERON:0002116,2.08e-21,3;UBERON:0001204,2.08e-21,3;UBERON:0001168,2.08e-21,3;UBERON:0000160,7.40e-21,31;UBERON:0004923,1.41e-17,24;UBERON:0002108,3.17e-16,4;UBERON:0005409,1.92e-13,47;UBERON:0003199,2.16e-08,1;UBERON:0003350,3.09e-07,9;UBERON:0004808,3.09e-07,9;UBERON:0001277,3.09e-07,9|phase1_expression=0,1.39590163055744,0.454999239389536,0.30246421130683,2.00358291978539,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,2.98232065387321,2.8711598205751,0.86152399231815,1.72376986148711,6.65081968097309,2.01624103807945,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,3.43785736662608,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:99290206..99290211,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:99290206..99290211,- | |||
|id=chr11:99290206..99290211,- | |||
|ontology_enrichment_celltype=CL:0000239!2.02e-17!6;CL:0000677!2.02e-17!6;CL:0000212!2.02e-17!6;CL:0000584!2.02e-17!6;CL:0000075!7.61e-15!7;CL:0000066!2.88e-12!25;CL:0002563!2.08e-11!9;CL:0002251!2.08e-11!9;CL:0002076!3.12e-11!15;CL:0000473!5.39e-10!3;CL:0000627!5.39e-10!3;CL:0000682!5.39e-10!3;CL:0000223!4.08e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-10,6;CL:0000677,1.39e-10,6;CL:0000584,1.39e-10,6;CL:0000682,4.52e-10,3;CL:0000075,3.74e-09,7;CL:0002563,3.09e-07,9;CL:0002251,3.09e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.68e-27!15;UBERON:0001242!4.88e-22!13;UBERON:0000060!4.88e-22!13;UBERON:0001262!4.88e-22!13;UBERON:0004786!4.88e-22!13;UBERON:0000160!4.62e-19!43;UBERON:0004923!3.04e-16!24;UBERON:0005409!4.06e-16!59;UBERON:0003350!2.08e-11!9;UBERON:0004808!2.08e-11!9;UBERON:0001277!2.08e-11!9;UBERON:0000331!2.04e-10!3;UBERON:0002116!2.04e-10!3;UBERON:0001204!2.04e-10!3;UBERON:0001168!2.04e-10!3;UBERON:0001007!1.57e-09!128;UBERON:0001555!1.57e-09!128;UBERON:0007026!1.57e-09!128;UBERON:0004119!2.64e-09!130;UBERON:0000925!2.64e-09!130;UBERON:0006595!2.64e-09!130;UBERON:0000485!3.23e-09!11;UBERON:0004921!1.09e-07!126;UBERON:0004185!1.09e-07!126;UBERON:0001962!2.85e-07!2;UBERON:0001961!2.85e-07!2;UBERON:0001744!2.85e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.82e-28,15;UBERON:0001242,3.74e-25,13;UBERON:0001262,3.74e-25,13;UBERON:0004786,3.74e-25,13;UBERON:0000331,2.08e-21,3;UBERON:0002116,2.08e-21,3;UBERON:0001204,2.08e-21,3;UBERON:0001168,2.08e-21,3;UBERON:0000160,7.40e-21,31;UBERON:0004923,1.41e-17,24;UBERON:0002108,3.17e-16,4;UBERON:0005409,1.92e-13,47;UBERON:0003199,2.16e-08,1;UBERON:0003350,3.09e-07,9;UBERON:0004808,3.09e-07,9;UBERON:0001277,3.09e-07,9 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,0.30246421130683,2.00358291978539,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,2.98232065387321,2.8711598205751,0.86152399231815,1.72376986148711,6.65081968097309,2.01624103807945,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,3.43785736662608,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:99290206..99290211,- | |||
}} |
Revision as of 21:54, 12 September 2013
Short description: | p@chr11:99290206..99290211, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:99290206..99290211, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.39e-10 | 6 |
gut absorptive cell | 1.39e-10 | 6 |
enterocyte | 1.39e-10 | 6 |
M cell of gut | 4.52e-10 | 3 |
columnar/cuboidal epithelial cell | 3.74e-09 | 7 |
intestinal epithelial cell | 3.09e-07 | 9 |
epithelial cell of alimentary canal | 3.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.82e-28 | 15 |
intestinal mucosa | 3.74e-25 | 13 |
wall of intestine | 3.74e-25 | 13 |
gastrointestinal system mucosa | 3.74e-25 | 13 |
ileal mucosa | 2.08e-21 | 3 |
ileum | 2.08e-21 | 3 |
mucosa of small intestine | 2.08e-21 | 3 |
wall of small intestine | 2.08e-21 | 3 |
intestine | 7.40e-21 | 31 |
organ component layer | 1.41e-17 | 24 |
small intestine | 3.17e-16 | 4 |
gastrointestinal system | 1.92e-13 | 47 |
egg chamber | 2.16e-08 | 1 |
epithelium of mucosa | 3.09e-07 | 9 |
gastrointestinal system epithelium | 3.09e-07 | 9 |
intestinal epithelium | 3.09e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.