FFCP PHASE1:Mm9::chr11:99294870..99294876,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=217|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:99294870..99294876,-|id=chr11:99294870..99294876,-|ontology_enrichment_celltype=CL:0002563!4.26e-09!9;CL:0002251!4.26e-09!9;CL:0000239!7.42e-09!6;CL:0000677!7.42e-09!6;CL:0000212!7.42e-09!6;CL:0000584!7.42e-09!6;CL:0000066!6.47e-08!25;CL:0002076!1.72e-07!15;CL:0000075!1.98e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,7.41e-13,6;CL:0000677,7.41e-13,6;CL:0000584,7.41e-13,6;CL:0000075,5.45e-11,7;CL:0000682,5.21e-10,3;CL:0002563,1.70e-08,9;CL:0002251,1.70e-08,9;CL:0000066,7.33e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.82e-24!59;UBERON:0000160!1.40e-21!43;UBERON:0000344!5.08e-17!15;UBERON:0001007!2.77e-15!128;UBERON:0001555!2.77e-15!128;UBERON:0007026!2.77e-15!128;UBERON:0004119!7.77e-15!130;UBERON:0000925!7.77e-15!130;UBERON:0006595!7.77e-15!130;UBERON:0001242!2.30e-14!13;UBERON:0000060!2.30e-14!13;UBERON:0001262!2.30e-14!13;UBERON:0004786!2.30e-14!13;UBERON:0004921!1.18e-13!126;UBERON:0004185!1.18e-13!126;UBERON:0003350!4.26e-09!9;UBERON:0004808!4.26e-09!9;UBERON:0001277!4.26e-09!9;UBERON:0004923!4.32e-09!24;UBERON:0000485!4.00e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.39e-24,31;UBERON:0000344,5.48e-24,15;UBERON:0005409,2.94e-19,47;UBERON:0001242,1.45e-18,13;UBERON:0001262,1.45e-18,13;UBERON:0004786,1.45e-18,13;UBERON:0004923,3.15e-14,24;UBERON:0002108,2.12e-13,4;UBERON:0000331,3.13e-10,3;UBERON:0002116,3.13e-10,3;UBERON:0001204,3.13e-10,3;UBERON:0001168,3.13e-10,3;UBERON:0003350,1.70e-08,9;UBERON:0004808,1.70e-08,9;UBERON:0001277,1.70e-08,9;UBERON:0001007,1.89e-08,116;UBERON:0001555,1.89e-08,116;UBERON:0007026,1.89e-08,116;UBERON:0004119,3.10e-08,118;UBERON:0000925,3.10e-08,118;UBERON:0006595,3.10e-08,118;UBERON:0001962,1.69e-07,2;UBERON:0001961,1.69e-07,2;UBERON:0001744,1.69e-07,2;UBERON:0000485,6.64e-07,11|phase1_expression=0,1.39590163055744,5.45999087267443,1.51232105653415,4.00716583957078,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,4.81759490241057,2.8711598205751,4.73838195774982,1.29282739611533,2.47030445293286,2.77233142735924,3.10422714917427,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0,1.7127581957859,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,1.32225283331772,0.213288250535234,0,0,0,0,0.190225626112559,9.96511029243474,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,14.3811105384675,13.6166971421057,9.95706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,1.81766864738753,1.42598951353889,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03590593552537,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0.87345025498471,0.809186078308924,0.909188012978695,0.523511883968059,7.51766845092399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:99294870..99294876,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=217 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:99294870..99294876,- | |||
|id=chr11:99294870..99294876,- | |||
|ontology_enrichment_celltype=CL:0002563!4.26e-09!9;CL:0002251!4.26e-09!9;CL:0000239!7.42e-09!6;CL:0000677!7.42e-09!6;CL:0000212!7.42e-09!6;CL:0000584!7.42e-09!6;CL:0000066!6.47e-08!25;CL:0002076!1.72e-07!15;CL:0000075!1.98e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.41e-13,6;CL:0000677,7.41e-13,6;CL:0000584,7.41e-13,6;CL:0000075,5.45e-11,7;CL:0000682,5.21e-10,3;CL:0002563,1.70e-08,9;CL:0002251,1.70e-08,9;CL:0000066,7.33e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.82e-24!59;UBERON:0000160!1.40e-21!43;UBERON:0000344!5.08e-17!15;UBERON:0001007!2.77e-15!128;UBERON:0001555!2.77e-15!128;UBERON:0007026!2.77e-15!128;UBERON:0004119!7.77e-15!130;UBERON:0000925!7.77e-15!130;UBERON:0006595!7.77e-15!130;UBERON:0001242!2.30e-14!13;UBERON:0000060!2.30e-14!13;UBERON:0001262!2.30e-14!13;UBERON:0004786!2.30e-14!13;UBERON:0004921!1.18e-13!126;UBERON:0004185!1.18e-13!126;UBERON:0003350!4.26e-09!9;UBERON:0004808!4.26e-09!9;UBERON:0001277!4.26e-09!9;UBERON:0004923!4.32e-09!24;UBERON:0000485!4.00e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.39e-24,31;UBERON:0000344,5.48e-24,15;UBERON:0005409,2.94e-19,47;UBERON:0001242,1.45e-18,13;UBERON:0001262,1.45e-18,13;UBERON:0004786,1.45e-18,13;UBERON:0004923,3.15e-14,24;UBERON:0002108,2.12e-13,4;UBERON:0000331,3.13e-10,3;UBERON:0002116,3.13e-10,3;UBERON:0001204,3.13e-10,3;UBERON:0001168,3.13e-10,3;UBERON:0003350,1.70e-08,9;UBERON:0004808,1.70e-08,9;UBERON:0001277,1.70e-08,9;UBERON:0001007,1.89e-08,116;UBERON:0001555,1.89e-08,116;UBERON:0007026,1.89e-08,116;UBERON:0004119,3.10e-08,118;UBERON:0000925,3.10e-08,118;UBERON:0006595,3.10e-08,118;UBERON:0001962,1.69e-07,2;UBERON:0001961,1.69e-07,2;UBERON:0001744,1.69e-07,2;UBERON:0000485,6.64e-07,11 | |||
|phase1_expression=0,1.39590163055744,5.45999087267443,1.51232105653415,4.00716583957078,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,4.81759490241057,2.8711598205751,4.73838195774982,1.29282739611533,2.47030445293286,2.77233142735924,3.10422714917427,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0,1.7127581957859,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,1.32225283331772,0.213288250535234,0,0,0,0,0.190225626112559,9.96511029243474,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,14.3811105384675,13.6166971421057,9.95706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,1.81766864738753,1.42598951353889,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03590593552537,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0.87345025498471,0.809186078308924,0.909188012978695,0.523511883968059,7.51766845092399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:99294870..99294876,- | |||
}} |
Revision as of 21:54, 12 September 2013
Short description: | p@chr11:99294870..99294876, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:99294870..99294876, - |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.41e-13 | 6 |
gut absorptive cell | 7.41e-13 | 6 |
enterocyte | 7.41e-13 | 6 |
columnar/cuboidal epithelial cell | 5.45e-11 | 7 |
M cell of gut | 5.21e-10 | 3 |
intestinal epithelial cell | 1.70e-08 | 9 |
epithelial cell of alimentary canal | 1.70e-08 | 9 |
epithelial cell | 7.33e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.39e-24 | 31 |
mucosa | 5.48e-24 | 15 |
gastrointestinal system | 2.94e-19 | 47 |
intestinal mucosa | 1.45e-18 | 13 |
wall of intestine | 1.45e-18 | 13 |
gastrointestinal system mucosa | 1.45e-18 | 13 |
organ component layer | 3.15e-14 | 24 |
small intestine | 2.12e-13 | 4 |
ileal mucosa | 3.13e-10 | 3 |
ileum | 3.13e-10 | 3 |
mucosa of small intestine | 3.13e-10 | 3 |
wall of small intestine | 3.13e-10 | 3 |
epithelium of mucosa | 1.70e-08 | 9 |
gastrointestinal system epithelium | 1.70e-08 | 9 |
intestinal epithelium | 1.70e-08 | 9 |
digestive system | 1.89e-08 | 116 |
digestive tract | 1.89e-08 | 116 |
primitive gut | 1.89e-08 | 116 |
endoderm-derived structure | 3.10e-08 | 118 |
endoderm | 3.10e-08 | 118 |
presumptive endoderm | 3.10e-08 | 118 |
gut-associated lymphoid tissue | 1.69e-07 | 2 |
mucosa-associated lymphoid tissue | 1.69e-07 | 2 |
lymphoid tissue | 1.69e-07 | 2 |
simple columnar epithelium | 6.64e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.