FFCP PHASE1:Mm9::chr12:112615796..112615807,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=217866|HGNC=|UniProt=Q7TT50,B2RQQ7|association_with_transcript=121bp_to_ENSMUST00000041965,NM_183016,uc007pct.2_5end|description=CAGE_peak_3_at_Cdc42bpb_5end|id=chr12:112615796..112615807,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.55e-08!66;UBERON:0003914!5.77e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0009569,6.03e-09,66;UBERON:0005177,1.45e-07,79|phase1_expression=0.480446541314382,5.93258192986914,6.82498859084304,5.14189159221611,5.50985302940982,2.85394762250213,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0.42438965179803,1.10556277196391,0,0,1.59992422793407,1.37645568640302,5.7423196411502,2.15380998079537,1.50829862880122,0.380046838912748,1.51218077855958,1.10865255327652,0.635030673459631,0.61506478758457,0,0.866554859253824,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.550640256485045,1.56478268869608,0.436050312760893,1.31811709640683,1.1665793944457,0.55994568650145,4.31257693094915,0,0,0,2.05807548828758,2.57880095944881,0.515672092277442,0.809265843438391,1.05798195854407,0.633831403506179,2.03306719241479,0,0.449949858640699,1.97773272513395,0,0.599200221036809,2.30530983192933,0.725827286159344,0.675029691658453,0.210324961351382,1.42825492201902,0.662605622854841,0.367472397644862,0.766763768145891,0.919218786610021,0,1.53224805702225,1.0752457327937,0.791317726381163,0.457438218012048,2.6045668527838,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.711858403995515,0.372798891650601,0.530083353332288,2.72057616384428,4.92769630792852,0.860423876981386,5.439770669662,1.61910957491345,0.649776417447669,1.34408066129201,0.983110940922263,0.852151612890289,1.03914401841148,0.35333957451034,0.985903938436763,0,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.91347103775248,0,2.67195850316685,3.29622120855658,2.43572382649713,4.38169444786511,3.01445281105245,4.8211369925639,1.88499886994513,4.94389935468748,1.87979163995885,0,0.970601099684455,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,2.72280718857492,2.81002760729451,0.239630249011841,0,0,1.04853447583376,0,1.00523481690292,0.695297280769106,0.767146371990992,0,0.811206315338788,4.07357455401265,0.746441823660558,1.0108910337347,0.420883711772948,0.910843100738926,1.60931473103431,0.540186389416048,0.90422890701429,1.97305847538851,1.0249097622788,2.43624483855295,1.29351685369508,1.07783996466421,0.756424320671277,1.05570674498369,0.657587197282725,0,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0.284163499395593,1.44988040774851,2.11073453982987,1.80062061461015,2.3674473558521,1.18058539048442,0.925602677324269,1.86027155800326,1.60964040839772,3.03589890154641,2.46839774870221,1.97000956894914,2.02672023864639,2.04679982395465,1.3173006917463,2.81833479396781,0.210289948564127,1.3377599609307,2.31293148088659,2.64450566663544,0.426576501070468,0.928946687441754,1.54640953586512,1.81515172161008,0.667134131534611,1.14135375667535,0.949058123089023,1.64698954724011,1.50801125280162,1.79060824837036,1.36474860983384,1.79763881730844,1.29682829924817,1.59313018603494,0.189667900953082,1.37098215131675,2.25415471346161,1.83286195060783,1.55161989734101,2.66516115583211,1.83385957660346,4.13308414342886,1.72698600625512,2.96153193412321,2.96452627087149,1.16791574001266,0.589676985339609,1.34917267430912,1.21716072833102,1.92941727801933,1.52775511068852,2.01387296215567,2.2698931748505,1.92192989231657,8.62609239164127,3.72140947668503,3.43241440426017,2.02063102357689,1.97337154874103,3.37710464954357,1.66277871149944,1.13694847062291,1.79261474086228,1.52770577197669,1.87752198630802,1.67506257441816,2.61848004974615,5.85400943573396,3.15270288212382,3.5434350343804,3.50800491046472,1.47476983244164,2.93564469172023,2.16973587872267,0,0,0.983528546038072,0.551873492609465,0.963303539926752,2.69586879162067,0.491804836130026,0.757412781613119,0.94652465824877,1.95219372148319,1.50796378412959,3.10659437338318,2.89638276307112,2.26461224631066,3.23848561339915,3.21481443702443,3.55759000151871,0,1.98716119291576,1.42452482933804,2.11753047159649,1.64970122972535,1.32745138339963,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,1.22974059177571,2.58428293168221,1.81766864738753,1.78248689192361,0.316036757935816,0,1.03135543248187,1.02131881726136,0.540183282093931,0.646793418913773,0.214337035031592,0.709360934569094,1.24858172321449,0.658196082408484,1.8267896946876,3.28540391289194,4.87213762986786,0.441056796109924,0.8244312647074,0.807322133479528,0.904693873922338,0.954978752025092,1.14898629821543,3.20628920292836,1.8542530201051,0.170870880797853,0.619160603889667,0.740778109478847,0.376736914009382,0,0.228778173206523,0,0.419854356970974,0.138199973804424,0.954670618015114,1.10717597753397,1.62655573701479,1.18805874903981,1.67270636811575,0.218362563746178,2.42755823492677,2.31429676030941,2.87931536182433,1.42576470620972,1.86401793926078,0.56369293868419,0.897099276263873,1.15820943319968,0.388902376688095,1.29159823477731,0.675824501963113,2.8165737274981,2.99470085141085,5.24296722128554,1.93267296660805,1.44015003128933,0,0.405450430580328,0.410843828659309,0.25984164595559,0.716106782669926,0,0.120195449519969,0,0.302899349844443,0.304827226619999,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,1.81384306892169,3.99574716073316,7.62567781180543,4.7007692581942,1.9318959403219,1.68914227906064,2.93042598827624,0.643105137237198,0,1.6942555278512,0.920650473014354,1.71868654031819,0.515559547031063,0.685082519770642,1.5107877947794,0,1.35096360967266,0.906284817968409,0,0.830298780673413,1.59609949360412,1.19513524027894,1.21553358534147,0.419226325255965,1.47074806760011,1.33348036680969,1.23621034343337,1.60459604795908,0.758091635291392,1.2673964994512,2.07488975524684,1.77918864192777,1.60062881012173,1.55075766180156,0.952587382566147,1.0429589335037,1.54327376370964,0.412085900803307,1.47198920134397,1.37147700954166,1.59728225543404,1.1921809497366,1.16277133305863,1.31753132581463,1.09998990259179,1.28049581010941,1.31534855718921,1.35804113845862,0.561142271657738,1.18635018124174,1.18205378850676,1.22769312950907,0.619747364743864,1.54325288784913,0.499621155875892,1.63752125911786,1.28922632428979,1.3390183244819,1.10295709559758,0.695603506861264|short_description=p3@Cdc42bpb}} | ||
|EntrezGene=217866 | |||
|HGNC= | |||
|UniProt=Q7TT50,B2RQQ7 | |||
|association_with_transcript=121bp_to_ENSMUST00000041965,NM_183016,uc007pct.2_5end | |||
|description=CAGE_peak_3_at_Cdc42bpb_5end | |||
|id=chr12:112615796..112615807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.55e-08!66;UBERON:0003914!5.77e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,6.03e-09,66;UBERON:0005177,1.45e-07,79 | |||
|phase1_expression=0.480446541314382,5.93258192986914,6.82498859084304,5.14189159221611,5.50985302940982,2.85394762250213,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0.42438965179803,1.10556277196391,0,0,1.59992422793407,1.37645568640302,5.7423196411502,2.15380998079537,1.50829862880122,0.380046838912748,1.51218077855958,1.10865255327652,0.635030673459631,0.61506478758457,0,0.866554859253824,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.550640256485045,1.56478268869608,0.436050312760893,1.31811709640683,1.1665793944457,0.55994568650145,4.31257693094915,0,0,0,2.05807548828758,2.57880095944881,0.515672092277442,0.809265843438391,1.05798195854407,0.633831403506179,2.03306719241479,0,0.449949858640699,1.97773272513395,0,0.599200221036809,2.30530983192933,0.725827286159344,0.675029691658453,0.210324961351382,1.42825492201902,0.662605622854841,0.367472397644862,0.766763768145891,0.919218786610021,0,1.53224805702225,1.0752457327937,0.791317726381163,0.457438218012048,2.6045668527838,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.711858403995515,0.372798891650601,0.530083353332288,2.72057616384428,4.92769630792852,0.860423876981386,5.439770669662,1.61910957491345,0.649776417447669,1.34408066129201,0.983110940922263,0.852151612890289,1.03914401841148,0.35333957451034,0.985903938436763,0,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.91347103775248,0,2.67195850316685,3.29622120855658,2.43572382649713,4.38169444786511,3.01445281105245,4.8211369925639,1.88499886994513,4.94389935468748,1.87979163995885,0,0.970601099684455,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,2.72280718857492,2.81002760729451,0.239630249011841,0,0,1.04853447583376,0,1.00523481690292,0.695297280769106,0.767146371990992,0,0.811206315338788,4.07357455401265,0.746441823660558,1.0108910337347,0.420883711772948,0.910843100738926,1.60931473103431,0.540186389416048,0.90422890701429,1.97305847538851,1.0249097622788,2.43624483855295,1.29351685369508,1.07783996466421,0.756424320671277,1.05570674498369,0.657587197282725,0,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0.284163499395593,1.44988040774851,2.11073453982987,1.80062061461015,2.3674473558521,1.18058539048442,0.925602677324269,1.86027155800326,1.60964040839772,3.03589890154641,2.46839774870221,1.97000956894914,2.02672023864639,2.04679982395465,1.3173006917463,2.81833479396781,0.210289948564127,1.3377599609307,2.31293148088659,2.64450566663544,0.426576501070468,0.928946687441754,1.54640953586512,1.81515172161008,0.667134131534611,1.14135375667535,0.949058123089023,1.64698954724011,1.50801125280162,1.79060824837036,1.36474860983384,1.79763881730844,1.29682829924817,1.59313018603494,0.189667900953082,1.37098215131675,2.25415471346161,1.83286195060783,1.55161989734101,2.66516115583211,1.83385957660346,4.13308414342886,1.72698600625512,2.96153193412321,2.96452627087149,1.16791574001266,0.589676985339609,1.34917267430912,1.21716072833102,1.92941727801933,1.52775511068852,2.01387296215567,2.2698931748505,1.92192989231657,8.62609239164127,3.72140947668503,3.43241440426017,2.02063102357689,1.97337154874103,3.37710464954357,1.66277871149944,1.13694847062291,1.79261474086228,1.52770577197669,1.87752198630802,1.67506257441816,2.61848004974615,5.85400943573396,3.15270288212382,3.5434350343804,3.50800491046472,1.47476983244164,2.93564469172023,2.16973587872267,0,0,0.983528546038072,0.551873492609465,0.963303539926752,2.69586879162067,0.491804836130026,0.757412781613119,0.94652465824877,1.95219372148319,1.50796378412959,3.10659437338318,2.89638276307112,2.26461224631066,3.23848561339915,3.21481443702443,3.55759000151871,0,1.98716119291576,1.42452482933804,2.11753047159649,1.64970122972535,1.32745138339963,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,1.22974059177571,2.58428293168221,1.81766864738753,1.78248689192361,0.316036757935816,0,1.03135543248187,1.02131881726136,0.540183282093931,0.646793418913773,0.214337035031592,0.709360934569094,1.24858172321449,0.658196082408484,1.8267896946876,3.28540391289194,4.87213762986786,0.441056796109924,0.8244312647074,0.807322133479528,0.904693873922338,0.954978752025092,1.14898629821543,3.20628920292836,1.8542530201051,0.170870880797853,0.619160603889667,0.740778109478847,0.376736914009382,0,0.228778173206523,0,0.419854356970974,0.138199973804424,0.954670618015114,1.10717597753397,1.62655573701479,1.18805874903981,1.67270636811575,0.218362563746178,2.42755823492677,2.31429676030941,2.87931536182433,1.42576470620972,1.86401793926078,0.56369293868419,0.897099276263873,1.15820943319968,0.388902376688095,1.29159823477731,0.675824501963113,2.8165737274981,2.99470085141085,5.24296722128554,1.93267296660805,1.44015003128933,0,0.405450430580328,0.410843828659309,0.25984164595559,0.716106782669926,0,0.120195449519969,0,0.302899349844443,0.304827226619999,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,1.81384306892169,3.99574716073316,7.62567781180543,4.7007692581942,1.9318959403219,1.68914227906064,2.93042598827624,0.643105137237198,0,1.6942555278512,0.920650473014354,1.71868654031819,0.515559547031063,0.685082519770642,1.5107877947794,0,1.35096360967266,0.906284817968409,0,0.830298780673413,1.59609949360412,1.19513524027894,1.21553358534147,0.419226325255965,1.47074806760011,1.33348036680969,1.23621034343337,1.60459604795908,0.758091635291392,1.2673964994512,2.07488975524684,1.77918864192777,1.60062881012173,1.55075766180156,0.952587382566147,1.0429589335037,1.54327376370964,0.412085900803307,1.47198920134397,1.37147700954166,1.59728225543404,1.1921809497366,1.16277133305863,1.31753132581463,1.09998990259179,1.28049581010941,1.31534855718921,1.35804113845862,0.561142271657738,1.18635018124174,1.18205378850676,1.22769312950907,0.619747364743864,1.54325288784913,0.499621155875892,1.63752125911786,1.28922632428979,1.3390183244819,1.10295709559758,0.695603506861264 | |||
|short_description=p3@Cdc42bpb | |||
}} | |||
Revision as of 22:18, 12 September 2013
| Short description: | p3@Cdc42bpb |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Cdc42bpb_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 121bp_to_ENSMUST00000041965, NM_183016, uc007pct.2_5end |
| EntrezGene: | Cdc42bpb |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| subdivision of trunk | 6.03e-09 | 66 |
| trunk region element | 1.45e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
