FFCP PHASE1:Mm9::chr12:112655697..112655704,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74190|HGNC=|UniProt=Q6DIA2|association_with_transcript=41bp_to_uc007pcv.1_5end|description=CAGE_peak_7_at_1200009I06Rik_5end|id=chr12:112655697..112655704,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.56e-17,3;CL:0000351,1.56e-17,3;CL:0000239,3.64e-15,6;CL:0000677,3.64e-15,6;CL:0000584,3.64e-15,6;CL:0000075,4.92e-13,7;CL:0000066,2.98e-10,25;CL:0002563,3.47e-10,9;CL:0002251,3.47e-10,9;CL:0002076,3.54e-09,15;CL:0000682,2.58e-08,3;CL:0000223,7.55e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.75e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.56e-17,3;UBERON:0000307,1.56e-17,3;UBERON:0007010,1.56e-17,3;UBERON:0001987,2.97e-12,2;UBERON:0003124,2.97e-12,2;UBERON:0004340,2.97e-12,2;UBERON:0004923,7.62e-11,24;UBERON:0001242,1.04e-10,13;UBERON:0001262,1.04e-10,13;UBERON:0004786,1.04e-10,13;UBERON:0003350,3.47e-10,9;UBERON:0004808,3.47e-10,9;UBERON:0001277,3.47e-10,9;UBERON:0000344,2.89e-09,15;UBERON:0005631,1.84e-08,3;UBERON:0000478,1.84e-08,3;UBERON:0000158,1.84e-08,3;UBERON:0000485,2.29e-08,11|phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,1.81478526784098,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,1.72376986148711,0.950117097281869,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0,0,1.65209391491899,0.793351699990633,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0.864552199498777,0.597423819763102,0,0.114248512609729,0,0.814605311381257,0,0.350679099451593,0.569128834118316,1.47610147979602,0.784993639206874,0.740382983530803,0,0,0.196558995113203,0,0.405720242777006,0.482354319504834,1.2731292589071,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0,0,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,0,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.534196811001766,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,1.64270195644597,1.69465656691056,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,1.45740418314925,0.556275906031529,0,0.619160603889667,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0.25984164595559,0.358053391334963,0.39736270956253,0.360586348559907,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,1.10992976687032,1.70456327558004,2.85403847818933,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0.666740183404846,0,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p7@1200009I06Rik}} | ||
|EntrezGene=74190 | |||
|HGNC= | |||
|UniProt=Q6DIA2 | |||
|association_with_transcript=41bp_to_uc007pcv.1_5end | |||
|description=CAGE_peak_7_at_1200009I06Rik_5end | |||
|id=chr12:112655697..112655704,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.56e-17,3;CL:0000351,1.56e-17,3;CL:0000239,3.64e-15,6;CL:0000677,3.64e-15,6;CL:0000584,3.64e-15,6;CL:0000075,4.92e-13,7;CL:0000066,2.98e-10,25;CL:0002563,3.47e-10,9;CL:0002251,3.47e-10,9;CL:0002076,3.54e-09,15;CL:0000682,2.58e-08,3;CL:0000223,7.55e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.75e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.56e-17,3;UBERON:0000307,1.56e-17,3;UBERON:0007010,1.56e-17,3;UBERON:0001987,2.97e-12,2;UBERON:0003124,2.97e-12,2;UBERON:0004340,2.97e-12,2;UBERON:0004923,7.62e-11,24;UBERON:0001242,1.04e-10,13;UBERON:0001262,1.04e-10,13;UBERON:0004786,1.04e-10,13;UBERON:0003350,3.47e-10,9;UBERON:0004808,3.47e-10,9;UBERON:0001277,3.47e-10,9;UBERON:0000344,2.89e-09,15;UBERON:0005631,1.84e-08,3;UBERON:0000478,1.84e-08,3;UBERON:0000158,1.84e-08,3;UBERON:0000485,2.29e-08,11 | |||
|phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,1.81478526784098,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,1.72376986148711,0.950117097281869,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0,0,1.65209391491899,0.793351699990633,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0.864552199498777,0.597423819763102,0,0.114248512609729,0,0.814605311381257,0,0.350679099451593,0.569128834118316,1.47610147979602,0.784993639206874,0.740382983530803,0,0,0.196558995113203,0,0.405720242777006,0.482354319504834,1.2731292589071,0.575392274901621,0,0.274561413188081,0,0.744281895337007,0,0,0,0,0,0,0,0,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,0,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.534196811001766,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,1.64270195644597,1.69465656691056,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,1.45740418314925,0.556275906031529,0,0.619160603889667,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0.25984164595559,0.358053391334963,0.39736270956253,0.360586348559907,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,1.10992976687032,1.70456327558004,2.85403847818933,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.419226325255965,0.183843508450014,0.666740183404846,0,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p7@1200009I06Rik | |||
}} |
Revision as of 22:18, 12 September 2013
Short description: | p7@1200009I06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_1200009I06Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_uc007pcv.1_5end |
EntrezGene: | 1200009I06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.56e-17 | 3 |
trophoblast cell | 1.56e-17 | 3 |
brush border epithelial cell | 3.64e-15 | 6 |
gut absorptive cell | 3.64e-15 | 6 |
enterocyte | 3.64e-15 | 6 |
columnar/cuboidal epithelial cell | 4.92e-13 | 7 |
epithelial cell | 2.98e-10 | 25 |
intestinal epithelial cell | 3.47e-10 | 9 |
epithelial cell of alimentary canal | 3.47e-10 | 9 |
endo-epithelial cell | 3.54e-09 | 15 |
M cell of gut | 2.58e-08 | 3 |
endodermal cell | 7.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.56e-17 | 3 |
blastula | 1.56e-17 | 3 |
cleaving embryo | 1.56e-17 | 3 |
placenta | 2.97e-12 | 2 |
chorion | 2.97e-12 | 2 |
allantois | 2.97e-12 | 2 |
organ component layer | 7.62e-11 | 24 |
intestinal mucosa | 1.04e-10 | 13 |
wall of intestine | 1.04e-10 | 13 |
gastrointestinal system mucosa | 1.04e-10 | 13 |
epithelium of mucosa | 3.47e-10 | 9 |
gastrointestinal system epithelium | 3.47e-10 | 9 |
intestinal epithelium | 3.47e-10 | 9 |
mucosa | 2.89e-09 | 15 |
extraembryonic membrane | 1.84e-08 | 3 |
extraembryonic structure | 1.84e-08 | 3 |
membranous layer | 1.84e-08 | 3 |
simple columnar epithelium | 2.29e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.