FFCP PHASE1:Mm9::chr12:114567677..114567686,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114567677..114567686,-|id=chr12:114567677..114567686,-|ontology_enrichment_celltype=CL:0000553!4.12e-17!6;CL:0000556!4.12e-17!6;CL:0002027!7.42e-16!3;CL:0002006!7.42e-16!3;CL:0002024!7.42e-16!3;CL:0000050!1.19e-11!9;CL:0000414!1.19e-09!11;CL:0000839!2.91e-08!13;CL:0000763!8.00e-07!16|ontology_enrichment_celltype_v019_2=CL:0002027,7.89e-30,3;CL:0002006,7.89e-30,3;CL:0002024,7.89e-30,3;CL:0000553,1.58e-15,6;CL:0000556,1.58e-15,6;CL:0000050,1.01e-10,9;CL:0000839,9.70e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!2.18e-33!3;UBERON:0001962!1.80e-22!2;UBERON:0001961!1.80e-22!2;UBERON:0001744!1.80e-22!2;UBERON:0000029!1.20e-12!1;UBERON:0001097!1.20e-12!1;UBERON:0003968!1.20e-12!1;UBERON:0008785!1.20e-12!1;UBERON:0001467!1.20e-12!1;UBERON:0001421!1.20e-12!1;UBERON:0001044!4.30e-12!1;UBERON:0001736!4.30e-12!1;UBERON:0003293!4.30e-12!1;UBERON:0003294!4.30e-12!1;UBERON:0010047!4.30e-12!1;UBERON:0001829!4.30e-12!1;UBERON:0000167!4.30e-12!1;UBERON:0006298!4.30e-12!1;UBERON:0003199!5.53e-12!1;UBERON:0002193!3.33e-11!48;UBERON:0002405!1.18e-07!70;UBERON:0002371!8.00e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.06e-23,1;UBERON:0001097,3.06e-23,1;UBERON:0003968,3.06e-23,1;UBERON:0001467,3.06e-23,1;UBERON:0002465,1.13e-08,3;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,2.02475267389826,0,0,0.137114433605739,0,0,0,0,0.95995453676044,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8753911131812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:114567677..114567686,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114567677..114567686,- | |||
|id=chr12:114567677..114567686,- | |||
|ontology_enrichment_celltype=CL:0000553!4.12e-17!6;CL:0000556!4.12e-17!6;CL:0002027!7.42e-16!3;CL:0002006!7.42e-16!3;CL:0002024!7.42e-16!3;CL:0000050!1.19e-11!9;CL:0000414!1.19e-09!11;CL:0000839!2.91e-08!13;CL:0000763!8.00e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,7.89e-30,3;CL:0002006,7.89e-30,3;CL:0002024,7.89e-30,3;CL:0000553,1.58e-15,6;CL:0000556,1.58e-15,6;CL:0000050,1.01e-10,9;CL:0000839,9.70e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.18e-33!3;UBERON:0001962!1.80e-22!2;UBERON:0001961!1.80e-22!2;UBERON:0001744!1.80e-22!2;UBERON:0000029!1.20e-12!1;UBERON:0001097!1.20e-12!1;UBERON:0003968!1.20e-12!1;UBERON:0008785!1.20e-12!1;UBERON:0001467!1.20e-12!1;UBERON:0001421!1.20e-12!1;UBERON:0001044!4.30e-12!1;UBERON:0001736!4.30e-12!1;UBERON:0003293!4.30e-12!1;UBERON:0003294!4.30e-12!1;UBERON:0010047!4.30e-12!1;UBERON:0001829!4.30e-12!1;UBERON:0000167!4.30e-12!1;UBERON:0006298!4.30e-12!1;UBERON:0003199!5.53e-12!1;UBERON:0002193!3.33e-11!48;UBERON:0002405!1.18e-07!70;UBERON:0002371!8.00e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.06e-23,1;UBERON:0001097,3.06e-23,1;UBERON:0003968,3.06e-23,1;UBERON:0001467,3.06e-23,1;UBERON:0002465,1.13e-08,3;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,2.02475267389826,0,0,0.137114433605739,0,0,0,0,0.95995453676044,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8753911131812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:114567677..114567686,- | |||
}} |
Revision as of 22:25, 12 September 2013
Short description: | p@chr12:114567677..114567686, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114567677..114567686, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 7.89e-30 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.89e-30 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.89e-30 | 3 |
megakaryocyte progenitor cell | 1.58e-15 | 6 |
megakaryocyte | 1.58e-15 | 6 |
megakaryocyte-erythroid progenitor cell | 1.01e-10 | 9 |
myeloid lineage restricted progenitor cell | 9.70e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.06e-23 | 1 |
axillary lymph node | 3.06e-23 | 1 |
peripheral lymph node | 3.06e-23 | 1 |
shoulder | 3.06e-23 | 1 |
lymphoid system | 1.13e-08 | 3 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.