FFCP PHASE1:Mm9::chr12:119069354..119069356,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:119069354..119069356,+|id=chr12:119069354..119069356,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,5.78e-08,6;CL:0000556,5.78e-08,6;CL:0002027,9.79e-08,3;CL:0002006,9.79e-08,3;CL:0002024,9.79e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.84e-10,22;UBERON:0007499,9.84e-10,22;UBERON:0006925,9.84e-10,22;UBERON:0009497,9.84e-10,22;UBERON:0000015,9.84e-10,22;UBERON:0002423,9.84e-10,22;UBERON:0006235,9.84e-10,22;UBERON:0008835,9.84e-10,22;UBERON:0003894,9.84e-10,22;UBERON:0004161,9.84e-10,22;UBERON:0008836,9.84e-10,22;UBERON:0009854,2.81e-09,23;UBERON:0009856,2.81e-09,23;UBERON:0002365,1.78e-08,25;UBERON:0002330,1.78e-08,25;UBERON:0005172,4.25e-08,49;UBERON:0005173,4.25e-08,49;UBERON:0002417,4.25e-08,49;UBERON:0000916,4.25e-08,49;UBERON:0009569,6.56e-07,66;UBERON:0003914,9.07e-07,47|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.333109761815663,6.47920855647443,3.49780939064073,0.473193248037357,1.50825876966313,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0.461230994512117,0,0.23517741427141,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0.130120442962704,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0,0.324275238183423,0.877199924551994,0.658650345873152,1.47627060636409,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,1.16791574001266,1.17935397067922,1.12431056192427,3.24576194221605,1.4470629585145,3.05551022137704,3.45235364940973,0.648540907100142,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0.630540576424764,0.664394068946325,0.318909537314974,1.63863314715738,0.863424909329478,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0,0,0,0,0,0,0,0,2.05045056957423,0,0.555583582109135,2.0720530270516,0.956859594047176,0.915112692826091,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.628839487883947,0.735374033800057,1.77797382241292,0,0.64183841918363,0,1.01391719956096,0.565879024158229,0.468207537349412,0.768301828858431,0.34461281373368,0.476293691283074,0.463537303779422,0.77163688185482,0,0,2.40008476669791,0.532427418478012,0,0.872078499793971,0.376437521661322,0.338458431566706,2.0122077016005,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0,0|short_description=p@chr12:119069354..119069356,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:119069354..119069356,+ | |||
|id=chr12:119069354..119069356,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.78e-08,6;CL:0000556,5.78e-08,6;CL:0002027,9.79e-08,3;CL:0002006,9.79e-08,3;CL:0002024,9.79e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.84e-10,22;UBERON:0007499,9.84e-10,22;UBERON:0006925,9.84e-10,22;UBERON:0009497,9.84e-10,22;UBERON:0000015,9.84e-10,22;UBERON:0002423,9.84e-10,22;UBERON:0006235,9.84e-10,22;UBERON:0008835,9.84e-10,22;UBERON:0003894,9.84e-10,22;UBERON:0004161,9.84e-10,22;UBERON:0008836,9.84e-10,22;UBERON:0009854,2.81e-09,23;UBERON:0009856,2.81e-09,23;UBERON:0002365,1.78e-08,25;UBERON:0002330,1.78e-08,25;UBERON:0005172,4.25e-08,49;UBERON:0005173,4.25e-08,49;UBERON:0002417,4.25e-08,49;UBERON:0000916,4.25e-08,49;UBERON:0009569,6.56e-07,66;UBERON:0003914,9.07e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.333109761815663,6.47920855647443,3.49780939064073,0.473193248037357,1.50825876966313,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0.461230994512117,0,0.23517741427141,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0.130120442962704,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0,0.324275238183423,0.877199924551994,0.658650345873152,1.47627060636409,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,1.16791574001266,1.17935397067922,1.12431056192427,3.24576194221605,1.4470629585145,3.05551022137704,3.45235364940973,0.648540907100142,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0.630540576424764,0.664394068946325,0.318909537314974,1.63863314715738,0.863424909329478,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0,0,0,0,0,0,0,0,2.05045056957423,0,0.555583582109135,2.0720530270516,0.956859594047176,0.915112692826091,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.729320151204882,0.628839487883947,0.735374033800057,1.77797382241292,0,0.64183841918363,0,1.01391719956096,0.565879024158229,0.468207537349412,0.768301828858431,0.34461281373368,0.476293691283074,0.463537303779422,0.77163688185482,0,0,2.40008476669791,0.532427418478012,0,0.872078499793971,0.376437521661322,0.338458431566706,2.0122077016005,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:119069354..119069356,+ | |||
}} |
Revision as of 22:30, 12 September 2013
Short description: | p@chr12:119069354..119069356, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:119069354..119069356, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.78e-08 | 6 |
megakaryocyte | 5.78e-08 | 6 |
CD9-positive, CD41-positive megakaryocyte cell | 9.79e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 9.79e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 9.79e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 9.84e-10 | 22 |
epithelial sac | 9.84e-10 | 22 |
digestive gland | 9.84e-10 | 22 |
epithelium of foregut-midgut junction | 9.84e-10 | 22 |
anatomical boundary | 9.84e-10 | 22 |
hepatobiliary system | 9.84e-10 | 22 |
foregut-midgut junction | 9.84e-10 | 22 |
hepatic diverticulum | 9.84e-10 | 22 |
liver primordium | 9.84e-10 | 22 |
septum transversum | 9.84e-10 | 22 |
liver bud | 9.84e-10 | 22 |
digestive tract diverticulum | 2.81e-09 | 23 |
sac | 2.81e-09 | 23 |
exocrine gland | 1.78e-08 | 25 |
exocrine system | 1.78e-08 | 25 |
abdomen element | 4.25e-08 | 49 |
abdominal segment element | 4.25e-08 | 49 |
abdominal segment of trunk | 4.25e-08 | 49 |
abdomen | 4.25e-08 | 49 |
subdivision of trunk | 6.56e-07 | 66 |
epithelial tube | 9.07e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.