FFCP PHASE1:Mm9::chr12:37968512..37968526,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319660|HGNC=|MCL_coexpression_id=265|UniProt=Q8BS35|association_with_transcript=65bp_to_ENSMUST00000159998_5end|description=CAGE_peak_4_at_Agmo_5end|id=chr12:37968512..37968526,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-09,25;CL:0000239,4.36e-08,6;CL:0000677,4.36e-08,6;CL:0000584,4.36e-08,6;CL:0000223,5.68e-08,20;CL:0000075,8.60e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!5.00e-14!25;UBERON:0002330!5.00e-14!25;UBERON:0002107!5.14e-13!22;UBERON:0007499!5.14e-13!22;UBERON:0006925!5.14e-13!22;UBERON:0009497!5.14e-13!22;UBERON:0000015!5.14e-13!22;UBERON:0002423!5.14e-13!22;UBERON:0006235!5.14e-13!22;UBERON:0008835!5.14e-13!22;UBERON:0003894!5.14e-13!22;UBERON:0004161!5.14e-13!22;UBERON:0008836!5.14e-13!22;UBERON:0009854!6.03e-12!23;UBERON:0009856!6.03e-12!23;UBERON:0001007!1.73e-09!128;UBERON:0001555!1.73e-09!128;UBERON:0007026!1.73e-09!128;UBERON:0004119!1.91e-09!130;UBERON:0000925!1.91e-09!130;UBERON:0006595!1.91e-09!130;UBERON:0000344!3.31e-09!15;UBERON:0004921!1.03e-08!126;UBERON:0004185!1.03e-08!126;UBERON:0000160!2.00e-08!43;UBERON:0001242!4.05e-08!13;UBERON:0000060!4.05e-08!13;UBERON:0001262!4.05e-08!13;UBERON:0004786!4.05e-08!13;UBERON:0007023!3.37e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.79e-18,25;UBERON:0002330,1.79e-18,25;UBERON:0002107,9.87e-18,22;UBERON:0007499,9.87e-18,22;UBERON:0006925,9.87e-18,22;UBERON:0009497,9.87e-18,22;UBERON:0000015,9.87e-18,22;UBERON:0002423,9.87e-18,22;UBERON:0006235,9.87e-18,22;UBERON:0008835,9.87e-18,22;UBERON:0003894,9.87e-18,22;UBERON:0004161,9.87e-18,22;UBERON:0008836,9.87e-18,22;UBERON:0000160,7.41e-17,31;UBERON:0009854,1.02e-16,23;UBERON:0009856,1.02e-16,23;UBERON:0001007,2.69e-15,116;UBERON:0001555,2.69e-15,116;UBERON:0007026,2.69e-15,116;UBERON:0004119,8.14e-15,118;UBERON:0000925,8.14e-15,118;UBERON:0006595,8.14e-15,118;UBERON:0004921,7.44e-14,114;UBERON:0000344,4.04e-13,15;UBERON:0001242,4.50e-11,13;UBERON:0001262,4.50e-11,13;UBERON:0004786,4.50e-11,13;UBERON:0003929,6.88e-11,55;UBERON:0005409,8.14e-11,47;UBERON:0011216,4.97e-08,194;UBERON:0000490,6.91e-08,66;UBERON:0005911,3.00e-07,69;UBERON:0004923,6.23e-07,24;UBERON:0005256,8.87e-07,45|phase1_expression=0,3.14077866875425,3.63999391511629,8.46899791659124,6.51164448930251,1.84667199103079,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,2.87986361028132,2.98232065387321,4.01962374880514,4.30761996159075,3.66301095566011,5.89072600314759,5.79669298447841,1.33038306393183,0,0,0,1.1554064790051,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0,0,0.869593466105033,6.0229671388697,5.439770669662,9.71465744948071,20.1430689408777,14.7848872742121,5.61777680527007,0,0,0,0,3.84979432242953,0,0,0,0,0,11.1900202124679,0.517875767294343,0.29688427812965,0,0,0.230615497256059,0,0,0.628332956648377,0,6.79616977523585,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,9.19645398750929,0,0,0,1.04853447583376,0.457500602818626,0,1.04294592115366,1.02286182932132,0.62336413367868,0.486723789203273,0.101839363850316,0.995255764880744,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.492502392237286,0.486412857275134,0.146199987425332,0.439100230582101,0.805238512562231,0.630869845692382,0.205809224758569,32.3810407324122,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0.760902504450237,10.4396393539793,1.31759163779209,1.75934646160189,2.38747766449381,2.33956904542944,5.39291645192533,8.42938394511308,8.76221602319216,0,0,0,0,0,0,0.0632365371242573,0,0.627994911365499,0.493588655687202,20.1587786419261,0.166845105716094,0.982794975566015,1.12431056192427,1.01430060694251,0.72353147925725,1.01850340712568,1.15078454980324,3.08056930872567,4.11842119782122,7.18841032636773,8.93138274404408,11.5453939052387,8.5876818502018,7.17589654087649,13.5084185981743,0.369506380333209,0,0,0,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0.159454768657487,0.983179888294428,0.518054945597687,0.867894351489069,3.01582567878545,0,0.491764273019036,1.37968373152366,0.80275294993896,1.05490517932983,0,0.757412781613119,0.631016438832513,0.780877488593277,0.861693590931196,1.19484398976276,0.891194696329576,0.849229592366497,1.61924280669958,1.46127928955656,1.18586333383957,0.321321316421807,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,1.42598951353889,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0.220528398054962,1.31909002353184,0.161464426695906,0.180938774784468,0,0,9.91034844541493,2.03967832211561,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.655087691238533,0.404593039154462,1.07449492442937,1.04702376793612,0,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0,1.58711268530648,0,0,0,0.579568782096571,0,0.549454872801795,0,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0.685082519770642,2.2661816921691,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.17230640686684,0,0.231768651889711,0.77163688185482,0.412085900803307,0.588795680537589,0,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.407412341537585,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843|short_description=p4@Agmo}} | ||
|EntrezGene=319660 | |||
|HGNC= | |||
|MCL_coexpression_id=265 | |||
|UniProt=Q8BS35 | |||
|association_with_transcript=65bp_to_ENSMUST00000159998_5end | |||
|description=CAGE_peak_4_at_Agmo_5end | |||
|id=chr12:37968512..37968526,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-09,25;CL:0000239,4.36e-08,6;CL:0000677,4.36e-08,6;CL:0000584,4.36e-08,6;CL:0000223,5.68e-08,20;CL:0000075,8.60e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!5.00e-14!25;UBERON:0002330!5.00e-14!25;UBERON:0002107!5.14e-13!22;UBERON:0007499!5.14e-13!22;UBERON:0006925!5.14e-13!22;UBERON:0009497!5.14e-13!22;UBERON:0000015!5.14e-13!22;UBERON:0002423!5.14e-13!22;UBERON:0006235!5.14e-13!22;UBERON:0008835!5.14e-13!22;UBERON:0003894!5.14e-13!22;UBERON:0004161!5.14e-13!22;UBERON:0008836!5.14e-13!22;UBERON:0009854!6.03e-12!23;UBERON:0009856!6.03e-12!23;UBERON:0001007!1.73e-09!128;UBERON:0001555!1.73e-09!128;UBERON:0007026!1.73e-09!128;UBERON:0004119!1.91e-09!130;UBERON:0000925!1.91e-09!130;UBERON:0006595!1.91e-09!130;UBERON:0000344!3.31e-09!15;UBERON:0004921!1.03e-08!126;UBERON:0004185!1.03e-08!126;UBERON:0000160!2.00e-08!43;UBERON:0001242!4.05e-08!13;UBERON:0000060!4.05e-08!13;UBERON:0001262!4.05e-08!13;UBERON:0004786!4.05e-08!13;UBERON:0007023!3.37e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.79e-18,25;UBERON:0002330,1.79e-18,25;UBERON:0002107,9.87e-18,22;UBERON:0007499,9.87e-18,22;UBERON:0006925,9.87e-18,22;UBERON:0009497,9.87e-18,22;UBERON:0000015,9.87e-18,22;UBERON:0002423,9.87e-18,22;UBERON:0006235,9.87e-18,22;UBERON:0008835,9.87e-18,22;UBERON:0003894,9.87e-18,22;UBERON:0004161,9.87e-18,22;UBERON:0008836,9.87e-18,22;UBERON:0000160,7.41e-17,31;UBERON:0009854,1.02e-16,23;UBERON:0009856,1.02e-16,23;UBERON:0001007,2.69e-15,116;UBERON:0001555,2.69e-15,116;UBERON:0007026,2.69e-15,116;UBERON:0004119,8.14e-15,118;UBERON:0000925,8.14e-15,118;UBERON:0006595,8.14e-15,118;UBERON:0004921,7.44e-14,114;UBERON:0000344,4.04e-13,15;UBERON:0001242,4.50e-11,13;UBERON:0001262,4.50e-11,13;UBERON:0004786,4.50e-11,13;UBERON:0003929,6.88e-11,55;UBERON:0005409,8.14e-11,47;UBERON:0011216,4.97e-08,194;UBERON:0000490,6.91e-08,66;UBERON:0005911,3.00e-07,69;UBERON:0004923,6.23e-07,24;UBERON:0005256,8.87e-07,45 | |||
|phase1_expression=0,3.14077866875425,3.63999391511629,8.46899791659124,6.51164448930251,1.84667199103079,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,2.87986361028132,2.98232065387321,4.01962374880514,4.30761996159075,3.66301095566011,5.89072600314759,5.79669298447841,1.33038306393183,0,0,0,1.1554064790051,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0,0,0.869593466105033,6.0229671388697,5.439770669662,9.71465744948071,20.1430689408777,14.7848872742121,5.61777680527007,0,0,0,0,3.84979432242953,0,0,0,0,0,11.1900202124679,0.517875767294343,0.29688427812965,0,0,0.230615497256059,0,0,0.628332956648377,0,6.79616977523585,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,9.19645398750929,0,0,0,1.04853447583376,0.457500602818626,0,1.04294592115366,1.02286182932132,0.62336413367868,0.486723789203273,0.101839363850316,0.995255764880744,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.492502392237286,0.486412857275134,0.146199987425332,0.439100230582101,0.805238512562231,0.630869845692382,0.205809224758569,32.3810407324122,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0.760902504450237,10.4396393539793,1.31759163779209,1.75934646160189,2.38747766449381,2.33956904542944,5.39291645192533,8.42938394511308,8.76221602319216,0,0,0,0,0,0,0.0632365371242573,0,0.627994911365499,0.493588655687202,20.1587786419261,0.166845105716094,0.982794975566015,1.12431056192427,1.01430060694251,0.72353147925725,1.01850340712568,1.15078454980324,3.08056930872567,4.11842119782122,7.18841032636773,8.93138274404408,11.5453939052387,8.5876818502018,7.17589654087649,13.5084185981743,0.369506380333209,0,0,0,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0.159454768657487,0.983179888294428,0.518054945597687,0.867894351489069,3.01582567878545,0,0.491764273019036,1.37968373152366,0.80275294993896,1.05490517932983,0,0.757412781613119,0.631016438832513,0.780877488593277,0.861693590931196,1.19484398976276,0.891194696329576,0.849229592366497,1.61924280669958,1.46127928955656,1.18586333383957,0.321321316421807,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,1.42598951353889,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0.220528398054962,1.31909002353184,0.161464426695906,0.180938774784468,0,0,9.91034844541493,2.03967832211561,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.655087691238533,0.404593039154462,1.07449492442937,1.04702376793612,0,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0,1.58711268530648,0,0,0,0.579568782096571,0,0.549454872801795,0,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0.685082519770642,2.2661816921691,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.17230640686684,0,0.231768651889711,0.77163688185482,0.412085900803307,0.588795680537589,0,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.407412341537585,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843 | |||
|short_description=p4@Agmo | |||
}} |
Revision as of 22:47, 12 September 2013
Short description: | p4@Agmo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Agmo_5end |
Coexpression cluster: | MCL_coexpression_mm9:265 |
Association with transcript: | 65bp_to_ENSMUST00000159998_5end |
EntrezGene: | Agmo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.33e-09 | 25 |
brush border epithelial cell | 4.36e-08 | 6 |
gut absorptive cell | 4.36e-08 | 6 |
enterocyte | 4.36e-08 | 6 |
endodermal cell | 5.68e-08 | 20 |
columnar/cuboidal epithelial cell | 8.60e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.79e-18 | 25 |
exocrine system | 1.79e-18 | 25 |
liver | 9.87e-18 | 22 |
epithelial sac | 9.87e-18 | 22 |
digestive gland | 9.87e-18 | 22 |
epithelium of foregut-midgut junction | 9.87e-18 | 22 |
anatomical boundary | 9.87e-18 | 22 |
hepatobiliary system | 9.87e-18 | 22 |
foregut-midgut junction | 9.87e-18 | 22 |
hepatic diverticulum | 9.87e-18 | 22 |
liver primordium | 9.87e-18 | 22 |
septum transversum | 9.87e-18 | 22 |
liver bud | 9.87e-18 | 22 |
intestine | 7.41e-17 | 31 |
digestive tract diverticulum | 1.02e-16 | 23 |
sac | 1.02e-16 | 23 |
digestive system | 2.69e-15 | 116 |
digestive tract | 2.69e-15 | 116 |
primitive gut | 2.69e-15 | 116 |
endoderm-derived structure | 8.14e-15 | 118 |
endoderm | 8.14e-15 | 118 |
presumptive endoderm | 8.14e-15 | 118 |
subdivision of digestive tract | 7.44e-14 | 114 |
mucosa | 4.04e-13 | 15 |
intestinal mucosa | 4.50e-11 | 13 |
wall of intestine | 4.50e-11 | 13 |
gastrointestinal system mucosa | 4.50e-11 | 13 |
gut epithelium | 6.88e-11 | 55 |
gastrointestinal system | 8.14e-11 | 47 |
organ system subdivision | 4.97e-08 | 194 |
unilaminar epithelium | 6.91e-08 | 66 |
endo-epithelium | 3.00e-07 | 69 |
organ component layer | 6.23e-07 | 24 |
trunk mesenchyme | 8.87e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.