FFCP PHASE1:Mm9::chr12:38606757..38606766,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217480|HGNC=|MCL_coexpression_id=2037|UniProt=Q3TSN3,Q6NS52|association_with_transcript=0bp_to_ENSMUST00000084204,uc007nki.1,uc007nkj.1_5end|description=CAGE_peak_6_at_Dgkb_5end|id=chr12:38606757..38606766,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.62e-08!71;UBERON:0003075!5.62e-08!71;UBERON:0007284!5.62e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-08,54;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0001017,5.82e-07,73|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.662605622854841,0,0,0,4.40463523997555,0.638436690425939,1.22885226604995,0.263772575460388,0.182975287204819,0,0.837548997004143,6.19038871034848,5.50073691996516,1.76777151284201,1.85083185038834,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0,1.21786191324856,0.230615497256059,0.452167921657868,1.05829836422134,0.125666591329675,0.741584903203122,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,5.39246301857362,5.03250663100489,0.628271760564322,2.9550134432687,1.79000820131231,2.49345653471472,4.70499662896497,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.476255494059295,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,3.15434922846191,0,0,0.264450566663544,0.213288250535234,1.16118335930219,1.41754207454303,1.21010114774006,2.2237804384487,2.09248188723815,0,1.97638745668813,1.00534083520108,0.397912944082302,1.16978452271472,1.79763881730844,1.08069024937347,0.597423819763102,0,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.280543279561274,0.69560190836683,0.147610147979602,1.09899109488962,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.509235257325564,1.17345124144251,0.837531287209079,0.952174563544055,1.56106918286239,3.94087860265477,0.8858587585951,0.797273843287435,0.491589944147214,0.172684981865896,0,0,0,0,0,4.0137647496948,2.57865710502847,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,0,0,19.2792789853084,0.709700426041343,0.35613120733451,0.81443479676788,0.659880491890142,0,0,0,0,0,0.614870295887855,0.775284879504663,1.09060118843252,0,0.948110273807448,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0.658196082408484,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0.582961673259701,2.41052892613663,0,0,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.330613822901344,0,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,0,0.564751842617067,0.920650473014354,0,1.3748254587495,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,0,0,0.486213434136588,0.419226325255965,0.367687016900028,0.666740183404846,1.03017528619447,1.28367683836726,0,0.25347929989024,0,0.468207537349412,0.832326981263301,0.804096565378586,0.952587382566147,0.463537303779422,0.77163688185482,0,0.294397840268795,1.37147700954166,0.354951612318675,0.715308569841963,0.726732083161643,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,1.08643291076689,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.77468420592983,0.771626443924566,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0.695603506861264|short_description=p6@Dgkb}} | ||
|EntrezGene=217480 | |||
|HGNC= | |||
|MCL_coexpression_id=2037 | |||
|UniProt=Q3TSN3,Q6NS52 | |||
|association_with_transcript=0bp_to_ENSMUST00000084204,uc007nki.1,uc007nkj.1_5end | |||
|description=CAGE_peak_6_at_Dgkb_5end | |||
|id=chr12:38606757..38606766,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.62e-08!71;UBERON:0003075!5.62e-08!71;UBERON:0007284!5.62e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-08,54;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0001017,5.82e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.662605622854841,0,0,0,4.40463523997555,0.638436690425939,1.22885226604995,0.263772575460388,0.182975287204819,0,0.837548997004143,6.19038871034848,5.50073691996516,1.76777151284201,1.85083185038834,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0,1.21786191324856,0.230615497256059,0.452167921657868,1.05829836422134,0.125666591329675,0.741584903203122,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,5.39246301857362,5.03250663100489,0.628271760564322,2.9550134432687,1.79000820131231,2.49345653471472,4.70499662896497,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.476255494059295,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,3.15434922846191,0,0,0.264450566663544,0.213288250535234,1.16118335930219,1.41754207454303,1.21010114774006,2.2237804384487,2.09248188723815,0,1.97638745668813,1.00534083520108,0.397912944082302,1.16978452271472,1.79763881730844,1.08069024937347,0.597423819763102,0,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.280543279561274,0.69560190836683,0.147610147979602,1.09899109488962,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.509235257325564,1.17345124144251,0.837531287209079,0.952174563544055,1.56106918286239,3.94087860265477,0.8858587585951,0.797273843287435,0.491589944147214,0.172684981865896,0,0,0,0,0,4.0137647496948,2.57865710502847,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,0,0,19.2792789853084,0.709700426041343,0.35613120733451,0.81443479676788,0.659880491890142,0,0,0,0,0,0.614870295887855,0.775284879504663,1.09060118843252,0,0.948110273807448,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0.658196082408484,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0.582961673259701,2.41052892613663,0,0,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.330613822901344,0,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,0,0.564751842617067,0.920650473014354,0,1.3748254587495,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,0,0,0.486213434136588,0.419226325255965,0.367687016900028,0.666740183404846,1.03017528619447,1.28367683836726,0,0.25347929989024,0,0.468207537349412,0.832326981263301,0.804096565378586,0.952587382566147,0.463537303779422,0.77163688185482,0,0.294397840268795,1.37147700954166,0.354951612318675,0.715308569841963,0.726732083161643,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,1.08643291076689,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.77468420592983,0.771626443924566,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p6@Dgkb | |||
}} |
Revision as of 22:47, 12 September 2013
Short description: | p6@Dgkb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dgkb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2037 |
Association with transcript: | 0bp_to_ENSMUST00000084204, uc007nki.1, uc007nkj.1_5end |
EntrezGene: | Dgkb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.28e-08 | 54 |
neural tube | 1.09e-07 | 52 |
neural rod | 1.09e-07 | 52 |
future spinal cord | 1.09e-07 | 52 |
neural keel | 1.09e-07 | 52 |
central nervous system | 5.82e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.