FFCP PHASE1:Mm9::chr12:73185700..73185732,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67217|HGNC=|MCL_coexpression_id=179|UniProt=|association_with_transcript=272bp_to_ENSMUST00000138029_5end|description=CAGE_peak_4_at_2810055F11Rik_5end|id=chr12:73185700..73185732,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,5.06e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.23e-15!22;UBERON:0007499!3.23e-15!22;UBERON:0006925!3.23e-15!22;UBERON:0009497!3.23e-15!22;UBERON:0000015!3.23e-15!22;UBERON:0002423!3.23e-15!22;UBERON:0006235!3.23e-15!22;UBERON:0008835!3.23e-15!22;UBERON:0003894!3.23e-15!22;UBERON:0004161!3.23e-15!22;UBERON:0008836!3.23e-15!22;UBERON:0009854!4.03e-14!23;UBERON:0009856!4.03e-14!23;UBERON:0005172!4.95e-13!49;UBERON:0005173!4.95e-13!49;UBERON:0002417!4.95e-13!49;UBERON:0000916!4.95e-13!49;UBERON:0002365!3.26e-12!25;UBERON:0002330!3.26e-12!25;UBERON:0003914!2.82e-10!47;UBERON:0009569!8.51e-09!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.67e-29,22;UBERON:0007499,3.67e-29,22;UBERON:0006925,3.67e-29,22;UBERON:0009497,3.67e-29,22;UBERON:0000015,3.67e-29,22;UBERON:0002423,3.67e-29,22;UBERON:0006235,3.67e-29,22;UBERON:0008835,3.67e-29,22;UBERON:0003894,3.67e-29,22;UBERON:0004161,3.67e-29,22;UBERON:0008836,3.67e-29,22;UBERON:0009854,1.09e-27,23;UBERON:0009856,1.09e-27,23;UBERON:0002365,4.22e-25,25;UBERON:0002330,4.22e-25,25;UBERON:0005172,1.88e-23,49;UBERON:0005173,1.88e-23,49;UBERON:0002417,1.88e-23,49;UBERON:0000916,1.88e-23,49;UBERON:0003104,1.39e-17,61;UBERON:0009142,1.39e-17,61;UBERON:0009569,9.02e-16,66;UBERON:0003914,8.67e-13,47;UBERON:0005177,3.81e-12,79;UBERON:0005256,6.43e-12,45;UBERON:0002100,6.56e-10,90;UBERON:0003929,5.86e-09,55;UBERON:0002368,7.37e-08,60;UBERON:0002113,1.99e-07,14;UBERON:0003918,1.99e-07,14;UBERON:0011143,1.99e-07,14;UBERON:0005095,1.99e-07,14;UBERON:0007687,1.99e-07,14;UBERON:0002530,6.19e-07,65;UBERON:0000490,9.09e-07,66|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,3.44169550792555,4.0798280022465,7.01614149129162,8.4470934268197,8.06448396775204,2.80888840263504,0,0,0,0,0,0,0,0,0,0,6.96521666286266,0,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0.879666139307728,0,5.06097749219691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0,0.462801338662135,0.697601834251224,0,0.233530684734339,0.822799249567402,0.164167464079095,0.0810688095458557,0,0.439100230582101,0.268412837520744,0,0,0,0,0.426576501070468,0,0.257734922644187,1.00841762311671,1.33426826306922,1.52180500890047,0,1.31759163779209,1.00534083520108,2.18852119245266,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,2.24016460629846,3.68509725618489,3.7873342740772,5.75452487830741,8.85660887877613,14.2868842335651,14.3140710149289,9.48648406678877,0.333690211432188,0.982794975566015,0.674586337154561,1.01430060694251,1.20588579876208,1.78238096246994,5.4662266115654,2.59416362840057,3.29473695825698,1.43768206527355,3.72140947668503,3.12037673114561,4.04126204715379,3.58794827043824,12.5435315554475,0,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0.252470927204373,0,0,0,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.888986911206461,0.206035057238894,1.28367683836726,1.26348605881899,0.25347929989024,0.943131706930381,0.468207537349412,0.512201219238954,0.976402972245426,0.476293691283074,0.463537303779422,1.15745532278223,0.824171801606613,1.17759136107518,1.02860775715625,0.887379030796687,0.238436189947321,0.872078499793971,0.376437521661322,0.507687647350059,0.914639864363863,1.31534855718921,0.543216455383447,1.12228454331548,0.830445126869219,0.492522411877817,0,0.464810523557898,0.964533054905707,0,0.701794825336225,1.28922632428979,0.382576664137687,0.220591419119515,0.927471342481686|short_description=p4@2810055F11Rik}} | ||
|EntrezGene=67217 | |||
|HGNC= | |||
|MCL_coexpression_id=179 | |||
|UniProt= | |||
|association_with_transcript=272bp_to_ENSMUST00000138029_5end | |||
|description=CAGE_peak_4_at_2810055F11Rik_5end | |||
|id=chr12:73185700..73185732,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.06e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.23e-15!22;UBERON:0007499!3.23e-15!22;UBERON:0006925!3.23e-15!22;UBERON:0009497!3.23e-15!22;UBERON:0000015!3.23e-15!22;UBERON:0002423!3.23e-15!22;UBERON:0006235!3.23e-15!22;UBERON:0008835!3.23e-15!22;UBERON:0003894!3.23e-15!22;UBERON:0004161!3.23e-15!22;UBERON:0008836!3.23e-15!22;UBERON:0009854!4.03e-14!23;UBERON:0009856!4.03e-14!23;UBERON:0005172!4.95e-13!49;UBERON:0005173!4.95e-13!49;UBERON:0002417!4.95e-13!49;UBERON:0000916!4.95e-13!49;UBERON:0002365!3.26e-12!25;UBERON:0002330!3.26e-12!25;UBERON:0003914!2.82e-10!47;UBERON:0009569!8.51e-09!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.67e-29,22;UBERON:0007499,3.67e-29,22;UBERON:0006925,3.67e-29,22;UBERON:0009497,3.67e-29,22;UBERON:0000015,3.67e-29,22;UBERON:0002423,3.67e-29,22;UBERON:0006235,3.67e-29,22;UBERON:0008835,3.67e-29,22;UBERON:0003894,3.67e-29,22;UBERON:0004161,3.67e-29,22;UBERON:0008836,3.67e-29,22;UBERON:0009854,1.09e-27,23;UBERON:0009856,1.09e-27,23;UBERON:0002365,4.22e-25,25;UBERON:0002330,4.22e-25,25;UBERON:0005172,1.88e-23,49;UBERON:0005173,1.88e-23,49;UBERON:0002417,1.88e-23,49;UBERON:0000916,1.88e-23,49;UBERON:0003104,1.39e-17,61;UBERON:0009142,1.39e-17,61;UBERON:0009569,9.02e-16,66;UBERON:0003914,8.67e-13,47;UBERON:0005177,3.81e-12,79;UBERON:0005256,6.43e-12,45;UBERON:0002100,6.56e-10,90;UBERON:0003929,5.86e-09,55;UBERON:0002368,7.37e-08,60;UBERON:0002113,1.99e-07,14;UBERON:0003918,1.99e-07,14;UBERON:0011143,1.99e-07,14;UBERON:0005095,1.99e-07,14;UBERON:0007687,1.99e-07,14;UBERON:0002530,6.19e-07,65;UBERON:0000490,9.09e-07,66 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,3.44169550792555,4.0798280022465,7.01614149129162,8.4470934268197,8.06448396775204,2.80888840263504,0,0,0,0,0,0,0,0,0,0,6.96521666286266,0,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0.879666139307728,0,5.06097749219691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0,0.462801338662135,0.697601834251224,0,0.233530684734339,0.822799249567402,0.164167464079095,0.0810688095458557,0,0.439100230582101,0.268412837520744,0,0,0,0,0.426576501070468,0,0.257734922644187,1.00841762311671,1.33426826306922,1.52180500890047,0,1.31759163779209,1.00534083520108,2.18852119245266,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,2.24016460629846,3.68509725618489,3.7873342740772,5.75452487830741,8.85660887877613,14.2868842335651,14.3140710149289,9.48648406678877,0.333690211432188,0.982794975566015,0.674586337154561,1.01430060694251,1.20588579876208,1.78238096246994,5.4662266115654,2.59416362840057,3.29473695825698,1.43768206527355,3.72140947668503,3.12037673114561,4.04126204715379,3.58794827043824,12.5435315554475,0,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0.252470927204373,0,0,0,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.888986911206461,0.206035057238894,1.28367683836726,1.26348605881899,0.25347929989024,0.943131706930381,0.468207537349412,0.512201219238954,0.976402972245426,0.476293691283074,0.463537303779422,1.15745532278223,0.824171801606613,1.17759136107518,1.02860775715625,0.887379030796687,0.238436189947321,0.872078499793971,0.376437521661322,0.507687647350059,0.914639864363863,1.31534855718921,0.543216455383447,1.12228454331548,0.830445126869219,0.492522411877817,0,0.464810523557898,0.964533054905707,0,0.701794825336225,1.28922632428979,0.382576664137687,0.220591419119515,0.927471342481686 | |||
|short_description=p4@2810055F11Rik | |||
}} |
Revision as of 23:06, 12 September 2013
Short description: | p4@2810055F11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2810055F11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | 272bp_to_ENSMUST00000138029_5end |
EntrezGene: | 2810055F11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.06e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.67e-29 | 22 |
epithelial sac | 3.67e-29 | 22 |
digestive gland | 3.67e-29 | 22 |
epithelium of foregut-midgut junction | 3.67e-29 | 22 |
anatomical boundary | 3.67e-29 | 22 |
hepatobiliary system | 3.67e-29 | 22 |
foregut-midgut junction | 3.67e-29 | 22 |
hepatic diverticulum | 3.67e-29 | 22 |
liver primordium | 3.67e-29 | 22 |
septum transversum | 3.67e-29 | 22 |
liver bud | 3.67e-29 | 22 |
digestive tract diverticulum | 1.09e-27 | 23 |
sac | 1.09e-27 | 23 |
exocrine gland | 4.22e-25 | 25 |
exocrine system | 4.22e-25 | 25 |
abdomen element | 1.88e-23 | 49 |
abdominal segment element | 1.88e-23 | 49 |
abdominal segment of trunk | 1.88e-23 | 49 |
abdomen | 1.88e-23 | 49 |
mesenchyme | 1.39e-17 | 61 |
entire embryonic mesenchyme | 1.39e-17 | 61 |
subdivision of trunk | 9.02e-16 | 66 |
epithelial tube | 8.67e-13 | 47 |
trunk region element | 3.81e-12 | 79 |
trunk mesenchyme | 6.43e-12 | 45 |
trunk | 6.56e-10 | 90 |
gut epithelium | 5.86e-09 | 55 |
endocrine gland | 7.37e-08 | 60 |
kidney | 1.99e-07 | 14 |
kidney mesenchyme | 1.99e-07 | 14 |
upper urinary tract | 1.99e-07 | 14 |
kidney rudiment | 1.99e-07 | 14 |
kidney field | 1.99e-07 | 14 |
gland | 6.19e-07 | 65 |
unilaminar epithelium | 9.09e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.