FFCP PHASE1:Mm9::chr12:86796129..86796142,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:86796129..86796142,-|id=chr12:86796129..86796142,-|ontology_enrichment_celltype=CL:0000063!4.14e-13!66;CL:0000144!2.62e-09!121;CL:0000012!2.62e-09!121;CL:0000988!1.85e-08!32;CL:0002032!1.85e-08!32;CL:0000037!1.85e-08!32;CL:0000566!1.85e-08!32;CL:0000837!1.85e-08!32;CL:0000542!3.62e-08!13;CL:0000051!3.62e-08!13;CL:0002371!7.60e-08!118;CL:0000838!1.76e-07!12;CL:0002563!6.11e-07!9;CL:0002251!6.11e-07!9;CL:0000548!6.36e-07!115;CL:0000004!6.36e-07!115;CL:0000255!6.36e-07!115;CL:0002320!6.74e-07!46;CL:0000134!6.74e-07!46;CL:0000219!7.17e-07!54|ontology_enrichment_celltype_v019_2=CL:0002250,2.30e-16,3;CL:0002563,3.06e-09,9;CL:0002251,3.06e-09,9;CL:0000066,4.05e-09,25;CL:0000223,1.42e-08,20;CL:0002076,3.08e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!4.05e-09!11;UBERON:0003350!6.11e-07!9;UBERON:0004808!6.11e-07!9;UBERON:0001277!6.11e-07!9;UBERON:0002384!6.74e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.92e-11,11;UBERON:0003350,3.06e-09,9;UBERON:0004808,3.06e-09,9;UBERON:0001277,3.06e-09,9|phase1_expression=0.80074423552397,0,0,0.30246421130683,1.00179145989269,0.839396359559449,0.467225281191051,1.67860320474049,0.703943610758334,0.70219357896598,0,0,1.54080656938085,1.39872643870396,0.999329285446988,0,0,1.57731082679119,0.822686601634433,1.27316895539409,0.0850432901510698,0.198581902401771,0.261199789138935,0,0,0,0.430761996159075,0.861884930743556,0,0,0,0,0,0,9.82095507154334,1.99481574430191,5.71674197534634,0.837063261473815,2.3440060335714,0,36.4703522579229,2.73218193983378,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,1.17447824240415,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,1.44932244350839,0,0,0,0,0,0,0,0,0.70667914902068,1.83096445709685,1.28326477414318,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0.646703978798527,0.756424320671277,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,1.39951452323658,0.138199973804424,0,0.474503990371703,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr12:86796129..86796142,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:86796129..86796142,- | |||
|id=chr12:86796129..86796142,- | |||
|ontology_enrichment_celltype=CL:0000063!4.14e-13!66;CL:0000144!2.62e-09!121;CL:0000012!2.62e-09!121;CL:0000988!1.85e-08!32;CL:0002032!1.85e-08!32;CL:0000037!1.85e-08!32;CL:0000566!1.85e-08!32;CL:0000837!1.85e-08!32;CL:0000542!3.62e-08!13;CL:0000051!3.62e-08!13;CL:0002371!7.60e-08!118;CL:0000838!1.76e-07!12;CL:0002563!6.11e-07!9;CL:0002251!6.11e-07!9;CL:0000548!6.36e-07!115;CL:0000004!6.36e-07!115;CL:0000255!6.36e-07!115;CL:0002320!6.74e-07!46;CL:0000134!6.74e-07!46;CL:0000219!7.17e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.30e-16,3;CL:0002563,3.06e-09,9;CL:0002251,3.06e-09,9;CL:0000066,4.05e-09,25;CL:0000223,1.42e-08,20;CL:0002076,3.08e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!4.05e-09!11;UBERON:0003350!6.11e-07!9;UBERON:0004808!6.11e-07!9;UBERON:0001277!6.11e-07!9;UBERON:0002384!6.74e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.92e-11,11;UBERON:0003350,3.06e-09,9;UBERON:0004808,3.06e-09,9;UBERON:0001277,3.06e-09,9 | |||
|phase1_expression=0.80074423552397,0,0,0.30246421130683,1.00179145989269,0.839396359559449,0.467225281191051,1.67860320474049,0.703943610758334,0.70219357896598,0,0,1.54080656938085,1.39872643870396,0.999329285446988,0,0,1.57731082679119,0.822686601634433,1.27316895539409,0.0850432901510698,0.198581902401771,0.261199789138935,0,0,0,0.430761996159075,0.861884930743556,0,0,0,0,0,0,9.82095507154334,1.99481574430191,5.71674197534634,0.837063261473815,2.3440060335714,0,36.4703522579229,2.73218193983378,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,1.17447824240415,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,1.44932244350839,0,0,0,0,0,0,0,0,0.70667914902068,1.83096445709685,1.28326477414318,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0.646703978798527,0.756424320671277,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,1.39951452323658,0.138199973804424,0,0.474503990371703,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr12:86796129..86796142,- | |||
}} |
Revision as of 23:30, 12 September 2013
Short description: | p@chr12:86796129..86796142, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:86796129..86796142, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.30e-16 | 3 |
intestinal epithelial cell | 3.06e-09 | 9 |
epithelial cell of alimentary canal | 3.06e-09 | 9 |
epithelial cell | 4.05e-09 | 25 |
endodermal cell | 1.42e-08 | 20 |
endo-epithelial cell | 3.08e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.92e-11 | 11 |
epithelium of mucosa | 3.06e-09 | 9 |
gastrointestinal system epithelium | 3.06e-09 | 9 |
intestinal epithelium | 3.06e-09 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.