FFCP PHASE1:Mm9::chr13:113886116..113886128,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=129|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:113886116..113886128,+|id=chr13:113886116..113886128,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.00e-15!130;UBERON:0000925!5.00e-15!130;UBERON:0006595!5.00e-15!130;UBERON:0001007!3.44e-14!128;UBERON:0001555!3.44e-14!128;UBERON:0007026!3.44e-14!128;UBERON:0002370!1.42e-13!23;UBERON:0000974!1.42e-13!23;UBERON:0004807!1.42e-13!23;UBERON:0005058!1.42e-13!23;UBERON:0003351!1.42e-13!23;UBERON:0009113!1.42e-13!23;UBERON:0003295!1.42e-13!23;UBERON:0009722!1.42e-13!23;UBERON:0005562!1.42e-13!23;UBERON:0007690!1.42e-13!23;UBERON:0005911!2.65e-13!69;UBERON:0004921!2.72e-13!126;UBERON:0004185!2.72e-13!126;UBERON:0006562!6.75e-13!24;UBERON:0003408!6.75e-13!24;UBERON:0001557!6.75e-13!24;UBERON:0001042!6.75e-13!24;UBERON:0008814!6.75e-13!24;UBERON:0009145!6.75e-13!24;UBERON:0003929!6.13e-12!55;UBERON:0000065!1.19e-11!41;UBERON:0001004!2.75e-11!42;UBERON:0000072!3.64e-11!27;UBERON:0005057!2.36e-10!51;UBERON:0004177!3.27e-10!29;UBERON:0000063!1.40e-09!35;UBERON:0002368!2.54e-09!60;UBERON:0000490!3.24e-09!66;UBERON:0000331!1.08e-08!3;UBERON:0002116!1.08e-08!3;UBERON:0001204!1.08e-08!3;UBERON:0001168!1.08e-08!3;UBERON:0002405!1.37e-08!70;UBERON:0002530!2.73e-08!65;UBERON:0000344!2.12e-07!15;UBERON:0002193!2.43e-07!48;UBERON:0000077!4.25e-07!97;UBERON:0000949!4.29e-07!72;UBERON:0001041!7.13e-07!92;UBERON:0002390!8.89e-07!45;UBERON:0003061!8.89e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0000331,3.89e-20,3;UBERON:0002116,3.89e-20,3;UBERON:0001204,3.89e-20,3;UBERON:0001168,3.89e-20,3;UBERON:0002108,2.21e-15,4;UBERON:0002370,9.84e-11,23;UBERON:0000974,9.84e-11,23;UBERON:0004807,9.84e-11,23;UBERON:0005058,9.84e-11,23;UBERON:0003351,9.84e-11,23;UBERON:0009113,9.84e-11,23;UBERON:0003295,9.84e-11,23;UBERON:0009722,9.84e-11,23;UBERON:0005562,9.84e-11,23;UBERON:0007690,9.84e-11,23;UBERON:0006562,2.62e-10,24;UBERON:0003408,2.62e-10,24;UBERON:0001557,2.62e-10,24;UBERON:0001042,2.62e-10,24;UBERON:0008814,2.62e-10,24;UBERON:0009145,2.62e-10,24;UBERON:0000072,3.20e-09,27;UBERON:0004177,1.28e-08,29;UBERON:0005057,1.28e-08,29;UBERON:0000077,3.18e-07,35;UBERON:0007811,4.91e-07,36|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0,0,0,0,0.45881856213434,0,0,0,0.380046838912748,1.51218077855958,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,4.86540516696394,3.08132871494482,2.33857481360031,1.07416017400489,0.596044064343795,0.600977247599844,0,0.605798699688886,0.381034033274999,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr13:113886116..113886128,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=129 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:113886116..113886128,+ | |||
|id=chr13:113886116..113886128,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.00e-15!130;UBERON:0000925!5.00e-15!130;UBERON:0006595!5.00e-15!130;UBERON:0001007!3.44e-14!128;UBERON:0001555!3.44e-14!128;UBERON:0007026!3.44e-14!128;UBERON:0002370!1.42e-13!23;UBERON:0000974!1.42e-13!23;UBERON:0004807!1.42e-13!23;UBERON:0005058!1.42e-13!23;UBERON:0003351!1.42e-13!23;UBERON:0009113!1.42e-13!23;UBERON:0003295!1.42e-13!23;UBERON:0009722!1.42e-13!23;UBERON:0005562!1.42e-13!23;UBERON:0007690!1.42e-13!23;UBERON:0005911!2.65e-13!69;UBERON:0004921!2.72e-13!126;UBERON:0004185!2.72e-13!126;UBERON:0006562!6.75e-13!24;UBERON:0003408!6.75e-13!24;UBERON:0001557!6.75e-13!24;UBERON:0001042!6.75e-13!24;UBERON:0008814!6.75e-13!24;UBERON:0009145!6.75e-13!24;UBERON:0003929!6.13e-12!55;UBERON:0000065!1.19e-11!41;UBERON:0001004!2.75e-11!42;UBERON:0000072!3.64e-11!27;UBERON:0005057!2.36e-10!51;UBERON:0004177!3.27e-10!29;UBERON:0000063!1.40e-09!35;UBERON:0002368!2.54e-09!60;UBERON:0000490!3.24e-09!66;UBERON:0000331!1.08e-08!3;UBERON:0002116!1.08e-08!3;UBERON:0001204!1.08e-08!3;UBERON:0001168!1.08e-08!3;UBERON:0002405!1.37e-08!70;UBERON:0002530!2.73e-08!65;UBERON:0000344!2.12e-07!15;UBERON:0002193!2.43e-07!48;UBERON:0000077!4.25e-07!97;UBERON:0000949!4.29e-07!72;UBERON:0001041!7.13e-07!92;UBERON:0002390!8.89e-07!45;UBERON:0003061!8.89e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,3.89e-20,3;UBERON:0002116,3.89e-20,3;UBERON:0001204,3.89e-20,3;UBERON:0001168,3.89e-20,3;UBERON:0002108,2.21e-15,4;UBERON:0002370,9.84e-11,23;UBERON:0000974,9.84e-11,23;UBERON:0004807,9.84e-11,23;UBERON:0005058,9.84e-11,23;UBERON:0003351,9.84e-11,23;UBERON:0009113,9.84e-11,23;UBERON:0003295,9.84e-11,23;UBERON:0009722,9.84e-11,23;UBERON:0005562,9.84e-11,23;UBERON:0007690,9.84e-11,23;UBERON:0006562,2.62e-10,24;UBERON:0003408,2.62e-10,24;UBERON:0001557,2.62e-10,24;UBERON:0001042,2.62e-10,24;UBERON:0008814,2.62e-10,24;UBERON:0009145,2.62e-10,24;UBERON:0000072,3.20e-09,27;UBERON:0004177,1.28e-08,29;UBERON:0005057,1.28e-08,29;UBERON:0000077,3.18e-07,35;UBERON:0007811,4.91e-07,36 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0,0,0,0,0.45881856213434,0,0,0,0.380046838912748,1.51218077855958,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,4.86540516696394,3.08132871494482,2.33857481360031,1.07416017400489,0.596044064343795,0.600977247599844,0,0.605798699688886,0.381034033274999,0.201652370273681,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr13:113886116..113886128,+ | |||
}} |
Revision as of 23:55, 12 September 2013
Short description: | p@chr13:113886116..113886128, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:113886116..113886128, + |
Coexpression cluster: | MCL_coexpression_mm9:129 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 3.89e-20 | 3 |
ileum | 3.89e-20 | 3 |
mucosa of small intestine | 3.89e-20 | 3 |
wall of small intestine | 3.89e-20 | 3 |
small intestine | 2.21e-15 | 4 |
thymus | 9.84e-11 | 23 |
neck | 9.84e-11 | 23 |
respiratory system epithelium | 9.84e-11 | 23 |
hemolymphoid system gland | 9.84e-11 | 23 |
pharyngeal epithelium | 9.84e-11 | 23 |
thymic region | 9.84e-11 | 23 |
pharyngeal gland | 9.84e-11 | 23 |
entire pharyngeal arch endoderm | 9.84e-11 | 23 |
thymus primordium | 9.84e-11 | 23 |
early pharyngeal endoderm | 9.84e-11 | 23 |
pharynx | 2.62e-10 | 24 |
gland of gut | 2.62e-10 | 24 |
upper respiratory tract | 2.62e-10 | 24 |
chordate pharynx | 2.62e-10 | 24 |
pharyngeal arch system | 2.62e-10 | 24 |
pharyngeal region of foregut | 2.62e-10 | 24 |
segment of respiratory tract | 3.20e-09 | 27 |
hemopoietic organ | 1.28e-08 | 29 |
immune organ | 1.28e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.18e-07 | 35 |
craniocervical region | 4.91e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.