FFCP PHASE1:Mm9::chr13:12708349..12708352,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=67|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:12708349..12708352,-|id=chr13:12708349..12708352,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!3.73e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.41e-09,32;UBERON:0002100,1.15e-07,90;UBERON:0005178,1.43e-07,17;UBERON:0005181,1.43e-07,17;UBERON:0002224,1.43e-07,17;UBERON:0000915,1.43e-07,17;UBERON:0008947,1.43e-07,17;UBERON:0003258,1.43e-07,17;UBERON:0009569,7.38e-07,66|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.524522414513984,1.66554880907831,1.21485160433896,0.699561878128147,3.94327706697797,2.19383093769182,2.54633791078818,0.510259740906419,1.09220046320974,1.56719873483361,0.799962113967033,2.2940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0.252030129759931,0.886922042621219,0,0,0,0.288851619751275,0,0,4.18531630736908,2.3440060335714,0,8.82347232046521,15.0270006690858,2.91306211818692,2.64383317748712,3.24406179902447,3.12029478674859,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,1.17447824240415,0,0,1.02903774414379,1.71920063963254,1.03134418455488,0.404632921719196,0.528990979272033,0.633831403506179,0,0,9.89889689009539,4.94433181283487,4.9733608046227,1.79760066311043,0.768436610643109,0.518448061542388,1.62007125998029,0.841299845405528,0.856952953211411,0.220868540951614,0.857435594504678,0.766763768145891,0.919218786610021,0,0.127687338085188,0.153606533256243,1.05509030184155,1.37231465403614,0.52091337055676,0.837548997004143,0,0.30559649555362,0.589257170947335,1.13897344639282,0.745597783301202,0.984440513331393,1.73814588245607,0.579728977403356,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0.852151612890289,1.29893002301434,0.35333957451034,0.563373679106722,0,0,0,3.68034769719064,2.78695852022608,3.0331466700887,1.02765491747154,0.776813650941515,1.33597925158342,1.04091196059682,1.21786191324856,0.691846491768175,0.904335843315735,1.52865319276416,0.251333182659351,0.988779870937496,0.578397427679647,1.76922110389975,0.808834249737046,1.10420759230197,0.484875253135222,0,0.585561594023094,0.41889341362691,0,1.43778149407104,1.79970819298022,1.14363204365758,0.898743836428936,0,0.251308704225729,0.695297280769106,0.511430914660661,0.20778804455956,0.162241263067758,0.81471491080253,1.24406970610093,0,2.10441855886474,1.43132487258974,1.37941262660084,0.900310649026746,1.05493372485001,1.83698547708585,3.20284300712124,1.49922759295566,1.03481348295606,0.215567992932842,0.756424320671277,0.351902248327898,1.31517439456545,1.11218899690239,1.0447564995665,1.02891068203972,0.995171334092466,0,0.772043721344145,0.852490498186778,0.828503090142008,0.469052119962192,0.180062061461015,0.473489471170421,0.393528463494808,0.925602677324269,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0.492502392237286,0.891756905004413,0.877199924551994,0.219550115291051,0.939444931322602,0.420579897128254,0.720332286654991,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0.889512175379481,0.380451252225118,0,0.164698954724011,0.754005626400808,1.39269530428806,0.779856348476481,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,0.228497025219458,1.1270773567308,1.83286195060783,0.969762435838129,0.841629838683823,2.40298841072178,5.75679577120448,5.33795674660674,2.96153193412321,0.889357881261447,0.166845105716094,0,0.224862112384854,0.405720242777006,0.482354319504834,0,0.575392274901621,2.2698931748505,0.823684239564244,7.18841032636773,1.11642284300551,1.24815069245824,0.252578877947112,0.358794827043824,0.482443521363367,2.40179147216586,0.37898282354097,0.325929952884052,1.01847051465113,0.938760993154008,1.67506257441816,0.952174563544055,2.14647012643579,1.7339865851681,1.7717175171902,1.91345722388985,3.76885623846197,2.07221978239075,2.60368305446721,39.2057338242108,32.0904353453039,0.491764273019036,0.551873492609465,0.160550589987792,0.35163505977661,0.327869890753351,0,0.94652465824877,0.390438744296638,0.430846795465598,0.716906393857656,1.55959071857676,0.566153061577665,2.02405350837447,1.46127928955656,1.18586333383957,0,0.283880170416537,1.06839362200353,0.488660878060728,0.659880491890142,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,0.540183282093931,0.776152102696527,0.214337035031592,0.177340233642274,0.891844088010353,0.658196082408484,0,2.3467170806371,2.96564899209348,0,0.49465875882444,0.484393280087717,0.844380948994182,1.67121281604391,1.14898629821543,0,0.556275906031529,2.9048049735635,0.619160603889667,0.185194527369712,2.63715839806567,2.46049609897845,1.37266903923914,0.509935289981566,1.119611618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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:12708349..12708352,- | |||
|id=chr13:12708349..12708352,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.73e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.41e-09,32;UBERON:0002100,1.15e-07,90;UBERON:0005178,1.43e-07,17;UBERON:0005181,1.43e-07,17;UBERON:0002224,1.43e-07,17;UBERON:0000915,1.43e-07,17;UBERON:0008947,1.43e-07,17;UBERON:0003258,1.43e-07,17;UBERON:0009569,7.38e-07,66 | |||
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| |||
|short_description=p@chr13:12708349..12708352,- | |||
}} |
Revision as of 00:01, 13 September 2013
Short description: | p@chr13:12708349..12708352, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:12708349..12708352, - |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.41e-09 | 32 |
trunk | 1.15e-07 | 90 |
thoracic cavity element | 1.43e-07 | 17 |
thoracic segment organ | 1.43e-07 | 17 |
thoracic cavity | 1.43e-07 | 17 |
thoracic segment of trunk | 1.43e-07 | 17 |
respiratory primordium | 1.43e-07 | 17 |
endoderm of foregut | 1.43e-07 | 17 |
subdivision of trunk | 7.38e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.