FFCP PHASE1:Mm9::chr13:22028056..22028060,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=160|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:22028056..22028060,+|id=chr13:22028056..22028060,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!1.57e-23!14;UBERON:0003135!7.80e-22!15;UBERON:0000991!1.18e-21!18;UBERON:0005564!1.18e-21!18;UBERON:0003101!2.37e-20!16;UBERON:0000079!2.37e-20!16;UBERON:0004176!4.83e-19!17;UBERON:0009196!4.83e-19!17;UBERON:0009117!4.83e-19!17;UBERON:0003133!1.07e-15!24;UBERON:0005156!2.55e-14!26;UBERON:0000990!2.55e-14!26;UBERON:0002323!2.03e-09!37;UBERON:0004458!2.03e-09!37;UBERON:0003886!4.10e-09!38;UBERON:0002553!7.97e-09!39|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-49,14;UBERON:0003135,2.35e-46,15;UBERON:0003101,1.78e-43,16;UBERON:0000079,1.78e-43,16;UBERON:0004176,6.20e-41,17;UBERON:0009196,6.20e-41,17;UBERON:0009117,6.20e-41,17;UBERON:0000991,1.13e-38,18;UBERON:0005564,1.13e-38,18;UBERON:0003133,4.66e-29,24;UBERON:0005156,7.77e-27,26;UBERON:0000990,7.77e-27,26;UBERON:0002323,6.84e-19,37;UBERON:0004458,6.84e-19,37;UBERON:0003886,2.14e-18,38;UBERON:0002553,6.32e-18,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0.56369293868419,1.64468200648377,1.98550188548517,2.33341426012857,1.93739735216597,2.53434188236167,1.64300134104056,1.95306577265925,1.04859344425711,0,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:22028056..22028060,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=160 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:22028056..22028060,+ | |||
|id=chr13:22028056..22028060,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.57e-23!14;UBERON:0003135!7.80e-22!15;UBERON:0000991!1.18e-21!18;UBERON:0005564!1.18e-21!18;UBERON:0003101!2.37e-20!16;UBERON:0000079!2.37e-20!16;UBERON:0004176!4.83e-19!17;UBERON:0009196!4.83e-19!17;UBERON:0009117!4.83e-19!17;UBERON:0003133!1.07e-15!24;UBERON:0005156!2.55e-14!26;UBERON:0000990!2.55e-14!26;UBERON:0002323!2.03e-09!37;UBERON:0004458!2.03e-09!37;UBERON:0003886!4.10e-09!38;UBERON:0002553!7.97e-09!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-49,14;UBERON:0003135,2.35e-46,15;UBERON:0003101,1.78e-43,16;UBERON:0000079,1.78e-43,16;UBERON:0004176,6.20e-41,17;UBERON:0009196,6.20e-41,17;UBERON:0009117,6.20e-41,17;UBERON:0000991,1.13e-38,18;UBERON:0005564,1.13e-38,18;UBERON:0003133,4.66e-29,24;UBERON:0005156,7.77e-27,26;UBERON:0000990,7.77e-27,26;UBERON:0002323,6.84e-19,37;UBERON:0004458,6.84e-19,37;UBERON:0003886,2.14e-18,38;UBERON:0002553,6.32e-18,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0.56369293868419,1.64468200648377,1.98550188548517,2.33341426012857,1.93739735216597,2.53434188236167,1.64300134104056,1.95306577265925,1.04859344425711,0,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:22028056..22028060,+ | |||
}} |
Revision as of 00:09, 13 September 2013
Short description: | p@chr13:22028056..22028060, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:22028056..22028060, + |
Coexpression cluster: | MCL_coexpression_mm9:160 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.21e-49 | 14 |
male reproductive organ | 2.35e-46 | 15 |
male organism | 1.78e-43 | 16 |
male reproductive system | 1.78e-43 | 16 |
external genitalia | 6.20e-41 | 17 |
indifferent external genitalia | 6.20e-41 | 17 |
indifferent gonad | 6.20e-41 | 17 |
gonad | 1.13e-38 | 18 |
gonad primordium | 1.13e-38 | 18 |
reproductive organ | 4.66e-29 | 24 |
reproductive structure | 7.77e-27 | 26 |
reproductive system | 7.77e-27 | 26 |
body cavity | 6.84e-19 | 37 |
body cavity or lining | 6.84e-19 | 37 |
body cavity precursor | 2.14e-18 | 38 |
anatomical cavity | 6.32e-18 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.