FFCP PHASE1:Mm9::chr13:28810669..28810674,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1112|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:28810669..28810674,-|id=chr13:28810669..28810674,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000065,6.53e-10,41;UBERON:0001004,1.49e-09,42;UBERON:0000153,2.33e-09,43;UBERON:0007811,4.17e-07,36;UBERON:0002370,4.40e-07,23;UBERON:0000974,4.40e-07,23;UBERON:0004807,4.40e-07,23;UBERON:0005058,4.40e-07,23;UBERON:0003351,4.40e-07,23;UBERON:0009113,4.40e-07,23;UBERON:0003295,4.40e-07,23;UBERON:0009722,4.40e-07,23;UBERON:0005562,4.40e-07,23;UBERON:0007690,4.40e-07,23|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,0.510259740906419,0.794327609607082,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0,0.829516898467821,0,0,0,0,0,0.479227355091182,0,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0,0.294628585473668,0.427115042397309,0.931997229126503,0.302904773332736,0.68014404096107,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0.838705871541442,0,0.381210681219194,0.299581278809645,0,0.376963056338593,0,0,0,0,0.712875546952214,0.622034853050465,0.758168275301024,0,1.04096354370163,0.229902104433473,0.180062129805349,1.9591626318643,0.816437989815934,1.7935920839879,1.40552586839593,0,0,2.45837904218165,1.58356011747554,0.657587197282725,1.94633074457919,0.348252166522167,1.02891068203972,1.39323986772945,0.702213187313235,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.473489471170421,1.18058539048442,0.617068451549513,0,0.268273401399619,0.700592054203017,0.493679549740441,0.820837320395476,0.486412857275134,0.292399974850665,0.658650345873152,0.805238512562231,0.210289948564127,0.411618449517138,0,0.264450566663544,1.06644125267617,1.39342003116263,0.257734922644187,0.80673409849337,0,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,1.71372768914593,1.1270773567308,0.814605311381257,1.16371492300575,0.631222379012867,0.442655759869801,0.738050739898011,0.627994911365499,0.987177311374404,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.554259570499814,0.947457058852424,0.651859905768103,1.18821560042632,2.11221223459652,1.00503754465089,0.952174563544055,0.390267295715598,1.7339865851681,1.7717175171902,2.23236676120482,1.47476983244164,1.03610989119537,0.867894351489069,0,0,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0,3.15508219416257,1.95219372148319,0.861693590931196,1.19484398976276,0.891194696329576,1.13230612315533,0.809621403349789,1.46127928955656,1.58115111178609,0.321321316421807,1.13552068166615,0.712262414669021,1.14020871547503,0.989820737835213,0,0.971122544619926,1.81394134178851,0,0.295301892880773,0,0.258428293168221,0.363533729477506,1.78248689192361,1.26414703174326,0,0,1.02131881726136,2.16073312837572,0.388076051348264,1.07168517515796,0.886701168211368,0.535106452806212,1.48094118541909,0,0,0,0,0.32977250588296,0.968786560175433,0.784068024066026,1.43246812803764,0.984845398470368,0,0,0,0.619160603889667,0,0,0,0,0.679913719975421,0,0,0,0.316335993581135,0.609958401380546,0.540026704109006,0.836353184057875,0.436725127492355,0.269728692769641,0.578574190077352,0.26175594198403,0,0.621339313086926,0.56369293868419,0.448549638131936,1.15820943319968,0.194451188344048,0.516639293910924,0.844780627453891,0.704143431874524,0.651021924219751,0.524296722128554,0.241584120826006,0.288030006257865,2.8441000856536,0.202725215290164,0.616265742988964,0.909445760844565,1.07416017400489,1.19208812868759,1.9231271923195,3.39685912501528,4.13962444787405,3.12447907285499,4.33552596088414,4.19068887180935,4.42574471545516,5.02570679380746,0.680191150845634,0,0,0,1.15913756419314,0.375364950902364,0.549454872801795,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,1.87806966329548,0.729320151204882,0,0.183843508450014,0.222246727801615,1.44224540067226,0.320919209591815,0.252697211763798,1.77435509923168,0.943131706930381,0.187283014939765,0.384150914429216,0.34461281373368,0.476293691283074,0.695305955669133,0.77163688185482,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.872078499793971,0.376437521661322,0.930760686808441,0.365855945745545,0.526139422875686,0.950628796921032,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0.964533054905707,0.499621155875892,0.701794825336225,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p@chr13:28810669..28810674,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1112 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:28810669..28810674,- | |||
|id=chr13:28810669..28810674,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,6.53e-10,41;UBERON:0001004,1.49e-09,42;UBERON:0000153,2.33e-09,43;UBERON:0007811,4.17e-07,36;UBERON:0002370,4.40e-07,23;UBERON:0000974,4.40e-07,23;UBERON:0004807,4.40e-07,23;UBERON:0005058,4.40e-07,23;UBERON:0003351,4.40e-07,23;UBERON:0009113,4.40e-07,23;UBERON:0003295,4.40e-07,23;UBERON:0009722,4.40e-07,23;UBERON:0005562,4.40e-07,23;UBERON:0007690,4.40e-07,23 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,0.510259740906419,0.794327609607082,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0,0.829516898467821,0,0,0,0,0,0.479227355091182,0,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0,0.294628585473668,0.427115042397309,0.931997229126503,0.302904773332736,0.68014404096107,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0.838705871541442,0,0.381210681219194,0.299581278809645,0,0.376963056338593,0,0,0,0,0.712875546952214,0.622034853050465,0.758168275301024,0,1.04096354370163,0.229902104433473,0.180062129805349,1.9591626318643,0.816437989815934,1.7935920839879,1.40552586839593,0,0,2.45837904218165,1.58356011747554,0.657587197282725,1.94633074457919,0.348252166522167,1.02891068203972,1.39323986772945,0.702213187313235,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.473489471170421,1.18058539048442,0.617068451549513,0,0.268273401399619,0.700592054203017,0.493679549740441,0.820837320395476,0.486412857275134,0.292399974850665,0.658650345873152,0.805238512562231,0.210289948564127,0.411618449517138,0,0.264450566663544,1.06644125267617,1.39342003116263,0.257734922644187,0.80673409849337,0,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,1.71372768914593,1.1270773567308,0.814605311381257,1.16371492300575,0.631222379012867,0.442655759869801,0.738050739898011,0.627994911365499,0.987177311374404,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.554259570499814,0.947457058852424,0.651859905768103,1.18821560042632,2.11221223459652,1.00503754465089,0.952174563544055,0.390267295715598,1.7339865851681,1.7717175171902,2.23236676120482,1.47476983244164,1.03610989119537,0.867894351489069,0,0,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0,3.15508219416257,1.95219372148319,0.861693590931196,1.19484398976276,0.891194696329576,1.13230612315533,0.809621403349789,1.46127928955656,1.58115111178609,0.321321316421807,1.13552068166615,0.712262414669021,1.14020871547503,0.989820737835213,0,0.971122544619926,1.81394134178851,0,0.295301892880773,0,0.258428293168221,0.363533729477506,1.78248689192361,1.26414703174326,0,0,1.02131881726136,2.16073312837572,0.388076051348264,1.07168517515796,0.886701168211368,0.535106452806212,1.48094118541909,0,0,0,0,0.32977250588296,0.968786560175433,0.784068024066026,1.43246812803764,0.984845398470368,0,0,0,0.619160603889667,0,0,0,0,0.679913719975421,0,0,0,0.316335993581135,0.609958401380546,0.540026704109006,0.836353184057875,0.436725127492355,0.269728692769641,0.578574190077352,0.26175594198403,0,0.621339313086926,0.56369293868419,0.448549638131936,1.15820943319968,0.194451188344048,0.516639293910924,0.844780627453891,0.704143431874524,0.651021924219751,0.524296722128554,0.241584120826006,0.288030006257865,2.8441000856536,0.202725215290164,0.616265742988964,0.909445760844565,1.07416017400489,1.19208812868759,1.9231271923195,3.39685912501528,4.13962444787405,3.12447907285499,4.33552596088414,4.19068887180935,4.42574471545516,5.02570679380746,0.680191150845634,0,0,0,1.15913756419314,0.375364950902364,0.549454872801795,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,1.87806966329548,0.729320151204882,0,0.183843508450014,0.222246727801615,1.44224540067226,0.320919209591815,0.252697211763798,1.77435509923168,0.943131706930381,0.187283014939765,0.384150914429216,0.34461281373368,0.476293691283074,0.695305955669133,0.77163688185482,0,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0.872078499793971,0.376437521661322,0.930760686808441,0.365855945745545,0.526139422875686,0.950628796921032,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.464810523557898,0.964533054905707,0.499621155875892,0.701794825336225,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr13:28810669..28810674,- | |||
}} |
Revision as of 00:17, 13 September 2013
Short description: | p@chr13:28810669..28810674, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:28810669..28810674, - |
Coexpression cluster: | MCL_coexpression_mm9:1112 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 6.53e-10 | 41 |
respiratory system | 1.49e-09 | 42 |
anterior region of body | 2.33e-09 | 43 |
craniocervical region | 4.17e-07 | 36 |
thymus | 4.40e-07 | 23 |
neck | 4.40e-07 | 23 |
respiratory system epithelium | 4.40e-07 | 23 |
hemolymphoid system gland | 4.40e-07 | 23 |
pharyngeal epithelium | 4.40e-07 | 23 |
thymic region | 4.40e-07 | 23 |
pharyngeal gland | 4.40e-07 | 23 |
entire pharyngeal arch endoderm | 4.40e-07 | 23 |
thymus primordium | 4.40e-07 | 23 |
early pharyngeal endoderm | 4.40e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.