FFCP PHASE1:Mm9::chr13:58229903..58229928,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77134|HGNC=|MCL_coexpression_id=1650|UniProt=Q9CX86|association_with_transcript=0bp_to_ENSMUST00000007980,NM_029872,uc007qtf.2_5end|description=CAGE_peak_1_at_Hnrnpa0_5end|id=chr13:58229903..58229928,-|ontology_enrichment_celltype=CL:0000144!3.59e-14!121;CL:0000012!3.59e-14!121;CL:0000548!1.09e-13!115;CL:0000004!1.09e-13!115;CL:0000255!1.09e-13!115;CL:0002371!6.35e-13!118;CL:0000034!6.24e-11!97;CL:0000723!5.03e-10!91;CL:0000048!5.03e-10!91;CL:0000063!2.51e-09!66;CL:0000221!9.47e-07!44;CL:0000133!9.47e-07!44;CL:0002321!9.49e-07!70;CL:0000220!9.49e-07!70|ontology_enrichment_celltype_v019_2=CL:0000034,6.24e-11,97;CL:0000723,5.03e-10,91;CL:0000048,5.03e-10,91;CL:0000221,9.47e-07,44;CL:0000133,9.47e-07,44;CL:0002321,9.49e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.02e-07,43|phase1_expression=221.646004393035,129.469876234203,120.119799198838,114.936400296595,155.277676283368,186.010233278374,142.503710763271,103.686028723586,317.337779729857,293.282851481458,198.099189236909,159.305001513687,125.147733579711,107.701935780205,127.914148537214,104.27476270576,130.118509331835,119.244698505414,111.474034521466,109.068140512094,54.5127489868357,121.532124269884,105.263515022991,64.9569236541231,85.5696618380544,113.123696930659,119.321072936064,109.02844373906,73.7290867490731,99.8039313849326,118.182362179277,110.495337181976,167.912687010588,142.633512913895,161.468055440963,151.605996566945,153.331186553039,85.7989843010661,89.8535646202371,63.3463730208296,79.4112508841869,95.6263678941824,93.2179877819815,64.0814803495688,86.7786531239045,97.6468721500146,174.473269789613,144.986728992997,93.3666276621505,82.2438473084219,106.24969401365,120.752154066576,160.400171391196,216.883280461392,155.275335203818,102.903774414379,93.1233679800959,106.744123101431,283.445361664297,231.169057941878,274.448997718176,182.976047317331,151.180115338894,144.883854482305,138.441290759376,156.305625288142,178.861265979488,213.625377758784,329.214519079417,320.774109476097,344.722611654915,127.6859900285,110.213401934855,325.213071915703,357.503606898022,295.988449288427,52.8556228797066,57.4593021383345,47.7716318426917,249.396970097797,259.093006682024,256.810291684483,60.5827107832997,97.9206941455123,59.8969131285096,109.012576625257,108.060105726519,198.888208695596,97.3838846264747,69.6769784184562,79.4228699042597,86.0423876981386,97.2359007202083,60.9864606550733,31.1892680374881,31.3618820968135,44.9422144421606,74.6484812891893,152.234598697281,140.275811080605,177.744395758171,121.910153543602,196.200034574117,298.648015324399,93.9571117988669,98.3036278043382,114.248524573341,50.3550909561054,22.0097201100096,50.6187694211052,150.064807652708,74.5940421864746,82.0991170231568,88.7756352854947,75.9623048096653,75.525621389135,70.4505658042966,19.5209131841881,76.0765074676892,97.0601099684455,87.6740828287762,70.7917869577424,106.24330389433,56.2139130262171,65.7662659394249,75.8707453969516,184.036031241094,204.566831268752,176.373475177414,34.1522657842996,46.6650614874999,199.287802451003,43.1084314076846,46.7959286914505,40.9342447782333,43.8051410282946,190.439610400091,84.223519103033,54.8408385801074,38.9317433389977,182.949342805561,257.030552756623,161.515730435398,136.689269776994,150.904955117645,121.067465669183,171.005647321505,25.6116337031625,252.861255710224,188.538761927316,166.449763459096,188.508329887714,115.111561179398,99.2518674588175,88.0747543825998,164.203270125257,128.505013278322,180.65823079453,159.699886660323,109.362407898745,98.5009451920604,117.940650256965,104.641173128663,108.023563229325,99.1937535865842,94.641315513416,103.285259538853,113.495912780889,111.077898691599,65.8311530957172,54.6403776339068,55.2635952467756,43.9100230582101,52.2062968977846,33.8566817188245,149.932020236617,25.7726650727362,49.1878053994192,173.61663593568,158.84988355254,106.315655590727,90.7575860805041,88.9512175379481,72.6661891749976,64.0614233085091,83.3376710903495,90.7320103768973,95.6980630517935,74.4762812795039,64.714997423104,52.0892700198013,52.5732961391529,198.392624396923,151.150782182671,148.774211088466,120.357934756581,128.396546504968,153.597445559798,79.9942194621855,56.387076528208,39.5636794160265,63.3027450918837,28.1629995732791,104.945571495423,113.021422190092,92.19346607779,89.8670337751068,93.3355608241853,79.1886399040216,75.0886918746616,98.7403531059965,75.2298272135343,332.104557078189,105.315888190186,67.7121750658596,43.9487247627974,39.2880335612988,56.445891999514,47.1120634924842,222.84190024209,154.979692596367,136.305303877476,124.151141344618,101.843804524624,101.168547376556,138.935157274753,64.7880442276445,95.2298165489732,101.572687634819,54.5664838003408,64.0661282722473,62.9223404829575,42.2215595029962,22.3001330365671,39.8329061145419,45.8054998865856,31.3073650476194,43.1339006659308,117.213485944323,49.7367726592615,146.08030558972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| ||
|EntrezGene=77134 | |||
|HGNC= | |||
|MCL_coexpression_id=1650 | |||
|UniProt=Q9CX86 | |||
|association_with_transcript=0bp_to_ENSMUST00000007980,NM_029872,uc007qtf.2_5end | |||
|description=CAGE_peak_1_at_Hnrnpa0_5end | |||
|id=chr13:58229903..58229928,- | |||
|ontology_enrichment_celltype=CL:0000144!3.59e-14!121;CL:0000012!3.59e-14!121;CL:0000548!1.09e-13!115;CL:0000004!1.09e-13!115;CL:0000255!1.09e-13!115;CL:0002371!6.35e-13!118;CL:0000034!6.24e-11!97;CL:0000723!5.03e-10!91;CL:0000048!5.03e-10!91;CL:0000063!2.51e-09!66;CL:0000221!9.47e-07!44;CL:0000133!9.47e-07!44;CL:0002321!9.49e-07!70;CL:0000220!9.49e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.24e-11,97;CL:0000723,5.03e-10,91;CL:0000048,5.03e-10,91;CL:0000221,9.47e-07,44;CL:0000133,9.47e-07,44;CL:0002321,9.49e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.02e-07,43 | |||
|phase1_expression=221.646004393035,129.469876234203,120.119799198838,114.936400296595,155.277676283368,186.010233278374,142.503710763271,103.686028723586,317.337779729857,293.282851481458,198.099189236909,159.305001513687,125.147733579711,107.701935780205,127.914148537214,104.27476270576,130.118509331835,119.244698505414,111.474034521466,109.068140512094,54.5127489868357,121.532124269884,105.263515022991,64.9569236541231,85.5696618380544,113.123696930659,119.321072936064,109.02844373906,73.7290867490731,99.8039313849326,118.182362179277,110.495337181976,167.912687010588,142.633512913895,161.468055440963,151.605996566945,153.331186553039,85.7989843010661,89.8535646202371,63.3463730208296,79.4112508841869,95.6263678941824,93.2179877819815,64.0814803495688,86.7786531239045,97.6468721500146,174.473269789613,144.986728992997,93.3666276621505,82.2438473084219,106.24969401365,120.752154066576,160.400171391196,216.883280461392,155.275335203818,102.903774414379,93.1233679800959,106.744123101431,283.445361664297,231.169057941878,274.448997718176,182.976047317331,151.180115338894,144.883854482305,138.441290759376,156.305625288142,178.861265979488,213.625377758784,329.214519079417,320.774109476097,344.722611654915,127.6859900285,110.213401934855,325.213071915703,357.503606898022,295.988449288427,52.8556228797066,57.4593021383345,47.7716318426917,249.396970097797,259.093006682024,256.810291684483,60.5827107832997,97.9206941455123,59.8969131285096,109.012576625257,108.060105726519,198.888208695596,97.3838846264747,69.6769784184562,79.4228699042597,86.0423876981386,97.2359007202083,60.9864606550733,31.1892680374881,31.3618820968135,44.9422144421606,74.6484812891893,152.234598697281,140.275811080605,177.744395758171,121.910153543602,196.200034574117,298.648015324399,93.9571117988669,98.3036278043382,114.248524573341,50.3550909561054,22.0097201100096,50.6187694211052,150.064807652708,74.5940421864746,82.0991170231568,88.7756352854947,75.9623048096653,75.525621389135,70.4505658042966,19.5209131841881,76.0765074676892,97.0601099684455,87.6740828287762,70.7917869577424,106.24330389433,56.2139130262171,65.7662659394249,75.8707453969516,184.036031241094,204.566831268752,176.373475177414,34.1522657842996,46.6650614874999,199.287802451003,43.1084314076846,46.7959286914505,40.9342447782333,43.8051410282946,190.439610400091,84.223519103033,54.8408385801074,38.9317433389977,182.949342805561,257.030552756623,161.515730435398,136.689269776994,150.904955117645,121.067465669183,171.005647321505,25.6116337031625,252.861255710224,188.538761927316,166.449763459096,188.508329887714,115.111561179398,99.2518674588175,88.0747543825998,164.203270125257,128.505013278322,180.65823079453,159.699886660323,109.362407898745,98.5009451920604,117.940650256965,104.641173128663,108.023563229325,99.1937535865842,94.641315513416,103.285259538853,113.495912780889,111.077898691599,65.8311530957172,54.6403776339068,55.2635952467756,43.9100230582101,52.2062968977846,33.8566817188245,149.932020236617,25.7726650727362,49.1878053994192,173.61663593568,158.84988355254,106.315655590727,90.7575860805041,88.9512175379481,72.6661891749976,64.0614233085091,83.3376710903495,90.7320103768973,95.6980630517935,74.4762812795039,64.714997423104,52.0892700198013,52.5732961391529,198.392624396923,151.150782182671,148.774211088466,120.357934756581,128.396546504968,153.597445559798,79.9942194621855,56.387076528208,39.5636794160265,63.3027450918837,28.1629995732791,104.945571495423,113.021422190092,92.19346607779,89.8670337751068,93.3355608241853,79.1886399040216,75.0886918746616,98.7403531059965,75.2298272135343,332.104557078189,105.315888190186,67.7121750658596,43.9487247627974,39.2880335612988,56.445891999514,47.1120634924842,222.84190024209,154.979692596367,136.305303877476,124.151141344618,101.843804524624,101.168547376556,138.935157274753,64.7880442276445,95.2298165489732,101.572687634819,54.5664838003408,64.0661282722473,62.9223404829575,42.2215595029962,22.3001330365671,39.8329061145419,45.8054998865856,31.3073650476194,43.1339006659308,117.213485944323,49.7367726592615,146.080305589727,108.541970914465,103.403230911743,149.355498720345,127.663640249212,138.14134702495,150.589581023061,120.701669317372,98.0313689307378,49.4834827289583,70.260342178093,191.420523942299,203.934473110677,76.711107182229,45.1333470355874,127.70261461752,136.045600634138,80.9115792152803,81.5033224350933,80.8554439092529,83.4723386933354,97.790573229449,84.489878677179,48.6696607221157,54.8176764589994,53.6304824890572,50.7255012573144,191.224881861251,204.386720376752,161.395787378789,112.611048362844,120.755689516602,121.108079163161,114.174355917975,69.2281538787946,51.0515290781807,49.8394179604214,55.7315534942203,77.8258536674265,89.5043805933833,107.673854290829,90.7699175590189,78.6998258900597,33.1911290598812,86.8024074453092,175.635224636702,99.2642666701655,81.5635418830312,80.2395116722418,89.4522657237503,182.556833813401,174.379509595278,182.976765317057,31.5041303944987,197.393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| |||
|short_description=p1@Hnrnpa0 | |||
}} | |||
Revision as of 00:54, 13 September 2013
| Short description: | p1@Hnrnpa0 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Hnrnpa0_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1650 |
| Association with transcript: | 0bp_to_ENSMUST00000007980, NM_029872, uc007qtf.2_5end |
| EntrezGene: | Hnrnpa0 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stem cell | 6.24e-11 | 97 |
| somatic stem cell | 5.03e-10 | 91 |
| multi fate stem cell | 5.03e-10 | 91 |
| ectodermal cell | 9.47e-07 | 44 |
| neurectodermal cell | 9.47e-07 | 44 |
| embryonic cell | 9.49e-07 | 70 |
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 2.02e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
