FFCP PHASE1:Mm9::chr13:99464780..99464802,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=380863|HGNC=|MCL_coexpression_id=195|UniProt=Q4KL18|association_with_transcript=0bp_to_ENSMUST00000064347,NM_001025606,uc007roy.1_5end|description=CAGE_peak_1_at_Tmem171_5end|id=chr13:99464780..99464802,-|ontology_enrichment_celltype=CL:0002563!1.17e-07!9;CL:0002251!1.17e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.15e-13,9;CL:0002251,1.15e-13,9;CL:0000239,4.54e-09,6;CL:0000677,4.54e-09,6;CL:0000584,4.54e-09,6;CL:0002076,4.61e-09,15;CL:0000066,2.99e-08,25;CL:0000075,1.15e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.76e-23!59;UBERON:0000160!5.41e-23!43;UBERON:0001007!1.81e-13!128;UBERON:0001555!1.81e-13!128;UBERON:0007026!1.81e-13!128;UBERON:0004119!2.24e-13!130;UBERON:0000925!2.24e-13!130;UBERON:0006595!2.24e-13!130;UBERON:0000344!2.15e-12!15;UBERON:0004921!2.29e-12!126;UBERON:0004185!2.29e-12!126;UBERON:0001242!6.35e-11!13;UBERON:0000060!6.35e-11!13;UBERON:0001262!6.35e-11!13;UBERON:0004786!6.35e-11!13;UBERON:0003350!1.17e-07!9;UBERON:0004808!1.17e-07!9;UBERON:0001277!1.17e-07!9;UBERON:0000485!7.45e-07!11;UBERON:0004923!8.31e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.03e-41,31;UBERON:0005409,2.41e-37,47;UBERON:0000344,4.58e-23,15;UBERON:0001242,3.85e-20,13;UBERON:0001262,3.85e-20,13;UBERON:0004786,3.85e-20,13;UBERON:0001007,2.99e-17,116;UBERON:0001555,2.99e-17,116;UBERON:0007026,2.99e-17,116;UBERON:0004119,8.92e-17,118;UBERON:0000925,8.92e-17,118;UBERON:0006595,8.92e-17,118;UBERON:0004921,2.02e-15,114;UBERON:0003350,1.15e-13,9;UBERON:0004808,1.15e-13,9;UBERON:0001277,1.15e-13,9;UBERON:0004923,6.53e-13,24;UBERON:0000485,7.73e-11,11;UBERON:0002108,8.94e-08,4|phase1_expression=0,2.09385244583617,2.27499619694768,6.35174843744343,1.00179145989269,1.84667199103079,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,3.35984087866154,3.44113921600755,2.29692785646008,2.15380998079537,4.95583835177545,7.22088993934221,3.78045194639896,4.21287970245079,0,0,0,4.33277429626912,4.3221007793208,6.32925004413344,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,1.7127581957859,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,18.6391761218122,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.729619285912702,0.438599962275997,1.3173006917463,0.805238512562231,0,0,10.9038198384653,2.90895623329899,0,0.464473343720877,0.644337306610467,3.02525286935014,5.55945109612176,7.41879941838981,6.16887780007865,6.58795818896044,5.27803938480566,12.9321706826748,6.82374304916921,4.49409704327111,9.94235029423593,10.5544874824815,0,0,0,0.610953983535943,0.969762435838129,1.05203729835478,1.7706230394792,2.36176236767363,1.41298855057237,2.71473760627961,0,0,0,0,0,0,0,1.15078454980324,0,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0,0.37898282354097,0.162964976442026,0.339490171550376,0.704070744865506,0.837531287209079,1.6663054862021,1.36593553500459,0.630540576424764,0.44292937929755,0.318909537314974,0,0.345369963731791,1.3018415272336,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,0.494910368917606,0,0.242780636154981,1.209294227859,0.943025398779491,0.295301892880773,0.614870295887855,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.656563598980245,5.53813589596716,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.406638934253697,0.972048067396211,0.836353184057875,2.83871332870031,1.48350781023303,1.73572257023205,3.14107130380836,23.4603101658145,5.59205381778233,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,2.62755465631655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.824140228955577,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.280924522409647,0.448176066834085,0.34461281373368,0,0.579421629724277,0,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.73171189149109,0.526139422875686,0.407412341537585,0,0.474540072496697,0.197008964751127,0.409231043169689,0.619747364743864,0.578719832943424,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.231867835620421|short_description=p1@Tmem171}} | ||
|EntrezGene=380863 | |||
|HGNC= | |||
|MCL_coexpression_id=195 | |||
|UniProt=Q4KL18 | |||
|association_with_transcript=0bp_to_ENSMUST00000064347,NM_001025606,uc007roy.1_5end | |||
|description=CAGE_peak_1_at_Tmem171_5end | |||
|id=chr13:99464780..99464802,- | |||
|ontology_enrichment_celltype=CL:0002563!1.17e-07!9;CL:0002251!1.17e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.15e-13,9;CL:0002251,1.15e-13,9;CL:0000239,4.54e-09,6;CL:0000677,4.54e-09,6;CL:0000584,4.54e-09,6;CL:0002076,4.61e-09,15;CL:0000066,2.99e-08,25;CL:0000075,1.15e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.76e-23!59;UBERON:0000160!5.41e-23!43;UBERON:0001007!1.81e-13!128;UBERON:0001555!1.81e-13!128;UBERON:0007026!1.81e-13!128;UBERON:0004119!2.24e-13!130;UBERON:0000925!2.24e-13!130;UBERON:0006595!2.24e-13!130;UBERON:0000344!2.15e-12!15;UBERON:0004921!2.29e-12!126;UBERON:0004185!2.29e-12!126;UBERON:0001242!6.35e-11!13;UBERON:0000060!6.35e-11!13;UBERON:0001262!6.35e-11!13;UBERON:0004786!6.35e-11!13;UBERON:0003350!1.17e-07!9;UBERON:0004808!1.17e-07!9;UBERON:0001277!1.17e-07!9;UBERON:0000485!7.45e-07!11;UBERON:0004923!8.31e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.03e-41,31;UBERON:0005409,2.41e-37,47;UBERON:0000344,4.58e-23,15;UBERON:0001242,3.85e-20,13;UBERON:0001262,3.85e-20,13;UBERON:0004786,3.85e-20,13;UBERON:0001007,2.99e-17,116;UBERON:0001555,2.99e-17,116;UBERON:0007026,2.99e-17,116;UBERON:0004119,8.92e-17,118;UBERON:0000925,8.92e-17,118;UBERON:0006595,8.92e-17,118;UBERON:0004921,2.02e-15,114;UBERON:0003350,1.15e-13,9;UBERON:0004808,1.15e-13,9;UBERON:0001277,1.15e-13,9;UBERON:0004923,6.53e-13,24;UBERON:0000485,7.73e-11,11;UBERON:0002108,8.94e-08,4 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,6.35174843744343,1.00179145989269,1.84667199103079,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,3.35984087866154,3.44113921600755,2.29692785646008,2.15380998079537,4.95583835177545,7.22088993934221,3.78045194639896,4.21287970245079,0,0,0,4.33277429626912,4.3221007793208,6.32925004413344,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,1.7127581957859,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,18.6391761218122,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.729619285912702,0.438599962275997,1.3173006917463,0.805238512562231,0,0,10.9038198384653,2.90895623329899,0,0.464473343720877,0.644337306610467,3.02525286935014,5.55945109612176,7.41879941838981,6.16887780007865,6.58795818896044,5.27803938480566,12.9321706826748,6.82374304916921,4.49409704327111,9.94235029423593,10.5544874824815,0,0,0,0.610953983535943,0.969762435838129,1.05203729835478,1.7706230394792,2.36176236767363,1.41298855057237,2.71473760627961,0,0,0,0,0,0,0,1.15078454980324,0,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0,0.37898282354097,0.162964976442026,0.339490171550376,0.704070744865506,0.837531287209079,1.6663054862021,1.36593553500459,0.630540576424764,0.44292937929755,0.318909537314974,0,0.345369963731791,1.3018415272336,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,0.494910368917606,0,0.242780636154981,1.209294227859,0.943025398779491,0.295301892880773,0.614870295887855,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.656563598980245,5.53813589596716,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.406638934253697,0.972048067396211,0.836353184057875,2.83871332870031,1.48350781023303,1.73572257023205,3.14107130380836,23.4603101658145,5.59205381778233,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,2.62755465631655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.824140228955577,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.280924522409647,0.448176066834085,0.34461281373368,0,0.579421629724277,0,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.73171189149109,0.526139422875686,0.407412341537585,0,0.474540072496697,0.197008964751127,0.409231043169689,0.619747364743864,0.578719832943424,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Tmem171 | |||
}} |
Revision as of 01:23, 13 September 2013
Short description: | p1@Tmem171 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem171_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | 0bp_to_ENSMUST00000064347, NM_001025606, uc007roy.1_5end |
EntrezGene: | Tmem171 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.15e-13 | 9 |
epithelial cell of alimentary canal | 1.15e-13 | 9 |
brush border epithelial cell | 4.54e-09 | 6 |
gut absorptive cell | 4.54e-09 | 6 |
enterocyte | 4.54e-09 | 6 |
endo-epithelial cell | 4.61e-09 | 15 |
epithelial cell | 2.99e-08 | 25 |
columnar/cuboidal epithelial cell | 1.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.03e-41 | 31 |
gastrointestinal system | 2.41e-37 | 47 |
mucosa | 4.58e-23 | 15 |
intestinal mucosa | 3.85e-20 | 13 |
wall of intestine | 3.85e-20 | 13 |
gastrointestinal system mucosa | 3.85e-20 | 13 |
digestive system | 2.99e-17 | 116 |
digestive tract | 2.99e-17 | 116 |
primitive gut | 2.99e-17 | 116 |
endoderm-derived structure | 8.92e-17 | 118 |
endoderm | 8.92e-17 | 118 |
presumptive endoderm | 8.92e-17 | 118 |
subdivision of digestive tract | 2.02e-15 | 114 |
epithelium of mucosa | 1.15e-13 | 9 |
gastrointestinal system epithelium | 1.15e-13 | 9 |
intestinal epithelium | 1.15e-13 | 9 |
organ component layer | 6.53e-13 | 24 |
simple columnar epithelium | 7.73e-11 | 11 |
small intestine | 8.94e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.