FFCP PHASE1:Mm9::chr14:122679237..122679247,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=64|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:122679237..122679247,+|id=chr14:122679237..122679247,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000764,4.56e-11,3;CL:0000765,4.56e-11,3;CL:0000038,4.56e-11,3;CL:0000547,4.56e-11,3;CL:0002610,5.71e-11,3;CL:0002614,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,4.56e-11,3;DOID:0060083,4.56e-11,3;DOID:1240,4.56e-11,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004684,5.71e-11,3;UBERON:0002275,5.71e-11,3;UBERON:0002038,7.15e-11,3;UBERON:0009663,7.15e-11,3;UBERON:0009661,7.15e-11,3;UBERON:0000125,7.15e-11,3;UBERON:0002308,7.15e-11,3;UBERON:0002950,1.73e-08,4;UBERON:0001891,1.73e-08,4;UBERON:0009616,1.73e-08,4;UBERON:0010286,1.73e-08,4|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,253.570689624702,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,2.20231761998777,0.127687338085188,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,0.075726193333184,0,0,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:122679237..122679247,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:122679237..122679247,+ | |||
|id=chr14:122679237..122679247,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.56e-11,3;CL:0000765,4.56e-11,3;CL:0000038,4.56e-11,3;CL:0000547,4.56e-11,3;CL:0002610,5.71e-11,3;CL:0002614,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.56e-11,3;DOID:0060083,4.56e-11,3;DOID:1240,4.56e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,5.71e-11,3;UBERON:0002275,5.71e-11,3;UBERON:0002038,7.15e-11,3;UBERON:0009663,7.15e-11,3;UBERON:0009661,7.15e-11,3;UBERON:0000125,7.15e-11,3;UBERON:0002308,7.15e-11,3;UBERON:0002950,1.73e-08,4;UBERON:0001891,1.73e-08,4;UBERON:0009616,1.73e-08,4;UBERON:0010286,1.73e-08,4 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,253.570689624702,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,2.20231761998777,0.127687338085188,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,0.075726193333184,0,0,0,0,0.539703191637817,0,0.448026887097336,0,0,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:122679237..122679247,+ | |||
}} |
Revision as of 01:37, 13 September 2013
Short description: | p@chr14:122679237..122679247, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:122679237..122679247, + |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.56e-11 | 3 |
erythroblast | 4.56e-11 | 3 |
erythroid progenitor cell | 4.56e-11 | 3 |
proerythroblast | 4.56e-11 | 3 |
raphe nuclei neuron | 5.71e-11 | 3 |
neuron of the substantia nigra | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 5.71e-11 | 3 |
reticular formation | 5.71e-11 | 3 |
substantia nigra | 7.15e-11 | 3 |
telencephalic nucleus | 7.15e-11 | 3 |
midbrain nucleus | 7.15e-11 | 3 |
neural nucleus | 7.15e-11 | 3 |
nucleus of brain | 7.15e-11 | 3 |
regional part of midbrain | 1.73e-08 | 4 |
midbrain | 1.73e-08 | 4 |
presumptive midbrain | 1.73e-08 | 4 |
midbrain neural tube | 1.73e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.56e-11 | 3 |
immune system cancer | 4.56e-11 | 3 |
leukemia | 4.56e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.