FFCP PHASE1:Hg19::chr4:110723194..110723197,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3426|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5394|TSSclassifier=S|UniProt=F5H1M0|association_with_transcript=0bp_to_ENST00000540104_5end|coexpression_cluster_id=C5|description=CAGE_peak_6_at_CFI_5end|id=chr4:110723194..110723197,-|ontology_enrichment_celltype=CL:0000181!1.15e-10!12;CL:0000417!1.15e-10!12;CL:0000668!1.15e-10!12;CL:0000414!1.15e-10!12;CL:0000412!1.15e-10!12;CL:0000182!1.15e-10!12|ontology_enrichment_celltype_v019=CL:0000064;3.61e-21;3!CL:0000067;3.61e-21;3!CL:0005012;3.61e-21;3!CL:0002304;3.61e-21;3!CL:0000182;5.88e-20;12!CL:0000306;1.52e-15;4!CL:0002222;1.52e-15;4!CL:0002224;1.52e-15;4!CL:0000746;5.48e-10;3!CL:0000075;1.75e-08;27!CL:0000342;3.33e-08;1!CL:0002565;3.33e-08;1!CL:0000511;8.12e-08;1!CL:0002625;8.12e-08;1!CL:0002174;8.12e-08;1!CL:0000216;8.12e-08;1!CL:0000501;8.12e-08;1!CL:0000737;1.07e-07;4|ontology_enrichment_celltype_v019_2=CL:0000064,3.87e-21,3;CL:0000067,3.87e-21,3;CL:0005012,3.87e-21,3;CL:0002304,3.87e-21,3;CL:0000182,4.16e-20,12;CL:0000306,1.69e-15,4;CL:0002222,1.69e-15,4;CL:0002224,1.69e-15,4;CL:0000746,6.87e-10,3;CL:0000513,6.87e-10,3;CL:0000075,1.82e-08,27;CL:0000342,3.34e-08,1;CL:0002565,3.34e-08,1;CL:0000511,6.63e-08,1;CL:0002625,6.63e-08,1;CL:0000216,6.63e-08,1;CL:0002174,8.69e-08,1;CL:0000501,8.69e-08,1;CL:0000737,1.26e-07,4|ontology_enrichment_development_v019=UBERON:0004161;5.63e-15;11!UBERON:0009497;1.20e-12;13!CL:0000513;5.48e-10;3!UBERON:0003104;2.64e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.50e-15!19;UBERON:0006925!2.50e-15!19;UBERON:0008836!2.50e-15!19;UBERON:0005057!4.60e-13!26;UBERON:0008835!1.12e-12!22;UBERON:0003894!1.12e-12!22;UBERON:0007499!2.15e-12!25;UBERON:0009497!3.29e-12!25;UBERON:0000015!3.29e-12!25;UBERON:0002423!3.29e-12!25;UBERON:0006235!3.29e-12!25;UBERON:0004161!3.29e-12!25;UBERON:0009854!5.99e-12!23;UBERON:0009856!9.47e-12!26;UBERON:0002368!1.81e-11!35;UBERON:0007625!3.36e-10!11;UBERON:0000949!5.34e-10!45;UBERON:0003929!9.69e-09!54;UBERON:0005172!9.74e-09!55;UBERON:0005173!9.74e-09!55;UBERON:0000488!2.01e-08!4;UBERON:0004921!3.15e-08!129;UBERON:0004185!3.15e-08!129;UBERON:0000481!5.45e-08!347;UBERON:0002365!7.11e-08!31;UBERON:0002330!7.11e-08!31;UBERON:0002530!9.47e-08!59;UBERON:0005177!1.45e-07!107;UBERON:0001048!2.28e-07!168;UBERON:0000970!2.48e-07!20;UBERON:0002417!2.54e-07!61;UBERON:0000916!2.54e-07!61;UBERON:0002104!7.24e-07!21;UBERON:0000119!9.84e-07!312|ontology_enrichment_uberon_v019=UBERON:0007625;3.09e-29;11!UBERON:0000488;1.28e-27;4!UBERON:0001801;8.26e-23;14!UBERON:0002107;9.00e-22;19!UBERON:0006925;9.00e-22;19!UBERON:0001778;3.61e-21;3!UBERON:0001775;3.61e-21;3!UBERON:0002203;1.70e-18;6!UBERON:0001768;1.70e-18;6!UBERON:0002200;1.70e-18;6!UBERON:0000019;1.35e-16;19!UBERON:0000047;1.35e-16;19!UBERON:0004088;1.35e-16;19!UBERON:0010230;1.35e-16;19!UBERON:0002423;2.81e-16;25!UBERON:0000970;9.99e-16;20!UBERON:0010077;1.52e-15;4!UBERON:0005389;1.52e-15;4!UBERON:0000484;1.52e-15;4!UBERON:0000965;1.52e-15;4!UBERON:0001803;1.52e-15;4!UBERON:0002104;6.13e-15;21!UBERON:0001456;6.13e-15;21!UBERON:0000020;1.44e-13;23!UBERON:0001032;5.73e-13;24!UBERON:0004456;5.73e-13;24!UBERON:0002365;1.84e-12;31!UBERON:0002330;1.84e-12;31!UBERON:0002368;5.45e-11;33!UBERON:0006876;3.67e-10;11!UBERON:0010371;1.10e-09;31!UBERON:0002506;3.33e-08;1!UBERON:0001769;3.33e-08;1!UBERON:0000949;4.08e-08;43!UBERON:0001136;8.12e-08;1!UBERON:0001343;8.12e-08;1!UBERON:0004910;8.12e-08;1!UBERON:0004813;8.12e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.51e-29,11;UBERON:0000488,1.37e-27,4;UBERON:0001801,9.14e-23,14;UBERON:0002107,6.73e-22,19;UBERON:0006925,6.73e-22,19;UBERON:0008836,6.73e-22,19;UBERON:0001778,3.87e-21,3;UBERON:0001775,3.87e-21,3;UBERON:0008835,9.27e-19,22;UBERON:0003894,9.27e-19,22;UBERON:0002203,1.78e-18,6;UBERON:0001768,1.78e-18,6;UBERON:0002200,1.78e-18,6;UBERON:0009854,6.79e-18,23;UBERON:0007499,2.26e-16,25;UBERON:0009497,2.26e-16,25;UBERON:0000015,2.26e-16,25;UBERON:0002423,2.26e-16,25;UBERON:0006235,2.26e-16,25;UBERON:0004161,2.26e-16,25;UBERON:0009856,1.07e-15,26;UBERON:0000019,1.07e-15,20;UBERON:0000047,1.07e-15,20;UBERON:0010312,1.07e-15,20;UBERON:0004088,1.07e-15,20;UBERON:0010230,1.07e-15,20;UBERON:0003072,1.07e-15,20;UBERON:0004128,1.07e-15,20;UBERON:0003071,1.07e-15,20;UBERON:0010077,1.69e-15,4;UBERON:0005389,1.69e-15,4;UBERON:0000484,1.69e-15,4;UBERON:0002546,1.69e-15,4;UBERON:0000965,1.69e-15,4;UBERON:0001803,1.69e-15,4;UBERON:0003073,1.69e-15,4;UBERON:0005426,1.69e-15,4;UBERON:0000970,6.54e-15,21;UBERON:0002104,6.54e-15,21;UBERON:0001456,3.40e-14,22;UBERON:0002365,5.56e-13,31;UBERON:0002330,5.56e-13,31;UBERON:0000020,6.06e-13,24;UBERON:0001032,6.06e-13,24;UBERON:0004456,6.06e-13,24;UBERON:0002368,2.29e-11,35;UBERON:0006876,3.76e-10,11;UBERON:0001048,4.54e-10,160;UBERON:0005085,7.85e-10,31;UBERON:0005172,8.08e-09,54;UBERON:0005173,8.08e-09,54;UBERON:0000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3426 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5394 | |||
|TSSclassifier=S | |||
|UniProt=F5H1M0 | |||
|association_with_transcript=0bp_to_ENST00000540104_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_CFI_5end | |||
|id=chr4:110723194..110723197,- | |||
|ontology_enrichment_celltype=CL:0000181!1.15e-10!12;CL:0000417!1.15e-10!12;CL:0000668!1.15e-10!12;CL:0000414!1.15e-10!12;CL:0000412!1.15e-10!12;CL:0000182!1.15e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.61e-21;3!CL:0000067;3.61e-21;3!CL:0005012;3.61e-21;3!CL:0002304;3.61e-21;3!CL:0000182;5.88e-20;12!CL:0000306;1.52e-15;4!CL:0002222;1.52e-15;4!CL:0002224;1.52e-15;4!CL:0000746;5.48e-10;3!CL:0000075;1.75e-08;27!CL:0000342;3.33e-08;1!CL:0002565;3.33e-08;1!CL:0000511;8.12e-08;1!CL:0002625;8.12e-08;1!CL:0002174;8.12e-08;1!CL:0000216;8.12e-08;1!CL:0000501;8.12e-08;1!CL:0000737;1.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.87e-21,3;CL:0000067,3.87e-21,3;CL:0005012,3.87e-21,3;CL:0002304,3.87e-21,3;CL:0000182,4.16e-20,12;CL:0000306,1.69e-15,4;CL:0002222,1.69e-15,4;CL:0002224,1.69e-15,4;CL:0000746,6.87e-10,3;CL:0000513,6.87e-10,3;CL:0000075,1.82e-08,27;CL:0000342,3.34e-08,1;CL:0002565,3.34e-08,1;CL:0000511,6.63e-08,1;CL:0002625,6.63e-08,1;CL:0000216,6.63e-08,1;CL:0002174,8.69e-08,1;CL:0000501,8.69e-08,1;CL:0000737,1.26e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.63e-15;11!UBERON:0009497;1.20e-12;13!CL:0000513;5.48e-10;3!UBERON:0003104;2.64e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.50e-15!19;UBERON:0006925!2.50e-15!19;UBERON:0008836!2.50e-15!19;UBERON:0005057!4.60e-13!26;UBERON:0008835!1.12e-12!22;UBERON:0003894!1.12e-12!22;UBERON:0007499!2.15e-12!25;UBERON:0009497!3.29e-12!25;UBERON:0000015!3.29e-12!25;UBERON:0002423!3.29e-12!25;UBERON:0006235!3.29e-12!25;UBERON:0004161!3.29e-12!25;UBERON:0009854!5.99e-12!23;UBERON:0009856!9.47e-12!26;UBERON:0002368!1.81e-11!35;UBERON:0007625!3.36e-10!11;UBERON:0000949!5.34e-10!45;UBERON:0003929!9.69e-09!54;UBERON:0005172!9.74e-09!55;UBERON:0005173!9.74e-09!55;UBERON:0000488!2.01e-08!4;UBERON:0004921!3.15e-08!129;UBERON:0004185!3.15e-08!129;UBERON:0000481!5.45e-08!347;UBERON:0002365!7.11e-08!31;UBERON:0002330!7.11e-08!31;UBERON:0002530!9.47e-08!59;UBERON:0005177!1.45e-07!107;UBERON:0001048!2.28e-07!168;UBERON:0000970!2.48e-07!20;UBERON:0002417!2.54e-07!61;UBERON:0000916!2.54e-07!61;UBERON:0002104!7.24e-07!21;UBERON:0000119!9.84e-07!312 | |||
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|short_description=p6@CFI | |||
}} |
Revision as of 02:01, 13 September 2013
Short description: | p6@CFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CFI_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000540104_5end |
EntrezGene: | CFI |
HGNC: | 5394 |
UniProt: | F5H1M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.87e-21 | 3 |
ciliated epithelial cell | 3.87e-21 | 3 |
multi-ciliated epithelial cell | 3.87e-21 | 3 |
non-pigmented ciliary epithelial cell | 3.87e-21 | 3 |
hepatocyte | 4.16e-20 | 12 |
crystallin accumulating cell | 1.69e-15 | 4 |
vertebrate lens cell | 1.69e-15 | 4 |
lens epithelial cell | 1.69e-15 | 4 |
cardiac muscle cell | 6.87e-10 | 3 |
cardiac muscle myoblast | 6.87e-10 | 3 |
columnar/cuboidal epithelial cell | 1.82e-08 | 27 |
pigment cell (sensu Vertebrata) | 3.34e-08 | 1 |
iris pigment epithelial cell | 3.34e-08 | 1 |
androgen binding protein secreting cell | 6.63e-08 | 1 |
seminiferous tubule epithelial cell | 6.63e-08 | 1 |
Sertoli cell | 6.63e-08 | 1 |
follicular cell of ovary | 8.69e-08 | 1 |
granulosa cell | 8.69e-08 | 1 |
striated muscle cell | 1.26e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.