FFCP PHASE1:Mm9::chr14:66456275..66456278,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67179|HGNC=|MCL_coexpression_id=64|UniProt=Q78PG9,A0PK78|association_with_transcript=136bp_to_ENSMUST00000022614,NM_145944,uc007ujq.1_5end|description=CAGE_peak_3_at_Ccdc25_5end|id=chr14:66456275..66456278,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,6.81e-12,6;CL:0000677,6.81e-12,6;CL:0000584,6.81e-12,6;CL:0000066,5.82e-11,25;CL:0000075,3.81e-10,7;CL:0002076,3.59e-08,15;CL:0000682,3.69e-08,3;CL:0002563,8.22e-08,9;CL:0002251,8.22e-08,9;CL:0000223,1.23e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003101!4.83e-07!16;UBERON:0000079!4.83e-07!16;UBERON:0000344!7.67e-07!15;UBERON:0000991!8.38e-07!18;UBERON:0005564!8.38e-07!18;UBERON:0003135!9.08e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.24e-13,15;UBERON:0001242,6.32e-10,13;UBERON:0001262,6.32e-10,13;UBERON:0004786,6.32e-10,13;UBERON:0003135,1.34e-08,15;UBERON:0003101,5.35e-08,16;UBERON:0000079,5.35e-08,16;UBERON:0004923,6.38e-08,24;UBERON:0003350,8.22e-08,9;UBERON:0004808,8.22e-08,9;UBERON:0001277,8.22e-08,9;UBERON:0000473,8.69e-07,14|phase1_expression=0.320297694209588,2.09385244583617,1.81999695755814,1.20985684522732,2.00358291978539,0.671517087647559,1.63528848416868,0.387369970324729,1.68946466582,1.63845168425395,0.513653904676515,0.0797721589953364,0,0.437102012094987,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,1.43993180514066,1.14704640533585,1.14846392823004,1.29228598847722,1.07735616342945,0.950117097281869,1.51218077855958,0.221730510655305,0.635030673459631,0,15.8481681015439,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0.186399445825301,0,0.151143120213571,1.44932244350839,0,0.679971333707751,0.539703191637817,0,0,0.280888840263504,0.170430322578058,0,0,0.704217098883403,1.28326477414318,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0.599902730993408,0.254140454146129,0.299581278809645,0.457500602818626,0,0.695297280769106,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,1.49288364732112,4.29628689337247,1.68353484709179,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0.540186184383045,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.411618449517138,1.65209391491899,0.793351699990633,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.864552199498777,0.995706366271836,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.505157755894224,1.07638448113147,0.482443521363367,0.369506380333209,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0,0.327869890753351,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0,0,0.425820255624806,0.35613120733451,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.42366414172764,0.441056796109924,0.8244312647074,0.161464426695906,0.422190474497091,0.119372344003136,0.164140899745061,0.874442509889552,0.556275906031529,0,0,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0.158167996790568,0.406638934253697,0.324016022465404,1.25452977608681,0.218362563746178,0.404593039154462,0.909188012978695,0,0.129614973291793,0,3.94585057078933,0.299033092087958,0.827292452285488,0.777804753376191,0.258319646955462,0.844780627453891,0.704143431874524,1.17183946359555,2.51662426621706,3.38217769156408,1.15212002503146,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0,0.302899349844443,0.304827226619999,0.302478555410522,0.194915761479505,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.375364950902364,0,0.428736758158132,0,1.6942555278512,1.38097570952153,1.71868654031819,0.859265911718438,0.685082519770642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| ||
|EntrezGene=67179 | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=Q78PG9,A0PK78 | |||
|association_with_transcript=136bp_to_ENSMUST00000022614,NM_145944,uc007ujq.1_5end | |||
|description=CAGE_peak_3_at_Ccdc25_5end | |||
|id=chr14:66456275..66456278,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.81e-12,6;CL:0000677,6.81e-12,6;CL:0000584,6.81e-12,6;CL:0000066,5.82e-11,25;CL:0000075,3.81e-10,7;CL:0002076,3.59e-08,15;CL:0000682,3.69e-08,3;CL:0002563,8.22e-08,9;CL:0002251,8.22e-08,9;CL:0000223,1.23e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!4.83e-07!16;UBERON:0000079!4.83e-07!16;UBERON:0000344!7.67e-07!15;UBERON:0000991!8.38e-07!18;UBERON:0005564!8.38e-07!18;UBERON:0003135!9.08e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.24e-13,15;UBERON:0001242,6.32e-10,13;UBERON:0001262,6.32e-10,13;UBERON:0004786,6.32e-10,13;UBERON:0003135,1.34e-08,15;UBERON:0003101,5.35e-08,16;UBERON:0000079,5.35e-08,16;UBERON:0004923,6.38e-08,24;UBERON:0003350,8.22e-08,9;UBERON:0004808,8.22e-08,9;UBERON:0001277,8.22e-08,9;UBERON:0000473,8.69e-07,14 | |||
|phase1_expression=0.320297694209588,2.09385244583617,1.81999695755814,1.20985684522732,2.00358291978539,0.671517087647559,1.63528848416868,0.387369970324729,1.68946466582,1.63845168425395,0.513653904676515,0.0797721589953364,0,0.437102012094987,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,1.43993180514066,1.14704640533585,1.14846392823004,1.29228598847722,1.07735616342945,0.950117097281869,1.51218077855958,0.221730510655305,0.635030673459631,0,15.8481681015439,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0.186399445825301,0,0.151143120213571,1.44932244350839,0,0.679971333707751,0.539703191637817,0,0,0.280888840263504,0.170430322578058,0,0,0.704217098883403,1.28326477414318,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0.599902730993408,0.254140454146129,0.299581278809645,0.457500602818626,0,0.695297280769106,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,1.49288364732112,4.29628689337247,1.68353484709179,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0.540186184383045,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.411618449517138,1.65209391491899,0.793351699990633,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.864552199498777,0.995706366271836,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.505157755894224,1.07638448113147,0.482443521363367,0.369506380333209,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0,0.327869890753351,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0,0,0.425820255624806,0.35613120733451,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.42366414172764,0.441056796109924,0.8244312647074,0.161464426695906,0.422190474497091,0.119372344003136,0.164140899745061,0.874442509889552,0.556275906031529,0,0,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0.158167996790568,0.406638934253697,0.324016022465404,1.25452977608681,0.218362563746178,0.404593039154462,0.909188012978695,0,0.129614973291793,0,3.94585057078933,0.299033092087958,0.827292452285488,0.777804753376191,0.258319646955462,0.844780627453891,0.704143431874524,1.17183946359555,2.51662426621706,3.38217769156408,1.15212002503146,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0,0.302899349844443,0.304827226619999,0.302478555410522,0.194915761479505,0.0962118416403295,0,0,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.375364950902364,0,0.428736758158132,0,1.6942555278512,1.38097570952153,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,2.26571204492102,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.128050304809739,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p3@Ccdc25 | |||
}} |
Revision as of 02:48, 13 September 2013
Short description: | p3@Ccdc25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ccdc25_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 136bp_to_ENSMUST00000022614, NM_145944, uc007ujq.1_5end |
EntrezGene: | Ccdc25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.81e-12 | 6 |
gut absorptive cell | 6.81e-12 | 6 |
enterocyte | 6.81e-12 | 6 |
epithelial cell | 5.82e-11 | 25 |
columnar/cuboidal epithelial cell | 3.81e-10 | 7 |
endo-epithelial cell | 3.59e-08 | 15 |
M cell of gut | 3.69e-08 | 3 |
intestinal epithelial cell | 8.22e-08 | 9 |
epithelial cell of alimentary canal | 8.22e-08 | 9 |
endodermal cell | 1.23e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.24e-13 | 15 |
intestinal mucosa | 6.32e-10 | 13 |
wall of intestine | 6.32e-10 | 13 |
gastrointestinal system mucosa | 6.32e-10 | 13 |
male reproductive organ | 1.34e-08 | 15 |
male organism | 5.35e-08 | 16 |
male reproductive system | 5.35e-08 | 16 |
organ component layer | 6.38e-08 | 24 |
epithelium of mucosa | 8.22e-08 | 9 |
gastrointestinal system epithelium | 8.22e-08 | 9 |
intestinal epithelium | 8.22e-08 | 9 |
testis | 8.69e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.