FFCP PHASE1:Mm9::chr14:66593765..66593780,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=290|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:66593765..66593780,-|id=chr14:66593765..66593780,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,6.28e-09,3;CL:0002202,6.28e-09,3;CL:0000069,6.28e-09,3;CL:0002632,6.28e-09,3;CL:0002368,6.28e-09,3;CL:0000307,6.28e-09,3;CL:0000377,6.28e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!9.17e-13!79;UBERON:0000062!2.28e-12!269;UBERON:0003886!2.06e-08!38;UBERON:0005177!2.85e-08!85;UBERON:0002553!5.95e-08!39;UBERON:0000464!7.48e-08!57;UBERON:0002323!9.40e-08!37;UBERON:0004458!9.40e-08!37;UBERON:0002100!1.98e-07!98;UBERON:0000480!2.87e-07!308;UBERON:0000467!2.87e-07!308;UBERON:0003135!7.81e-07!15;UBERON:0001045!8.28e-07!13;UBERON:0000923!8.85e-07!314;UBERON:0005291!8.85e-07!314;UBERON:0006598!8.85e-07!314;UBERON:0002532!8.85e-07!314|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.14e-11,79;UBERON:0009854,1.59e-10,23;UBERON:0009856,1.59e-10,23;UBERON:0002107,4.33e-09,22;UBERON:0007499,4.33e-09,22;UBERON:0006925,4.33e-09,22;UBERON:0009497,4.33e-09,22;UBERON:0000015,4.33e-09,22;UBERON:0002423,4.33e-09,22;UBERON:0006235,4.33e-09,22;UBERON:0008835,4.33e-09,22;UBERON:0003894,4.33e-09,22;UBERON:0004161,4.33e-09,22;UBERON:0008836,4.33e-09,22;UBERON:0002100,6.00e-09,90;UBERON:0003126,6.28e-09,3;UBERON:0001005,6.28e-09,3;UBERON:0007196,6.28e-09,3;UBERON:0001558,6.28e-09,3;UBERON:0003886,6.91e-09,38;UBERON:0001264,8.29e-09,12;UBERON:0002553,1.40e-08,39;UBERON:0000058,1.73e-08,7;UBERON:0002365,9.21e-08,25;UBERON:0002330,9.21e-08,25;UBERON:0002323,1.16e-07,37;UBERON:0004458,1.16e-07,37|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,4.5881856213434,0,0.430761996159075,1.07735616342945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,1.30815093828268,1.09843091367236,1.74986909166855,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0.766124028511126,0.153606533256243,0,0,0,0.837548997004143,1.68828783009504,0.45839474333043,0,0,0,0,0,3.47837386442013,3.44169550792555,4.75979933595425,1.61910957491345,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,7.46470124816407,0,0,0,8.87613268145978,8.86759529162845,9.0994400102661,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0.299581278809645,0,0.125654352112864,1.04294592115366,0,0.83115217823824,0.648965052271031,0.101839363850316,1.11966273549084,9.60346482047964,0.420883711772948,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0.493679549740441,0,0,1.46199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,1.77871576252289,0,0,0,0,0.241177159752417,0,0,0.486405680325106,1.09824565275233,2.87536413054709,1.48856379067401,1.5601883655728,0.505157755894224,0.896987067609561,3.37710464954357,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0.983528546038072,0.551873492609465,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,3.98235415019888,0.728341908464944,1.209294227859,1.69744571780308,0,1.53717573971964,0.516856586336442,0,0.712994756769443,1.26414703174326,4.21674434299995,2.06271086496374,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,0.18542530201051,0,0,0,0.376736914009382,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.785267825952089,0,0,1.12738587736838,0,0.165458490457098,0.388902376688095,1.80823752868824,2.53434188236167,0.234714477291508,1.0416350787516,0.734015410979976,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,1.00314420807073,0.564751842617067,0.460325236507177,0,0.859265911718438,1.37016503954128,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr14:66593765..66593780,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=290 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:66593765..66593780,- | |||
|id=chr14:66593765..66593780,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.28e-09,3;CL:0002202,6.28e-09,3;CL:0000069,6.28e-09,3;CL:0002632,6.28e-09,3;CL:0002368,6.28e-09,3;CL:0000307,6.28e-09,3;CL:0000377,6.28e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!9.17e-13!79;UBERON:0000062!2.28e-12!269;UBERON:0003886!2.06e-08!38;UBERON:0005177!2.85e-08!85;UBERON:0002553!5.95e-08!39;UBERON:0000464!7.48e-08!57;UBERON:0002323!9.40e-08!37;UBERON:0004458!9.40e-08!37;UBERON:0002100!1.98e-07!98;UBERON:0000480!2.87e-07!308;UBERON:0000467!2.87e-07!308;UBERON:0003135!7.81e-07!15;UBERON:0001045!8.28e-07!13;UBERON:0000923!8.85e-07!314;UBERON:0005291!8.85e-07!314;UBERON:0006598!8.85e-07!314;UBERON:0002532!8.85e-07!314 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.14e-11,79;UBERON:0009854,1.59e-10,23;UBERON:0009856,1.59e-10,23;UBERON:0002107,4.33e-09,22;UBERON:0007499,4.33e-09,22;UBERON:0006925,4.33e-09,22;UBERON:0009497,4.33e-09,22;UBERON:0000015,4.33e-09,22;UBERON:0002423,4.33e-09,22;UBERON:0006235,4.33e-09,22;UBERON:0008835,4.33e-09,22;UBERON:0003894,4.33e-09,22;UBERON:0004161,4.33e-09,22;UBERON:0008836,4.33e-09,22;UBERON:0002100,6.00e-09,90;UBERON:0003126,6.28e-09,3;UBERON:0001005,6.28e-09,3;UBERON:0007196,6.28e-09,3;UBERON:0001558,6.28e-09,3;UBERON:0003886,6.91e-09,38;UBERON:0001264,8.29e-09,12;UBERON:0002553,1.40e-08,39;UBERON:0000058,1.73e-08,7;UBERON:0002365,9.21e-08,25;UBERON:0002330,9.21e-08,25;UBERON:0002323,1.16e-07,37;UBERON:0004458,1.16e-07,37 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,4.5881856213434,0,0.430761996159075,1.07735616342945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,1.30815093828268,1.09843091367236,1.74986909166855,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0.766124028511126,0.153606533256243,0,0,0,0.837548997004143,1.68828783009504,0.45839474333043,0,0,0,0,0,3.47837386442013,3.44169550792555,4.75979933595425,1.61910957491345,0.649776417447669,0,0.140444420131752,0.170430322578058,0,0,7.46470124816407,0,0,0,8.87613268145978,8.86759529162845,9.0994400102661,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0.299581278809645,0,0.125654352112864,1.04294592115366,0,0.83115217823824,0.648965052271031,0.101839363850316,1.11966273549084,9.60346482047964,0.420883711772948,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0.493679549740441,0,0,1.46199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,1.77871576252289,0,0,0,0,0.241177159752417,0,0,0.486405680325106,1.09824565275233,2.87536413054709,1.48856379067401,1.5601883655728,0.505157755894224,0.896987067609561,3.37710464954357,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0.983528546038072,0.551873492609465,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,3.98235415019888,0.728341908464944,1.209294227859,1.69744571780308,0,1.53717573971964,0.516856586336442,0,0.712994756769443,1.26414703174326,4.21674434299995,2.06271086496374,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,0.18542530201051,0,0,0,0.376736914009382,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.785267825952089,0,0,1.12738587736838,0,0.165458490457098,0.388902376688095,1.80823752868824,2.53434188236167,0.234714477291508,1.0416350787516,0.734015410979976,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,1.00314420807073,0.564751842617067,0.460325236507177,0,0.859265911718438,1.37016503954128,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr14:66593765..66593780,- | |||
}} |
Revision as of 02:49, 13 September 2013
Short description: | p@chr14:66593765..66593780, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66593765..66593780, - |
Coexpression cluster: | MCL_coexpression_mm9:290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.28e-09 | 3 |
epithelial cell of tracheobronchial tree | 6.28e-09 | 3 |
branched duct epithelial cell | 6.28e-09 | 3 |
epithelial cell of lower respiratory tract | 6.28e-09 | 3 |
respiratory epithelial cell | 6.28e-09 | 3 |
tracheal epithelial cell | 6.28e-09 | 3 |
tracheoblast | 6.28e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.14e-11 | 79 |
digestive tract diverticulum | 1.59e-10 | 23 |
sac | 1.59e-10 | 23 |
liver | 4.33e-09 | 22 |
epithelial sac | 4.33e-09 | 22 |
digestive gland | 4.33e-09 | 22 |
epithelium of foregut-midgut junction | 4.33e-09 | 22 |
anatomical boundary | 4.33e-09 | 22 |
hepatobiliary system | 4.33e-09 | 22 |
foregut-midgut junction | 4.33e-09 | 22 |
hepatic diverticulum | 4.33e-09 | 22 |
liver primordium | 4.33e-09 | 22 |
septum transversum | 4.33e-09 | 22 |
liver bud | 4.33e-09 | 22 |
trunk | 6.00e-09 | 90 |
trachea | 6.28e-09 | 3 |
respiratory airway | 6.28e-09 | 3 |
tracheobronchial tree | 6.28e-09 | 3 |
lower respiratory tract | 6.28e-09 | 3 |
body cavity precursor | 6.91e-09 | 38 |
pancreas | 8.29e-09 | 12 |
anatomical cavity | 1.40e-08 | 39 |
duct | 1.73e-08 | 7 |
exocrine gland | 9.21e-08 | 25 |
exocrine system | 9.21e-08 | 25 |
body cavity | 1.16e-07 | 37 |
body cavity or lining | 1.16e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.