FFCP PHASE1:Hg19::chr4:160149339..160149350,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9693|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16854|TSSclassifier=S|UniProt=|association_with_transcript=-55bp_to_ENST00000504604_5end|description=CAGE_peak_15_at_RAPGEF2_5end|id=chr4:160149339..160149350,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002535;2.12e-11;2!CL:0002504;6.78e-08;3!CL:1000279;6.78e-08;3!CL:0002592;6.78e-08;3!CL:1000280;6.78e-08;3|ontology_enrichment_celltype_v019_2=CL:0002535,2.23e-11,2;CL:0002592,5.54e-08,3;CL:0002504,5.93e-08,3;CL:1000279,5.93e-08,3;CL:1000280,5.93e-08,3|ontology_enrichment_development_v019=UBERON:0004140;1.53e-21;1!UBERON:0000358;2.08e-21;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.14e-09!9|ontology_enrichment_uberon_v019=UBERON:0006955;2.12e-11;2!UBERON:0004801;2.12e-11;2!UBERON:0003498;6.78e-08;3!UBERON:0005985;6.78e-08;3!UBERON:0001621;6.78e-08;3!UBERON:0002114;6.78e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.23e-11,2;UBERON:0004801,2.23e-11,2;UBERON:0001621,5.54e-08,3;UBERON:0002114,7.76e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,0.842923450390509,0.723033089650446,0.882351781859152,0.871517776369625,0.237270619111097,0.943819157121151,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.2933531432838,0.904902010304444,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.241718899183244,0.200506470303285,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,1.14851441245126,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,1.43897966066652,0,0.353437207037059,0,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.37428108081644,0,0.36408156524854,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0.613612095012929,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,0.23056390438806,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.848118428603645,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08942095792966,0,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0,0,0,0.274083849293502,0,0.189932387867636,0.782205530939212,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0.407712618220842,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,3.56072404179649,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0.813741466409323,0,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0,0,0,0.643324774124777,1.04397716786085,0.453411851024545,0,0.489473409012935,0.179088841081487,0,0,0.353378291891762,0.578742114812744,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0.159633859057151,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-55bp_to_ENST00000504604_5end | |||
|description=CAGE_peak_15_at_RAPGEF2_5end | |||
|id=chr4:160149339..160149350,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.12e-11;2!CL:0002504;6.78e-08;3!CL:1000279;6.78e-08;3!CL:0002592;6.78e-08;3!CL:1000280;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.23e-11,2;CL:0002592,5.54e-08,3;CL:0002504,5.93e-08,3;CL:1000279,5.93e-08,3;CL:1000280,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.53e-21;1!UBERON:0000358;2.08e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.14e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.12e-11;2!UBERON:0004801;2.12e-11;2!UBERON:0003498;6.78e-08;3!UBERON:0005985;6.78e-08;3!UBERON:0001621;6.78e-08;3!UBERON:0002114;6.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.23e-11,2;UBERON:0004801,2.23e-11,2;UBERON:0001621,5.54e-08,3;UBERON:0002114,7.76e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,0.842923450390509,0.723033089650446,0.882351781859152,0.871517776369625,0.237270619111097,0.943819157121151,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.2933531432838,0.904902010304444,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.241718899183244,0.200506470303285,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,1.14851441245126,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,1.43897966066652,0,0.353437207037059,0,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.37428108081644,0,0.36408156524854,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0.613612095012929,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,0.23056390438806,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.848118428603645,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08942095792966,0,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0,0,0,0.274083849293502,0,0.189932387867636,0.782205530939212,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0.407712618220842,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,3.56072404179649,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0.813741466409323,0,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0,0,0,0.643324774124777,1.04397716786085,0.453411851024545,0,0.489473409012935,0.179088841081487,0,0,0.353378291891762,0.578742114812744,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0.762764190934334,0,0,0,0,0,0.261906694481422,0.655087670040387,0,0,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0,0,0,0.620916591138472,0,0,0.339848664884159,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0.142953088353313,0,0,0.695433089210318,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0.951360726220549,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,0.580120991762195,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0.33639558774184,0.12729431655633,0,0,0,0,0,0.332660356546013,0,0.426909383510862,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p15@RAPGEF2 | |||
}} |
Revision as of 03:07, 13 September 2013
Short description: | p15@RAPGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_RAPGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_ENST00000504604_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.23e-11 | 2 |
smooth muscle cell of the coronary artery | 5.54e-08 | 3 |
enteric smooth muscle cell | 5.93e-08 | 3 |
smooth muscle cell of large intestine | 5.93e-08 | 3 |
smooth muscle cell of colon | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.23e-11 | 2 |
cervix epithelium | 2.23e-11 | 2 |
coronary artery | 5.54e-08 | 3 |
duodenum | 7.76e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.