FFCP PHASE1:Mm9::chr14:8826705..8826731,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13421|HGNC=|MCL_coexpression_id=259|UniProt=O55070|association_with_transcript=-9bp_to_NM_007870,uc007sem.1_5end|description=CAGE_peak_2_at_Dnase1l3_5end|id=chr14:8826705..8826731,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!1.13e-15!23;UBERON:0009856!1.13e-15!23;UBERON:0002365!3.45e-15!25;UBERON:0002330!3.45e-15!25;UBERON:0002107!3.50e-15!22;UBERON:0007499!3.50e-15!22;UBERON:0006925!3.50e-15!22;UBERON:0009497!3.50e-15!22;UBERON:0000015!3.50e-15!22;UBERON:0002423!3.50e-15!22;UBERON:0006235!3.50e-15!22;UBERON:0008835!3.50e-15!22;UBERON:0003894!3.50e-15!22;UBERON:0004161!3.50e-15!22;UBERON:0008836!3.50e-15!22;UBERON:0005057!1.63e-12!51;UBERON:0002405!5.98e-11!70;UBERON:0005172!7.04e-11!49;UBERON:0005173!7.04e-11!49;UBERON:0002417!7.04e-11!49;UBERON:0000916!7.04e-11!49;UBERON:0000077!1.78e-10!97;UBERON:0001041!1.35e-09!92;UBERON:0004119!1.52e-08!130;UBERON:0000925!1.52e-08!130;UBERON:0006595!1.52e-08!130;UBERON:0002368!7.12e-08!60;UBERON:0004921!7.38e-08!126;UBERON:0004185!7.38e-08!126;UBERON:0001007!9.98e-08!128;UBERON:0001555!9.98e-08!128;UBERON:0007026!9.98e-08!128;UBERON:0002530!1.22e-07!65;UBERON:0009569!3.04e-07!66;UBERON:0003929!7.87e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.94e-26,23;UBERON:0009856,1.94e-26,23;UBERON:0002107,1.35e-25,22;UBERON:0007499,1.35e-25,22;UBERON:0006925,1.35e-25,22;UBERON:0009497,1.35e-25,22;UBERON:0000015,1.35e-25,22;UBERON:0002423,1.35e-25,22;UBERON:0006235,1.35e-25,22;UBERON:0008835,1.35e-25,22;UBERON:0003894,1.35e-25,22;UBERON:0004161,1.35e-25,22;UBERON:0008836,1.35e-25,22;UBERON:0002365,1.20e-21,25;UBERON:0002330,1.20e-21,25;UBERON:0005172,1.11e-11,49;UBERON:0005173,1.11e-11,49;UBERON:0002417,1.11e-11,49;UBERON:0000916,1.11e-11,49;UBERON:0001041,1.11e-09,80;UBERON:0005256,5.18e-09,45;UBERON:0003929,2.02e-08,55;UBERON:0003914,2.30e-08,47;UBERON:0002368,3.67e-07,60;UBERON:0000014,4.61e-07,5;UBERON:0001003,4.61e-07,5;UBERON:0002097,4.61e-07,5;UBERON:0002199,4.61e-07,5;UBERON:0007029,4.61e-07,5;UBERON:0007376,4.61e-07,5;UBERON:0002416,4.61e-07,5;UBERON:0007383,4.61e-07,5;UBERON:0009569,8.20e-07,66|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0.999329285446988,0.809901069559304,0.699561878128147,8.67520954735154,7.95263714913285,5.09267582157636,0.17008658030214,0,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,490.450714883239,308.892171836318,0,4.31762553310254,18.8435161059824,10.3046184032387,15.870219474888,0.170430322578058,0,0,0,0,0,0,0,0,0,16.0999270403875,4.66088190564909,0.29688427812965,0,0.913396434936424,0.691846491768175,0.753613202763113,0.940709657085638,0.251333182659351,3.46072954828123,0.289198713839823,1.76922110389975,0,0,0.484875253135222,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0,0,0,0.360124259610698,0.90422890701429,0,0,0,0,0,0,0,0,1.66828349535359,5.57203466435466,8.64284972913362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,1.05780226665418,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0.502670417600539,0.397912944082302,0.779856348476481,0.898819408654221,0.864552199498777,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,63.4408621966499,1.33476084572875,2.75182593158484,2.24862112384854,3.65148218499305,7.95884627182976,10.6942857748196,14.9601991474422,19.2940919862292,31.8491239298175,48.8811902193005,64.3803839466511,82.6899833753586,67.9437181677731,70.8619783411553,53.5512308713338,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0,0.159454768657487,0.327726629431476,0.345369963731791,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,5.39744928546534,9.95610733059955,0,17.1481703059139,5.9741837877485,4.644095219468,5.37175548014114,6.40149509005739,0.582961673259701,0,3.07567585436135,0,0.925972636848558,1.50694765603753,2.05041341581538,3.66045077130436,0,0,0,0.954670618015114,0,0,0.86404272657441,0.209088296014469,1.9652630737156,4.85511646985355,6.52962300230154,3.40282724579238,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0.810900861160657,0.924398614483445,0.77952493786677,0.537080087002444,2.18549490259391,0.841368146639782,1.03382669022204,1.00966449948148,0.609654453239999,0.907435666231565,0.584747284438515,0.481059208201647,0.467507608726276,2.49403421976732,0.443971906748129,0.269141569828427,0.671538465456314,0.193189594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| ||
|EntrezGene=13421 | |||
|HGNC= | |||
|MCL_coexpression_id=259 | |||
|UniProt=O55070 | |||
|association_with_transcript=-9bp_to_NM_007870,uc007sem.1_5end | |||
|description=CAGE_peak_2_at_Dnase1l3_5end | |||
|id=chr14:8826705..8826731,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.13e-15!23;UBERON:0009856!1.13e-15!23;UBERON:0002365!3.45e-15!25;UBERON:0002330!3.45e-15!25;UBERON:0002107!3.50e-15!22;UBERON:0007499!3.50e-15!22;UBERON:0006925!3.50e-15!22;UBERON:0009497!3.50e-15!22;UBERON:0000015!3.50e-15!22;UBERON:0002423!3.50e-15!22;UBERON:0006235!3.50e-15!22;UBERON:0008835!3.50e-15!22;UBERON:0003894!3.50e-15!22;UBERON:0004161!3.50e-15!22;UBERON:0008836!3.50e-15!22;UBERON:0005057!1.63e-12!51;UBERON:0002405!5.98e-11!70;UBERON:0005172!7.04e-11!49;UBERON:0005173!7.04e-11!49;UBERON:0002417!7.04e-11!49;UBERON:0000916!7.04e-11!49;UBERON:0000077!1.78e-10!97;UBERON:0001041!1.35e-09!92;UBERON:0004119!1.52e-08!130;UBERON:0000925!1.52e-08!130;UBERON:0006595!1.52e-08!130;UBERON:0002368!7.12e-08!60;UBERON:0004921!7.38e-08!126;UBERON:0004185!7.38e-08!126;UBERON:0001007!9.98e-08!128;UBERON:0001555!9.98e-08!128;UBERON:0007026!9.98e-08!128;UBERON:0002530!1.22e-07!65;UBERON:0009569!3.04e-07!66;UBERON:0003929!7.87e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.94e-26,23;UBERON:0009856,1.94e-26,23;UBERON:0002107,1.35e-25,22;UBERON:0007499,1.35e-25,22;UBERON:0006925,1.35e-25,22;UBERON:0009497,1.35e-25,22;UBERON:0000015,1.35e-25,22;UBERON:0002423,1.35e-25,22;UBERON:0006235,1.35e-25,22;UBERON:0008835,1.35e-25,22;UBERON:0003894,1.35e-25,22;UBERON:0004161,1.35e-25,22;UBERON:0008836,1.35e-25,22;UBERON:0002365,1.20e-21,25;UBERON:0002330,1.20e-21,25;UBERON:0005172,1.11e-11,49;UBERON:0005173,1.11e-11,49;UBERON:0002417,1.11e-11,49;UBERON:0000916,1.11e-11,49;UBERON:0001041,1.11e-09,80;UBERON:0005256,5.18e-09,45;UBERON:0003929,2.02e-08,55;UBERON:0003914,2.30e-08,47;UBERON:0002368,3.67e-07,60;UBERON:0000014,4.61e-07,5;UBERON:0001003,4.61e-07,5;UBERON:0002097,4.61e-07,5;UBERON:0002199,4.61e-07,5;UBERON:0007029,4.61e-07,5;UBERON:0007376,4.61e-07,5;UBERON:0002416,4.61e-07,5;UBERON:0007383,4.61e-07,5;UBERON:0009569,8.20e-07,66 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0.999329285446988,0.809901069559304,0.699561878128147,8.67520954735154,7.95263714913285,5.09267582157636,0.17008658030214,0,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,490.450714883239,308.892171836318,0,4.31762553310254,18.8435161059824,10.3046184032387,15.870219474888,0.170430322578058,0,0,0,0,0,0,0,0,0,16.0999270403875,4.66088190564909,0.29688427812965,0,0.913396434936424,0.691846491768175,0.753613202763113,0.940709657085638,0.251333182659351,3.46072954828123,0.289198713839823,1.76922110389975,0,0,0.484875253135222,1.86391761218122,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0,0,0,0.360124259610698,0.90422890701429,0,0,0,0,0,0,0,0,1.66828349535359,5.57203466435466,8.64284972913362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,1.05780226665418,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0.502670417600539,0.397912944082302,0.779856348476481,0.898819408654221,0.864552199498777,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,63.4408621966499,1.33476084572875,2.75182593158484,2.24862112384854,3.65148218499305,7.95884627182976,10.6942857748196,14.9601991474422,19.2940919862292,31.8491239298175,48.8811902193005,64.3803839466511,82.6899833753586,67.9437181677731,70.8619783411553,53.5512308713338,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0,0.159454768657487,0.327726629431476,0.345369963731791,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,5.39744928546534,9.95610733059955,0,17.1481703059139,5.9741837877485,4.644095219468,5.37175548014114,6.40149509005739,0.582961673259701,0,3.07567585436135,0,0.925972636848558,1.50694765603753,2.05041341581538,3.66045077130436,0,0,0,0.954670618015114,0,0,0.86404272657441,0.209088296014469,1.9652630737156,4.85511646985355,6.52962300230154,3.40282724579238,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0.810900861160657,0.924398614483445,0.77952493786677,0.537080087002444,2.18549490259391,0.841368146639782,1.03382669022204,1.00966449948148,0.609654453239999,0.907435666231565,0.584747284438515,0.481059208201647,0.467507608726276,2.49403421976732,0.443971906748129,0.269141569828427,0.671538465456314,0.19318959403219,0.187682475451182,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.972426868273176,1.25767897576789,0.183843508450014,1.55572709461131,0,0.320919209591815,1.51618327058278,1.01391719956096,1.13175804831646,1.49826411951812,1.72867911493147,0.918967503289812,0.952587382566147,1.39061191133827,1.15745532278223,2.06042950401653,1.03039244094078,0.685738504770831,0.532427418478012,0.953744759789284,0.872078499793971,0.846984423737976,1.18460451048347,0.73171189149109,1.57841826862706,1.22223702461276,0,0.711810108745045,0.492522411877817,0.818462086339379,0.929621047115796,1.35034627686799,1.99848462350357,3.04111090979031,3.43793686477277,0.765153328275374,1.32354851471709,1.15933917810211 | |||
|short_description=p2@Dnase1l3 | |||
}} |
Revision as of 03:13, 13 September 2013
Short description: | p2@Dnase1l3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dnase1l3_5end |
Coexpression cluster: | MCL_coexpression_mm9:259 |
Association with transcript: | -9bp_to_NM_007870, uc007sem.1_5end |
EntrezGene: | Dnase1l3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.94e-26 | 23 |
sac | 1.94e-26 | 23 |
liver | 1.35e-25 | 22 |
epithelial sac | 1.35e-25 | 22 |
digestive gland | 1.35e-25 | 22 |
epithelium of foregut-midgut junction | 1.35e-25 | 22 |
anatomical boundary | 1.35e-25 | 22 |
hepatobiliary system | 1.35e-25 | 22 |
foregut-midgut junction | 1.35e-25 | 22 |
hepatic diverticulum | 1.35e-25 | 22 |
liver primordium | 1.35e-25 | 22 |
septum transversum | 1.35e-25 | 22 |
liver bud | 1.35e-25 | 22 |
exocrine gland | 1.20e-21 | 25 |
exocrine system | 1.20e-21 | 25 |
abdomen element | 1.11e-11 | 49 |
abdominal segment element | 1.11e-11 | 49 |
abdominal segment of trunk | 1.11e-11 | 49 |
abdomen | 1.11e-11 | 49 |
foregut | 1.11e-09 | 80 |
trunk mesenchyme | 5.18e-09 | 45 |
gut epithelium | 2.02e-08 | 55 |
epithelial tube | 2.30e-08 | 47 |
endocrine gland | 3.67e-07 | 60 |
zone of skin | 4.61e-07 | 5 |
skin epidermis | 4.61e-07 | 5 |
skin of body | 4.61e-07 | 5 |
integument | 4.61e-07 | 5 |
surface | 4.61e-07 | 5 |
outer epithelium | 4.61e-07 | 5 |
integumental system | 4.61e-07 | 5 |
enveloping layer of ectoderm | 4.61e-07 | 5 |
subdivision of trunk | 8.20e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.