FFCP PHASE1:Mm9::chr15:101829917..101829924,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=358|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:101829917..101829924,+|id=chr15:101829917..101829924,+|ontology_enrichment_celltype=CL:0002076!3.53e-20!15;CL:0000239!4.83e-20!6;CL:0000677!4.83e-20!6;CL:0000212!4.83e-20!6;CL:0000584!4.83e-20!6;CL:0000223!8.88e-19!20;CL:0000066!2.79e-18!25;CL:0000075!3.55e-17!7;CL:0000068!4.62e-16!3;CL:0002202!4.62e-16!3;CL:0000069!4.62e-16!3;CL:0002632!4.62e-16!3;CL:0002368!4.62e-16!3;CL:0000307!4.62e-16!3;CL:0000377!4.62e-16!3;CL:0000349!5.59e-15!3;CL:0000351!5.59e-15!3;CL:0002563!2.40e-13!9;CL:0002251!2.40e-13!9|ontology_enrichment_celltype_v019_2=CL:0000068,5.97e-33,3;CL:0002202,5.97e-33,3;CL:0000069,5.97e-33,3;CL:0002632,5.97e-33,3;CL:0002368,5.97e-33,3;CL:0000307,5.97e-33,3;CL:0000377,5.97e-33,3;CL:0002076,3.73e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.98e-32!15;UBERON:0001242!2.89e-23!13;UBERON:0000060!2.89e-23!13;UBERON:0001262!2.89e-23!13;UBERON:0004786!2.89e-23!13;UBERON:0004923!2.12e-19!24;UBERON:0003126!4.62e-16!3;UBERON:0001005!4.62e-16!3;UBERON:0007196!4.62e-16!3;UBERON:0001558!4.62e-16!3;UBERON:0000331!8.21e-16!3;UBERON:0002116!8.21e-16!3;UBERON:0001204!8.21e-16!3;UBERON:0001168!8.21e-16!3;UBERON:0000358!5.59e-15!3;UBERON:0000307!5.59e-15!3;UBERON:0003350!2.40e-13!9;UBERON:0004808!2.40e-13!9;UBERON:0001277!2.40e-13!9;UBERON:0001962!1.54e-11!2;UBERON:0001961!1.54e-11!2;UBERON:0001744!1.54e-11!2;UBERON:0000485!6.66e-11!11;UBERON:0002465!5.68e-08!3;UBERON:0000064!7.77e-08!99|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.97e-33,3;UBERON:0001005,5.97e-33,3;UBERON:0007196,5.97e-33,3;UBERON:0001558,5.97e-33,3;UBERON:0001962,3.95e-23,2;UBERON:0001961,3.95e-23,2;UBERON:0001744,3.95e-23,2;UBERON:0000331,8.79e-16,3;UBERON:0002116,8.79e-16,3;UBERON:0001204,8.79e-16,3;UBERON:0002465,8.79e-16,3;UBERON:0001168,8.79e-16,3;UBERON:0003199,1.55e-12,1;UBERON:0000344,2.74e-12,15;UBERON:0002108,4.32e-12,4;UBERON:0004923,7.98e-08,24|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,5.73523202667925,0,0,0.430942465371778,7.22088993934221,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.52015919285059,3.53867111510348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,1.34307693091263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:101829917..101829924,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=358 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:101829917..101829924,+ | |||
|id=chr15:101829917..101829924,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.53e-20!15;CL:0000239!4.83e-20!6;CL:0000677!4.83e-20!6;CL:0000212!4.83e-20!6;CL:0000584!4.83e-20!6;CL:0000223!8.88e-19!20;CL:0000066!2.79e-18!25;CL:0000075!3.55e-17!7;CL:0000068!4.62e-16!3;CL:0002202!4.62e-16!3;CL:0000069!4.62e-16!3;CL:0002632!4.62e-16!3;CL:0002368!4.62e-16!3;CL:0000307!4.62e-16!3;CL:0000377!4.62e-16!3;CL:0000349!5.59e-15!3;CL:0000351!5.59e-15!3;CL:0002563!2.40e-13!9;CL:0002251!2.40e-13!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.97e-33,3;CL:0002202,5.97e-33,3;CL:0000069,5.97e-33,3;CL:0002632,5.97e-33,3;CL:0002368,5.97e-33,3;CL:0000307,5.97e-33,3;CL:0000377,5.97e-33,3;CL:0002076,3.73e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.98e-32!15;UBERON:0001242!2.89e-23!13;UBERON:0000060!2.89e-23!13;UBERON:0001262!2.89e-23!13;UBERON:0004786!2.89e-23!13;UBERON:0004923!2.12e-19!24;UBERON:0003126!4.62e-16!3;UBERON:0001005!4.62e-16!3;UBERON:0007196!4.62e-16!3;UBERON:0001558!4.62e-16!3;UBERON:0000331!8.21e-16!3;UBERON:0002116!8.21e-16!3;UBERON:0001204!8.21e-16!3;UBERON:0001168!8.21e-16!3;UBERON:0000358!5.59e-15!3;UBERON:0000307!5.59e-15!3;UBERON:0003350!2.40e-13!9;UBERON:0004808!2.40e-13!9;UBERON:0001277!2.40e-13!9;UBERON:0001962!1.54e-11!2;UBERON:0001961!1.54e-11!2;UBERON:0001744!1.54e-11!2;UBERON:0000485!6.66e-11!11;UBERON:0002465!5.68e-08!3;UBERON:0000064!7.77e-08!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.97e-33,3;UBERON:0001005,5.97e-33,3;UBERON:0007196,5.97e-33,3;UBERON:0001558,5.97e-33,3;UBERON:0001962,3.95e-23,2;UBERON:0001961,3.95e-23,2;UBERON:0001744,3.95e-23,2;UBERON:0000331,8.79e-16,3;UBERON:0002116,8.79e-16,3;UBERON:0001204,8.79e-16,3;UBERON:0002465,8.79e-16,3;UBERON:0001168,8.79e-16,3;UBERON:0003199,1.55e-12,1;UBERON:0000344,2.74e-12,15;UBERON:0002108,4.32e-12,4;UBERON:0004923,7.98e-08,24 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,5.73523202667925,0,0,0.430942465371778,7.22088993934221,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.52015919285059,3.53867111510348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,1.34307693091263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:101829917..101829924,+ | |||
}} |
Revision as of 03:27, 13 September 2013
Short description: | p@chr15:101829917..101829924, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:101829917..101829924, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.97e-33 | 3 |
epithelial cell of tracheobronchial tree | 5.97e-33 | 3 |
branched duct epithelial cell | 5.97e-33 | 3 |
epithelial cell of lower respiratory tract | 5.97e-33 | 3 |
respiratory epithelial cell | 5.97e-33 | 3 |
tracheal epithelial cell | 5.97e-33 | 3 |
tracheoblast | 5.97e-33 | 3 |
endo-epithelial cell | 3.73e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trachea | 5.97e-33 | 3 |
respiratory airway | 5.97e-33 | 3 |
tracheobronchial tree | 5.97e-33 | 3 |
lower respiratory tract | 5.97e-33 | 3 |
gut-associated lymphoid tissue | 3.95e-23 | 2 |
mucosa-associated lymphoid tissue | 3.95e-23 | 2 |
lymphoid tissue | 3.95e-23 | 2 |
ileal mucosa | 8.79e-16 | 3 |
ileum | 8.79e-16 | 3 |
mucosa of small intestine | 8.79e-16 | 3 |
lymphoid system | 8.79e-16 | 3 |
wall of small intestine | 8.79e-16 | 3 |
egg chamber | 1.55e-12 | 1 |
mucosa | 2.74e-12 | 15 |
small intestine | 4.32e-12 | 4 |
organ component layer | 7.98e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.