FFCP PHASE1:Hg19::chr4:183164548..183164562,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55714|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29944|TSSclassifier=S|UniProt=|association_with_transcript=-19bp_to_ENST00000511685_5end|coexpression_cluster_id=C84|description=CAGE_peak_4_at_ODZ3_5end|id=chr4:183164548..183164562,+|ontology_enrichment_celltype=CL:0000077!5.24e-20!19;CL:0000066!8.06e-09!254;CL:0002541!3.56e-08!3;CL:0000039!5.15e-08!7;CL:0000586!5.15e-08!7;CL:0002166!1.15e-07!3;CL:0000076!7.59e-07!62;CL:0000349!8.34e-07!3;CL:0002577!8.34e-07!3|ontology_enrichment_celltype_v019=CL:0000077;3.64e-25;19!CL:0002541;1.62e-14;3!CL:0002166;1.66e-13;3!CL:0000349;2.78e-13;19!CL:0002097;1.42e-09;2!CL:0002537;3.45e-08;5|ontology_enrichment_celltype_v019_2=CL:0000077,3.60e-25,19;CL:0002541,1.62e-14,3;CL:0002166,1.59e-13,3;CL:0000349,2.83e-13,19;CL:0002097,1.42e-09,2;CL:0002537,3.82e-08,5;CL:0000213,8.73e-07,58;CL:0000215,8.73e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!3.22e-10!239;DOID:162!4.88e-10!235|ontology_enrichment_disease_v019=DOID:170;3.50e-07;6|ontology_enrichment_disease_v019_2=DOID:170,3.50e-07,6|ontology_enrichment_uberon=UBERON:0005631!7.11e-21!14;UBERON:0000158!7.11e-21!14;UBERON:0003124!2.11e-15!7;UBERON:0000478!1.21e-12!24;UBERON:0001987!6.19e-09!4;UBERON:0004340!6.19e-09!4;UBERON:0000476!3.56e-08!3;UBERON:0000920!3.56e-08!3;UBERON:0000305!7.68e-08!7;UBERON:0004923!1.01e-07!57;UBERON:0004871!8.48e-07!8|ontology_enrichment_uberon_v019=UBERON:0005631;1.68e-20;10!UBERON:0000158;1.68e-20;10!UBERON:0003124;1.62e-14;3!UBERON:0000920;1.62e-14;3!UBERON:0000478;4.74e-13;24!UBERON:0001708;3.00e-10;4!UBERON:0008895;3.00e-10;4!UBERON:0000305;9.61e-10;7!UBERON:0003929;1.48e-09;7!UBERON:0003350;2.25e-08;8!UBERON:0011159;2.75e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.64e-23,14;UBERON:0000158,1.64e-23,14;UBERON:0003124,6.76e-16,7;UBERON:0000920,1.62e-14,3;UBERON:0000478,4.85e-13,24;UBERON:0001708,2.91e-10,4;UBERON:0008895,2.91e-10,4;UBERON:0000305,1.07e-09,7;UBERON:0004871,1.70e-08,8;UBERON:0003350,2.25e-08,8;UBERON:0011159,2.68e-08,5;UBERON:0004923,4.27e-08,66;UBERON:0010188,5.55e-07,6;UBERON:0002539,5.55e-07,6;UBERON:0008816,5.55e-07,6|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.873765488520689,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0.710019185033229,0,0,1.54608682530637,3.00020732649918,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,20.9977660248574,2.41017665312057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52159065589379,3.48613383440118,13.6962997919418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,1.57117284469109,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.709476419318,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,7.40107902686839,4.15750553165694,1.22864280839693,0,0,0,0,0,0,0,0,29.2488431956163,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63411774174908,65.4801488462091,16.4256489269883,74.3148023946535,12.7600463892768,22.0750200098488,13.3258694004659,0,0,0,0,0,0,0,0,0,0,3.25112064298064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.511625219603299,0.328461828212837,0,0,0,0,0,0,0,11.7833465769755,0,0.799238438328521,0,11.1100498280938,0,0,0,0,7.33882712797516,9.10044762917299,0,2.31160471921215,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0.864221491201268,0,0,0,14.3125938299754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.04644169735036,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,6.35645440344101,3.43106546199881,1.30497145982606,4.30741258473318,5.09349443512435,2.69210374957114,0.358177682162975,0,18.2005761150327,0,6.5590773012111,0,0.256241518587947,0,0.607719912354764,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.687034029507179,0,0,0,0,0,0,0,0,0,24.8811359757351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0635223421189,0,0.342976018874837,0,0,0,0,0,0,5.60544326627578,0,10.1485967872752,0,0,0,5.69582984303814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.109265571963696,0,0.713921808193872,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.814032686109745,0,0,0,0,0,0,0,0,0|short_description=p4@ODZ3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55714 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29944 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000511685_5end | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_4_at_ODZ3_5end | |||
|id=chr4:183164548..183164562,+ | |||
|ontology_enrichment_celltype=CL:0000077!5.24e-20!19;CL:0000066!8.06e-09!254;CL:0002541!3.56e-08!3;CL:0000039!5.15e-08!7;CL:0000586!5.15e-08!7;CL:0002166!1.15e-07!3;CL:0000076!7.59e-07!62;CL:0000349!8.34e-07!3;CL:0002577!8.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.64e-25;19!CL:0002541;1.62e-14;3!CL:0002166;1.66e-13;3!CL:0000349;2.78e-13;19!CL:0002097;1.42e-09;2!CL:0002537;3.45e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.60e-25,19;CL:0002541,1.62e-14,3;CL:0002166,1.59e-13,3;CL:0000349,2.83e-13,19;CL:0002097,1.42e-09,2;CL:0002537,3.82e-08,5;CL:0000213,8.73e-07,58;CL:0000215,8.73e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.22e-10!239;DOID:162!4.88e-10!235 | |||
|ontology_enrichment_disease_v019=DOID:170;3.50e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,3.50e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.11e-21!14;UBERON:0000158!7.11e-21!14;UBERON:0003124!2.11e-15!7;UBERON:0000478!1.21e-12!24;UBERON:0001987!6.19e-09!4;UBERON:0004340!6.19e-09!4;UBERON:0000476!3.56e-08!3;UBERON:0000920!3.56e-08!3;UBERON:0000305!7.68e-08!7;UBERON:0004923!1.01e-07!57;UBERON:0004871!8.48e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.68e-20;10!UBERON:0000158;1.68e-20;10!UBERON:0003124;1.62e-14;3!UBERON:0000920;1.62e-14;3!UBERON:0000478;4.74e-13;24!UBERON:0001708;3.00e-10;4!UBERON:0008895;3.00e-10;4!UBERON:0000305;9.61e-10;7!UBERON:0003929;1.48e-09;7!UBERON:0003350;2.25e-08;8!UBERON:0011159;2.75e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.64e-23,14;UBERON:0000158,1.64e-23,14;UBERON:0003124,6.76e-16,7;UBERON:0000920,1.62e-14,3;UBERON:0000478,4.85e-13,24;UBERON:0001708,2.91e-10,4;UBERON:0008895,2.91e-10,4;UBERON:0000305,1.07e-09,7;UBERON:0004871,1.70e-08,8;UBERON:0003350,2.25e-08,8;UBERON:0011159,2.68e-08,5;UBERON:0004923,4.27e-08,66;UBERON:0010188,5.55e-07,6;UBERON:0002539,5.55e-07,6;UBERON:0008816,5.55e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.873765488520689,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0.710019185033229,0,0,1.54608682530637,3.00020732649918,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,20.9977660248574,2.41017665312057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52159065589379,3.48613383440118,13.6962997919418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,1.57117284469109,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.709476419318,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,7.40107902686839,4.15750553165694,1.22864280839693,0,0,0,0,0,0,0,0,29.2488431956163,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63411774174908,65.4801488462091,16.4256489269883,74.3148023946535,12.7600463892768,22.0750200098488,13.3258694004659,0,0,0,0,0,0,0,0,0,0,3.25112064298064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.511625219603299,0.328461828212837,0,0,0,0,0,0,0,11.7833465769755,0,0.799238438328521,0,11.1100498280938,0,0,0,0,7.33882712797516,9.10044762917299,0,2.31160471921215,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0.864221491201268,0,0,0,14.3125938299754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.04644169735036,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,6.35645440344101,3.43106546199881,1.30497145982606,4.30741258473318,5.09349443512435,2.69210374957114,0.358177682162975,0,18.2005761150327,0,6.5590773012111,0,0.256241518587947,0,0.607719912354764,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.687034029507179,0,0,0,0,0,0,0,0,0,24.8811359757351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0635223421189,0,0.342976018874837,0,0,0,0,0,0,5.60544326627578,0,10.1485967872752,0,0,0,5.69582984303814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.109265571963696,0,0.713921808193872,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ODZ3 | |||
}} |
Revision as of 10:10, 13 September 2013
Short description: | p4@ODZ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ODZ3_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | -19bp_to_ENST00000511685_5end |
EntrezGene: | ODZ3 |
HGNC: | 29944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.60e-25 | 19 |
chorionic membrane mesenchymal stem cell | 1.62e-14 | 3 |
epithelial cell of Malassez | 1.59e-13 | 3 |
extraembryonic cell | 2.83e-13 | 19 |
cortical cell of adrenal gland | 1.42e-09 | 2 |
amnion mesenchymal stem cell | 3.82e-08 | 5 |
lining cell | 8.73e-07 | 58 |
barrier cell | 8.73e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.64e-23 | 14 |
membranous layer | 1.64e-23 | 14 |
chorion | 6.76e-16 | 7 |
egg chorion | 1.62e-14 | 3 |
extraembryonic structure | 4.85e-13 | 24 |
jaw skeleton | 2.91e-10 | 4 |
splanchnocranium | 2.91e-10 | 4 |
amnion | 1.07e-09 | 7 |
somatic layer of lateral plate mesoderm | 1.70e-08 | 8 |
epithelium of mucosa | 2.25e-08 | 8 |
primary subdivision of cranial skeletal system | 2.68e-08 | 5 |
organ component layer | 4.27e-08 | 66 |
protuberance | 5.55e-07 | 6 |
pharyngeal arch | 5.55e-07 | 6 |
embryonic head | 5.55e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 3.50e-07 | 6 |
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