FFCP PHASE1:Mm9::chr15:10930471..10930491,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22293|HGNC=|MCL_coexpression_id=730|UniProt=P58355,D3YWT7,Q541S3|association_with_transcript=0bp_to_ENSMUST00000022851,ENSMUST00000117100,NM_053077,uc007vgx.1_5end|description=CAGE_peak_1_at_Slc45a2_5end|id=chr15:10930471..10930491,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!2.95e-20!9;UBERON:0000019!2.95e-20!9;UBERON:0000047!2.95e-20!9;UBERON:0004088!2.95e-20!9;UBERON:0002104!2.95e-20!9;UBERON:0001456!2.95e-20!9;UBERON:0003072!2.95e-20!9;UBERON:0003071!2.95e-20!9;UBERON:0004128!2.95e-20!9;UBERON:0000020!1.01e-17!12;UBERON:0001032!1.01e-17!12;UBERON:0004456!1.01e-17!12;UBERON:0001444!3.39e-16!11;UBERON:0005085!3.56e-16!13;UBERON:0000014!1.40e-11!5;UBERON:0001003!1.40e-11!5;UBERON:0002097!1.40e-11!5;UBERON:0002199!1.40e-11!5;UBERON:0007029!1.40e-11!5;UBERON:0007376!1.40e-11!5;UBERON:0002416!1.40e-11!5;UBERON:0007383!1.40e-11!5|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.16e-52,9;UBERON:0000019,1.16e-52,9;UBERON:0000047,1.16e-52,9;UBERON:0010312,1.16e-52,9;UBERON:0004088,1.16e-52,9;UBERON:0002104,1.16e-52,9;UBERON:0001456,1.16e-52,9;UBERON:0003072,1.16e-52,9;UBERON:0004128,1.16e-52,9;UBERON:0003071,1.16e-52,9;UBERON:0001444,6.01e-43,11;UBERON:0000020,2.65e-39,12;UBERON:0001032,2.65e-39,12;UBERON:0004456,2.65e-39,12;UBERON:0000033,3.23e-36,13;UBERON:0005085,3.23e-36,13;UBERON:0000014,3.71e-19,5;UBERON:0001003,3.71e-19,5;UBERON:0002097,3.71e-19,5;UBERON:0002199,3.71e-19,5;UBERON:0007029,3.71e-19,5;UBERON:0007376,3.71e-19,5;UBERON:0002416,3.71e-19,5;UBERON:0007383,3.71e-19,5;UBERON:0010371,2.10e-14,73;UBERON:0007811,1.76e-12,36;UBERON:0003056,5.33e-11,49;UBERON:0004121,1.10e-10,95;UBERON:0000924,1.10e-10,95;UBERON:0006601,1.10e-10,95;UBERON:0000153,2.80e-10,43;UBERON:0002346,3.96e-08,64;UBERON:0003075,3.96e-08,64;UBERON:0007284,3.96e-08,64|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36706969418358,4.81445638962004,4.36813998423599,2.70093194708024,4.82255417074288,3.19771546011241,3.07472928683639,3.46696380870997,10.6068382002996,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,0,0,0,0,0,0,0,0,0,0.65954501176592,1.61464426695906,2.71408162176701,5.84924485615369,4.43180429311665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,1.12228454331548,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0.661774257358546,0|short_description=p1@Slc45a2}} | ||
|EntrezGene=22293 | |||
|HGNC= | |||
|MCL_coexpression_id=730 | |||
|UniProt=P58355,D3YWT7,Q541S3 | |||
|association_with_transcript=0bp_to_ENSMUST00000022851,ENSMUST00000117100,NM_053077,uc007vgx.1_5end | |||
|description=CAGE_peak_1_at_Slc45a2_5end | |||
|id=chr15:10930471..10930491,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.95e-20!9;UBERON:0000019!2.95e-20!9;UBERON:0000047!2.95e-20!9;UBERON:0004088!2.95e-20!9;UBERON:0002104!2.95e-20!9;UBERON:0001456!2.95e-20!9;UBERON:0003072!2.95e-20!9;UBERON:0003071!2.95e-20!9;UBERON:0004128!2.95e-20!9;UBERON:0000020!1.01e-17!12;UBERON:0001032!1.01e-17!12;UBERON:0004456!1.01e-17!12;UBERON:0001444!3.39e-16!11;UBERON:0005085!3.56e-16!13;UBERON:0000014!1.40e-11!5;UBERON:0001003!1.40e-11!5;UBERON:0002097!1.40e-11!5;UBERON:0002199!1.40e-11!5;UBERON:0007029!1.40e-11!5;UBERON:0007376!1.40e-11!5;UBERON:0002416!1.40e-11!5;UBERON:0007383!1.40e-11!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.16e-52,9;UBERON:0000019,1.16e-52,9;UBERON:0000047,1.16e-52,9;UBERON:0010312,1.16e-52,9;UBERON:0004088,1.16e-52,9;UBERON:0002104,1.16e-52,9;UBERON:0001456,1.16e-52,9;UBERON:0003072,1.16e-52,9;UBERON:0004128,1.16e-52,9;UBERON:0003071,1.16e-52,9;UBERON:0001444,6.01e-43,11;UBERON:0000020,2.65e-39,12;UBERON:0001032,2.65e-39,12;UBERON:0004456,2.65e-39,12;UBERON:0000033,3.23e-36,13;UBERON:0005085,3.23e-36,13;UBERON:0000014,3.71e-19,5;UBERON:0001003,3.71e-19,5;UBERON:0002097,3.71e-19,5;UBERON:0002199,3.71e-19,5;UBERON:0007029,3.71e-19,5;UBERON:0007376,3.71e-19,5;UBERON:0002416,3.71e-19,5;UBERON:0007383,3.71e-19,5;UBERON:0010371,2.10e-14,73;UBERON:0007811,1.76e-12,36;UBERON:0003056,5.33e-11,49;UBERON:0004121,1.10e-10,95;UBERON:0000924,1.10e-10,95;UBERON:0006601,1.10e-10,95;UBERON:0000153,2.80e-10,43;UBERON:0002346,3.96e-08,64;UBERON:0003075,3.96e-08,64;UBERON:0007284,3.96e-08,64 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36706969418358,4.81445638962004,4.36813998423599,2.70093194708024,4.82255417074288,3.19771546011241,3.07472928683639,3.46696380870997,10.6068382002996,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,0,0,0,0,0,0,0,0,0,0.65954501176592,1.61464426695906,2.71408162176701,5.84924485615369,4.43180429311665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,1.12228454331548,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0.661774257358546,0 | |||
|short_description=p1@Slc45a2 | |||
}} |
Revision as of 10:12, 13 September 2013
Short description: | p1@Slc45a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc45a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:730 |
Association with transcript: | 0bp_to_ENSMUST00000022851, ENSMUST00000117100, NM_053077, uc007vgx.1_5end |
EntrezGene: | Slc45a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.16e-52 | 9 |
camera-type eye | 1.16e-52 | 9 |
simple eye | 1.16e-52 | 9 |
immature eye | 1.16e-52 | 9 |
ocular region | 1.16e-52 | 9 |
visual system | 1.16e-52 | 9 |
face | 1.16e-52 | 9 |
optic cup | 1.16e-52 | 9 |
optic vesicle | 1.16e-52 | 9 |
eye primordium | 1.16e-52 | 9 |
subdivision of head | 6.01e-43 | 11 |
sense organ | 2.65e-39 | 12 |
sensory system | 2.65e-39 | 12 |
entire sense organ system | 2.65e-39 | 12 |
head | 3.23e-36 | 13 |
ectodermal placode | 3.23e-36 | 13 |
zone of skin | 3.71e-19 | 5 |
skin epidermis | 3.71e-19 | 5 |
skin of body | 3.71e-19 | 5 |
integument | 3.71e-19 | 5 |
surface | 3.71e-19 | 5 |
outer epithelium | 3.71e-19 | 5 |
integumental system | 3.71e-19 | 5 |
enveloping layer of ectoderm | 3.71e-19 | 5 |
ecto-epithelium | 2.10e-14 | 73 |
craniocervical region | 1.76e-12 | 36 |
pre-chordal neural plate | 5.33e-11 | 49 |
ectoderm-derived structure | 1.10e-10 | 95 |
ectoderm | 1.10e-10 | 95 |
presumptive ectoderm | 1.10e-10 | 95 |
anterior region of body | 2.80e-10 | 43 |
neurectoderm | 3.96e-08 | 64 |
neural plate | 3.96e-08 | 64 |
presumptive neural plate | 3.96e-08 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.