FFCP PHASE1:Hg19::chr4:25657465..25657481,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10568|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11020|TSSclassifier=S|UniProt=O95436|association_with_transcript=0bp_to_ENST00000382051_5end|coexpression_cluster_id=C95|description=CAGE_peak_1_at_SLC34A2_5end|id=chr4:25657465..25657481,+|ontology_enrichment_celltype=CL:1000507!4.25e-09!12;CL:1000494!4.25e-09!12;CL:1000449!5.39e-09!16;CL:0000039!1.28e-07!7;CL:0000586!1.28e-07!7;CL:1000497!1.29e-07!18;CL:0002518!1.29e-07!18|ontology_enrichment_celltype_v019=CL:1000507;1.41e-15;10!CL:1000494;1.41e-15;10!CL:1000449;5.33e-12;15!CL:1000497;2.88e-10;17!CL:0002518;2.88e-10;17!CL:0002681;2.25e-08;12!CL:0002584;2.25e-08;12|ontology_enrichment_celltype_v019_2=CL:1000507,1.40e-15,10;CL:1000494,1.40e-15,10;CL:1000449,5.31e-12,15;CL:1000497,2.87e-10,17;CL:0002518,2.87e-10,17;CL:0002681,2.38e-08,12;CL:0002584,2.38e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!2.65e-17!126;UBERON:0000464!1.19e-16!104;UBERON:0002553!1.45e-15!70;UBERON:0003886!8.27e-14!63;UBERON:0004119!5.19e-12!169;UBERON:0000925!5.19e-12!169;UBERON:0006595!5.19e-12!169;UBERON:0000058!6.11e-12!26;UBERON:0001008!7.40e-12!45;UBERON:0006554!2.57e-11!44;UBERON:0005177!2.86e-11!107;UBERON:0007023!4.27e-11!115;UBERON:0000080!4.56e-11!18;UBERON:0002120!4.56e-11!18;UBERON:0004875!4.56e-11!18;UBERON:0005721!4.56e-11!18;UBERON:0005754!4.56e-11!18;UBERON:0007297!4.56e-11!18;UBERON:0004876!5.20e-11!20;UBERON:0003064!7.43e-11!37;UBERON:0004921!1.60e-10!129;UBERON:0004185!1.60e-10!129;UBERON:0003887!3.88e-10!21;UBERON:0006555!6.03e-10!17;UBERON:0005103!6.03e-10!17;UBERON:0000083!6.03e-10!17;UBERON:0009201!6.03e-10!17;UBERON:0004819!6.03e-10!17;UBERON:0006553!6.03e-10!17;UBERON:0003074!6.03e-10!17;UBERON:0003060!6.03e-10!17;UBERON:0002113!6.69e-10!27;UBERON:0003918!6.69e-10!27;UBERON:0005095!6.69e-10!27;UBERON:0007687!6.69e-10!27;UBERON:0001007!1.32e-09!155;UBERON:0001555!1.32e-09!155;UBERON:0007026!1.32e-09!155;UBERON:0005172!1.45e-09!55;UBERON:0005173!1.45e-09!55;UBERON:0000489!1.51e-09!32;UBERON:0009773!4.25e-09!12;UBERON:0001231!4.25e-09!12;UBERON:0004810!4.25e-09!12;UBERON:0004211!5.39e-09!16;UBERON:0001285!5.39e-09!16;UBERON:0007684!5.39e-09!16;UBERON:0003220!5.39e-09!16;UBERON:0004208!5.39e-09!16;UBERON:0003135!6.68e-09!11;UBERON:0000922!3.29e-08!612;UBERON:0000481!3.73e-08!347;UBERON:0000077!3.78e-08!130;UBERON:0000468!4.44e-08!659;UBERON:0002417!7.68e-08!61;UBERON:0000916!7.68e-08!61;UBERON:0000062!8.23e-08!511;UBERON:0009569!1.86e-07!113;UBERON:0005156!5.00e-07!59;UBERON:0000990!5.00e-07!59;UBERON:0003133!5.64e-07!48;UBERON:0001048!5.69e-07!168;UBERON:0003101!7.97e-07!22;UBERON:0000079!7.97e-07!22;UBERON:0002323!8.63e-07!46;UBERON:0003103!9.37e-07!69|ontology_enrichment_uberon_v019=UBERON:0004211;1.41e-15;10!UBERON:0009773;1.41e-15;10!UBERON:0001231;1.41e-15;10!UBERON:0004810;1.41e-15;10!UBERON:0006555;5.33e-12;15!UBERON:0004819;5.33e-12;15!UBERON:0001285;5.33e-12;15!UBERON:0007684;5.33e-12;15!UBERON:0002113;1.98e-11;24!UBERON:0011143;1.98e-11;24!UBERON:0006554;6.21e-11;30!UBERON:0001008;6.21e-11;30!UBERON:0000489;4.31e-10;29!UBERON:0001225;2.25e-08;12!UBERON:0008987;2.25e-08;12!UBERON:0001851;5.57e-08;15!UBERON:0005172;3.41e-07;52!UBERON:0005173;3.41e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.40e-15,10;UBERON:0002113,5.26e-14,26;UBERON:0003918,5.26e-14,26;UBERON:0011143,5.26e-14,26;UBERON:0005095,5.26e-14,26;UBERON:0007687,5.26e-14,26;UBERON:0006555,2.32e-13,16;UBERON:0004819,2.32e-13,16;UBERON:0005177,1.38e-12,101;UBERON:0000489,2.00e-12,31;UBERON:0004211,5.31e-12,15;UBERON:0009773,5.31e-12,15;UBERON:0001231,5.31e-12,15;UBERON:0001285,5.31e-12,15;UBERON:0007684,5.31e-12,15;UBERON:0004208,5.31e-12,15;UBERON:0005172,5.30e-11,54;UBERON:0005173,5.30e-11,54;UBERON:0006554,9.16e-11,47;UBERON:0001008,2.02e-10,48;UBERON:0007023,2.70e-10,114;UBERON:0002417,2.79e-09,60;UBERON:0000916,2.79e-09,60;UBERON:0001225,2.38e-08,12;UBERON:0008987,2.38e-08,12;UBERON:0003103,3.24e-08,68;UBERON:0009569,4.16e-08,112;UBERON:0001851,5.66e-08,15;UBERON:0002553,3.08e-07,61|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,42.020503141758,942.72937793075,0,0,0,0,0,0,0,0,2.70866327768933,0.204000691244253,4.38836610069323,10.018259549587,6.02247470320691,6.02604670055053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,0.443458794925128,0.175669571386252,118.863511014174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,1.45125477021519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10568 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11020 | |||
|TSSclassifier=S | |||
|UniProt=O95436 | |||
|association_with_transcript=0bp_to_ENST00000382051_5end | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_1_at_SLC34A2_5end | |||
|id=chr4:25657465..25657481,+ | |||
|ontology_enrichment_celltype=CL:1000507!4.25e-09!12;CL:1000494!4.25e-09!12;CL:1000449!5.39e-09!16;CL:0000039!1.28e-07!7;CL:0000586!1.28e-07!7;CL:1000497!1.29e-07!18;CL:0002518!1.29e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.41e-15;10!CL:1000494;1.41e-15;10!CL:1000449;5.33e-12;15!CL:1000497;2.88e-10;17!CL:0002518;2.88e-10;17!CL:0002681;2.25e-08;12!CL:0002584;2.25e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.40e-15,10;CL:1000494,1.40e-15,10;CL:1000449,5.31e-12,15;CL:1000497,2.87e-10,17;CL:0002518,2.87e-10,17;CL:0002681,2.38e-08,12;CL:0002584,2.38e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!2.65e-17!126;UBERON:0000464!1.19e-16!104;UBERON:0002553!1.45e-15!70;UBERON:0003886!8.27e-14!63;UBERON:0004119!5.19e-12!169;UBERON:0000925!5.19e-12!169;UBERON:0006595!5.19e-12!169;UBERON:0000058!6.11e-12!26;UBERON:0001008!7.40e-12!45;UBERON:0006554!2.57e-11!44;UBERON:0005177!2.86e-11!107;UBERON:0007023!4.27e-11!115;UBERON:0000080!4.56e-11!18;UBERON:0002120!4.56e-11!18;UBERON:0004875!4.56e-11!18;UBERON:0005721!4.56e-11!18;UBERON:0005754!4.56e-11!18;UBERON:0007297!4.56e-11!18;UBERON:0004876!5.20e-11!20;UBERON:0003064!7.43e-11!37;UBERON:0004921!1.60e-10!129;UBERON:0004185!1.60e-10!129;UBERON:0003887!3.88e-10!21;UBERON:0006555!6.03e-10!17;UBERON:0005103!6.03e-10!17;UBERON:0000083!6.03e-10!17;UBERON:0009201!6.03e-10!17;UBERON:0004819!6.03e-10!17;UBERON:0006553!6.03e-10!17;UBERON:0003074!6.03e-10!17;UBERON:0003060!6.03e-10!17;UBERON:0002113!6.69e-10!27;UBERON:0003918!6.69e-10!27;UBERON:0005095!6.69e-10!27;UBERON:0007687!6.69e-10!27;UBERON:0001007!1.32e-09!155;UBERON:0001555!1.32e-09!155;UBERON:0007026!1.32e-09!155;UBERON:0005172!1.45e-09!55;UBERON:0005173!1.45e-09!55;UBERON:0000489!1.51e-09!32;UBERON:0009773!4.25e-09!12;UBERON:0001231!4.25e-09!12;UBERON:0004810!4.25e-09!12;UBERON:0004211!5.39e-09!16;UBERON:0001285!5.39e-09!16;UBERON:0007684!5.39e-09!16;UBERON:0003220!5.39e-09!16;UBERON:0004208!5.39e-09!16;UBERON:0003135!6.68e-09!11;UBERON:0000922!3.29e-08!612;UBERON:0000481!3.73e-08!347;UBERON:0000077!3.78e-08!130;UBERON:0000468!4.44e-08!659;UBERON:0002417!7.68e-08!61;UBERON:0000916!7.68e-08!61;UBERON:0000062!8.23e-08!511;UBERON:0009569!1.86e-07!113;UBERON:0005156!5.00e-07!59;UBERON:0000990!5.00e-07!59;UBERON:0003133!5.64e-07!48;UBERON:0001048!5.69e-07!168;UBERON:0003101!7.97e-07!22;UBERON:0000079!7.97e-07!22;UBERON:0002323!8.63e-07!46;UBERON:0003103!9.37e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.41e-15;10!UBERON:0009773;1.41e-15;10!UBERON:0001231;1.41e-15;10!UBERON:0004810;1.41e-15;10!UBERON:0006555;5.33e-12;15!UBERON:0004819;5.33e-12;15!UBERON:0001285;5.33e-12;15!UBERON:0007684;5.33e-12;15!UBERON:0002113;1.98e-11;24!UBERON:0011143;1.98e-11;24!UBERON:0006554;6.21e-11;30!UBERON:0001008;6.21e-11;30!UBERON:0000489;4.31e-10;29!UBERON:0001225;2.25e-08;12!UBERON:0008987;2.25e-08;12!UBERON:0001851;5.57e-08;15!UBERON:0005172;3.41e-07;52!UBERON:0005173;3.41e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.40e-15,10;UBERON:0002113,5.26e-14,26;UBERON:0003918,5.26e-14,26;UBERON:0011143,5.26e-14,26;UBERON:0005095,5.26e-14,26;UBERON:0007687,5.26e-14,26;UBERON:0006555,2.32e-13,16;UBERON:0004819,2.32e-13,16;UBERON:0005177,1.38e-12,101;UBERON:0000489,2.00e-12,31;UBERON:0004211,5.31e-12,15;UBERON:0009773,5.31e-12,15;UBERON:0001231,5.31e-12,15;UBERON:0001285,5.31e-12,15;UBERON:0007684,5.31e-12,15;UBERON:0004208,5.31e-12,15;UBERON:0005172,5.30e-11,54;UBERON:0005173,5.30e-11,54;UBERON:0006554,9.16e-11,47;UBERON:0001008,2.02e-10,48;UBERON:0007023,2.70e-10,114;UBERON:0002417,2.79e-09,60;UBERON:0000916,2.79e-09,60;UBERON:0001225,2.38e-08,12;UBERON:0008987,2.38e-08,12;UBERON:0003103,3.24e-08,68;UBERON:0009569,4.16e-08,112;UBERON:0001851,5.66e-08,15;UBERON:0002553,3.08e-07,61 | |||
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|short_description=p1@SLC34A2 | |||
}} |
Revision as of 10:35, 13 September 2013
Short description: | p1@SLC34A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC34A2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_ENST00000382051_5end |
EntrezGene: | SLC34A2 |
HGNC: | 11020 |
UniProt: | O95436 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.40e-15 | 10 |
nephron tubule epithelial cell | 1.40e-15 | 10 |
epithelial cell of nephron | 5.31e-12 | 15 |
kidney cell | 2.87e-10 | 17 |
kidney epithelial cell | 2.87e-10 | 17 |
kidney cortical cell | 2.38e-08 | 12 |
renal cortical epithelial cell | 2.38e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.40e-15 | 10 |
kidney | 5.26e-14 | 26 |
kidney mesenchyme | 5.26e-14 | 26 |
upper urinary tract | 5.26e-14 | 26 |
kidney rudiment | 5.26e-14 | 26 |
kidney field | 5.26e-14 | 26 |
excretory tube | 2.32e-13 | 16 |
kidney epithelium | 2.32e-13 | 16 |
trunk region element | 1.38e-12 | 101 |
cavitated compound organ | 2.00e-12 | 31 |
nephron epithelium | 5.31e-12 | 15 |
renal tubule | 5.31e-12 | 15 |
nephron tubule | 5.31e-12 | 15 |
nephron | 5.31e-12 | 15 |
uriniferous tubule | 5.31e-12 | 15 |
nephrogenic mesenchyme | 5.31e-12 | 15 |
abdomen element | 5.30e-11 | 54 |
abdominal segment element | 5.30e-11 | 54 |
urinary system structure | 9.16e-11 | 47 |
renal system | 2.02e-10 | 48 |
adult organism | 2.70e-10 | 114 |
abdominal segment of trunk | 2.79e-09 | 60 |
abdomen | 2.79e-09 | 60 |
cortex of kidney | 2.38e-08 | 12 |
renal parenchyma | 2.38e-08 | 12 |
compound organ | 3.24e-08 | 68 |
subdivision of trunk | 4.16e-08 | 112 |
cortex | 5.66e-08 | 15 |
anatomical cavity | 3.08e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.