FFCP PHASE1:Mm9::chr15:58184283..58184304,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:58184283..58184304,-|id=chr15:58184283..58184304,-|ontology_enrichment_celltype=CL:0000239!1.25e-08!6;CL:0000677!1.25e-08!6;CL:0000212!1.25e-08!6;CL:0000584!1.25e-08!6;CL:0000473!2.13e-07!3;CL:0000627!2.13e-07!3;CL:0000682!2.13e-07!3;CL:0000075!2.55e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,1.30e-14,3;CL:0000239,5.11e-12,6;CL:0000677,5.11e-12,6;CL:0000584,5.11e-12,6;CL:0000075,2.51e-10,7;CL:0000066,3.95e-08,25;CL:0002563,4.61e-08,9;CL:0002251,4.61e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.85e-27!43;UBERON:0005409!1.71e-19!59;UBERON:0000344!8.71e-15!15;UBERON:0001242!2.75e-11!13;UBERON:0000060!2.75e-11!13;UBERON:0001262!2.75e-11!13;UBERON:0004786!2.75e-11!13;UBERON:0001007!6.92e-09!128;UBERON:0001555!6.92e-09!128;UBERON:0007026!6.92e-09!128;UBERON:0004119!1.26e-08!130;UBERON:0000925!1.26e-08!130;UBERON:0006595!1.26e-08!130;UBERON:0004923!2.98e-08!24;UBERON:0004921!2.08e-07!126;UBERON:0004185!2.08e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.35e-29,31;UBERON:0000344,9.62e-23,15;UBERON:0005409,9.91e-19,47;UBERON:0001242,9.88e-16,13;UBERON:0001262,9.88e-16,13;UBERON:0004786,9.88e-16,13;UBERON:0004923,9.31e-14,24;UBERON:0002108,1.27e-10,4;UBERON:0001962,1.82e-10,2;UBERON:0001961,1.82e-10,2;UBERON:0001744,1.82e-10,2;UBERON:0001007,1.95e-08,116;UBERON:0001555,1.95e-08,116;UBERON:0007026,1.95e-08,116;UBERON:0004119,3.02e-08,118;UBERON:0000925,3.02e-08,118;UBERON:0006595,3.02e-08,118;UBERON:0003350,4.61e-08,9;UBERON:0004808,4.61e-08,9;UBERON:0001277,4.61e-08,9;UBERON:0002465,3.01e-07,3|phase1_expression=0,0,2.72999543633722,0.60492842261366,2.00358291978539,1.00727563147134,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,2.52350209173887,2.8711598205751,2.15380998079537,2.80112602491656,2.28028103347649,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,1.89811624617805,2.14108641141214,3.01602250560323,1.1937388322469,0.974820435595601,1.79763881730844,2.59365659849633,2.19055400579804,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:58184283..58184304,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:58184283..58184304,- | |||
|id=chr15:58184283..58184304,- | |||
|ontology_enrichment_celltype=CL:0000239!1.25e-08!6;CL:0000677!1.25e-08!6;CL:0000212!1.25e-08!6;CL:0000584!1.25e-08!6;CL:0000473!2.13e-07!3;CL:0000627!2.13e-07!3;CL:0000682!2.13e-07!3;CL:0000075!2.55e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.30e-14,3;CL:0000239,5.11e-12,6;CL:0000677,5.11e-12,6;CL:0000584,5.11e-12,6;CL:0000075,2.51e-10,7;CL:0000066,3.95e-08,25;CL:0002563,4.61e-08,9;CL:0002251,4.61e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.85e-27!43;UBERON:0005409!1.71e-19!59;UBERON:0000344!8.71e-15!15;UBERON:0001242!2.75e-11!13;UBERON:0000060!2.75e-11!13;UBERON:0001262!2.75e-11!13;UBERON:0004786!2.75e-11!13;UBERON:0001007!6.92e-09!128;UBERON:0001555!6.92e-09!128;UBERON:0007026!6.92e-09!128;UBERON:0004119!1.26e-08!130;UBERON:0000925!1.26e-08!130;UBERON:0006595!1.26e-08!130;UBERON:0004923!2.98e-08!24;UBERON:0004921!2.08e-07!126;UBERON:0004185!2.08e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.35e-29,31;UBERON:0000344,9.62e-23,15;UBERON:0005409,9.91e-19,47;UBERON:0001242,9.88e-16,13;UBERON:0001262,9.88e-16,13;UBERON:0004786,9.88e-16,13;UBERON:0004923,9.31e-14,24;UBERON:0002108,1.27e-10,4;UBERON:0001962,1.82e-10,2;UBERON:0001961,1.82e-10,2;UBERON:0001744,1.82e-10,2;UBERON:0001007,1.95e-08,116;UBERON:0001555,1.95e-08,116;UBERON:0007026,1.95e-08,116;UBERON:0004119,3.02e-08,118;UBERON:0000925,3.02e-08,118;UBERON:0006595,3.02e-08,118;UBERON:0003350,4.61e-08,9;UBERON:0004808,4.61e-08,9;UBERON:0001277,4.61e-08,9;UBERON:0002465,3.01e-07,3 | |||
|phase1_expression=0,0,2.72999543633722,0.60492842261366,2.00358291978539,1.00727563147134,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,2.52350209173887,2.8711598205751,2.15380998079537,2.80112602491656,2.28028103347649,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,1.89811624617805,2.14108641141214,3.01602250560323,1.1937388322469,0.974820435595601,1.79763881730844,2.59365659849633,2.19055400579804,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:58184283..58184304,- | |||
}} |
Revision as of 10:37, 13 September 2013
Short description: | p@chr15:58184283..58184304, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:58184283..58184304, - |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.30e-14 | 3 |
brush border epithelial cell | 5.11e-12 | 6 |
gut absorptive cell | 5.11e-12 | 6 |
enterocyte | 5.11e-12 | 6 |
columnar/cuboidal epithelial cell | 2.51e-10 | 7 |
epithelial cell | 3.95e-08 | 25 |
intestinal epithelial cell | 4.61e-08 | 9 |
epithelial cell of alimentary canal | 4.61e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.35e-29 | 31 |
mucosa | 9.62e-23 | 15 |
gastrointestinal system | 9.91e-19 | 47 |
intestinal mucosa | 9.88e-16 | 13 |
wall of intestine | 9.88e-16 | 13 |
gastrointestinal system mucosa | 9.88e-16 | 13 |
organ component layer | 9.31e-14 | 24 |
small intestine | 1.27e-10 | 4 |
gut-associated lymphoid tissue | 1.82e-10 | 2 |
mucosa-associated lymphoid tissue | 1.82e-10 | 2 |
lymphoid tissue | 1.82e-10 | 2 |
digestive system | 1.95e-08 | 116 |
digestive tract | 1.95e-08 | 116 |
primitive gut | 1.95e-08 | 116 |
endoderm-derived structure | 3.02e-08 | 118 |
endoderm | 3.02e-08 | 118 |
presumptive endoderm | 3.02e-08 | 118 |
epithelium of mucosa | 4.61e-08 | 9 |
gastrointestinal system epithelium | 4.61e-08 | 9 |
intestinal epithelium | 4.61e-08 | 9 |
lymphoid system | 3.01e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.