FFCP PHASE1:Mm9::chr15:58720824..58720866,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75841|HGNC=|MCL_coexpression_id=2784|UniProt=Q7TMV1|association_with_transcript=40bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end|description=CAGE_peak_2_at_Rnf139_5end|id=chr15:58720824..58720866,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.28e-13!22;UBERON:0007499!4.28e-13!22;UBERON:0006925!4.28e-13!22;UBERON:0009497!4.28e-13!22;UBERON:0000015!4.28e-13!22;UBERON:0002423!4.28e-13!22;UBERON:0006235!4.28e-13!22;UBERON:0008835!4.28e-13!22;UBERON:0003894!4.28e-13!22;UBERON:0004161!4.28e-13!22;UBERON:0008836!4.28e-13!22;UBERON:0002365!8.65e-13!25;UBERON:0002330!8.65e-13!25;UBERON:0005172!3.32e-12!49;UBERON:0005173!3.32e-12!49;UBERON:0002417!3.32e-12!49;UBERON:0000916!3.32e-12!49;UBERON:0005256!4.50e-12!47;UBERON:0003914!5.10e-12!47;UBERON:0009854!1.61e-11!23;UBERON:0009856!1.61e-11!23;UBERON:0004119!2.95e-11!130;UBERON:0000925!2.95e-11!130;UBERON:0006595!2.95e-11!130;UBERON:0001007!9.19e-11!128;UBERON:0001555!9.19e-11!128;UBERON:0007026!9.19e-11!128;UBERON:0004921!3.74e-10!126;UBERON:0004185!3.74e-10!126;UBERON:0002100!2.90e-09!98;UBERON:0009569!3.47e-09!66;UBERON:0003104!4.99e-09!131;UBERON:0009142!4.99e-09!131;UBERON:0004923!1.02e-07!24;UBERON:0005409!2.46e-07!59;UBERON:0005177!2.84e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.94e-13,61;UBERON:0009142,1.94e-13,61;UBERON:0002107,4.27e-13,22;UBERON:0007499,4.27e-13,22;UBERON:0006925,4.27e-13,22;UBERON:0009497,4.27e-13,22;UBERON:0000015,4.27e-13,22;UBERON:0002423,4.27e-13,22;UBERON:0006235,4.27e-13,22;UBERON:0008835,4.27e-13,22;UBERON:0003894,4.27e-13,22;UBERON:0004161,4.27e-13,22;UBERON:0008836,4.27e-13,22;UBERON:0002365,8.63e-13,25;UBERON:0002330,8.63e-13,25;UBERON:0005256,1.11e-12,45;UBERON:0005172,3.32e-12,49;UBERON:0005173,3.32e-12,49;UBERON:0002417,3.32e-12,49;UBERON:0000916,3.32e-12,49;UBERON:0002100,4.49e-12,90;UBERON:0003914,5.09e-12,47;UBERON:0009854,1.46e-11,23;UBERON:0009856,1.46e-11,23;UBERON:0004119,2.25e-10,118;UBERON:0000925,2.25e-10,118;UBERON:0006595,2.25e-10,118;UBERON:0001007,6.68e-10,116;UBERON:0001555,6.68e-10,116;UBERON:0007026,6.68e-10,116;UBERON:0005177,1.33e-09,79;UBERON:0004921,2.58e-09,114;UBERON:0009569,3.46e-09,66;UBERON:0004923,1.02e-07,24;UBERON:0005409,5.99e-07,47|phase1_expression=4.32401887182944,10.8182376368202,13.6499771816861,15.1232105653415,16.0286633582831,8.39396359559449,5.37309073369709,10.8463591690924,24.7788150986933,28.7899367376052,4.45166717386313,5.2649624936922,8.38883576662908,9.09172185157573,32.9778664197506,36.4455481301687,51.7675789814828,7.72882305127682,7.40417941470989,14.8536378129311,3.99703463710028,2.08510997521859,2.61199789138935,11.6794468639187,11.0116454912242,10.9104073181854,9.90752591165872,10.3426191689227,18.2422482678119,20.6664706403143,15.0776747245607,6.98533740805594,3.69038872550742,0,2.88851619751275,9.64160943079256,5.9209113316087,8.78916424547506,8.5946887897618,5.75876118371178,5.88231488031014,4.78131839470912,3.88408282424923,15.9888958828983,16.2203089951223,16.702754446713,5.47673941043627,1.74420125104357,4.17403747195497,5.8328969722285,3.49966054063406,4.31257693094915,12.5836954543302,8.70434570413613,8.06625117941913,5.91696702882678,8.30946975822394,12.3761302146586,1.82084814773638,0,0.633831403506179,3.38844532069132,2.66788438833342,1.7997994345628,3.9554654502679,2.8419204597844,2.69640099466564,1.53687322128622,1.03689612308478,0.675029691658453,0.210324961351382,2.57085885963423,1.32521124570968,0.734944795289724,0.575072826109418,0.919218786610021,2.20231761998777,3.19218345212969,2.91852413186863,0.659431438650969,0.548925861614458,0.52091337055676,5.02529398202486,5.06486349028512,4.12555268997387,2.65165726926301,2.98980529678116,0.931997229126503,6.96680978665293,7.25486977025141,10.7249860819621,25.8127163094416,33.9985666853875,26.9851595818909,49.3830077260229,56.8994146613616,13.6231087527799,4.60161870960756,6.49465011507172,4.59341446863442,4.78867627240714,2.56652954828636,2.54805239706646,7.11066703153331,4.32982082022428,5.82727690592727,7.07734223020697,15.7573754012303,4.66088190564909,8.31275978763019,4.16364784238726,2.43572382649713,5.5347719341454,5.12456977878917,6.58496759959947,9.04799457573663,11.8653584512499,14.4599356919912,16.8076004870476,10.3530783966342,18.9923705875938,20.3647606316793,0,5.5628351432194,3.35114730901528,13.0283098156382,4.19352935770721,1.19980546198682,2.66847476853436,3.59497534571574,0.915001205637253,2.26177833803156,3.30266208365325,3.3243009452943,2.28566849015516,4.05603157669394,6.21220119486929,11.1966273549084,4.0435641349388,9.25944165900485,1.43132487258974,2.29902104433473,1.80062129805349,2.56198190320716,2.17716797284249,1.66547836370305,3.09215691047105,6.72628763921441,0.215567992932842,1.89106080167819,2.63926686245923,2.41115305670332,1.94633074457919,5.57203466435466,5.76189981942242,2.7864797354589,2.1066395619397,2.058783256917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| ||
|EntrezGene=75841 | |||
|HGNC= | |||
|MCL_coexpression_id=2784 | |||
|UniProt=Q7TMV1 | |||
|association_with_transcript=40bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end | |||
|description=CAGE_peak_2_at_Rnf139_5end | |||
|id=chr15:58720824..58720866,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.28e-13!22;UBERON:0007499!4.28e-13!22;UBERON:0006925!4.28e-13!22;UBERON:0009497!4.28e-13!22;UBERON:0000015!4.28e-13!22;UBERON:0002423!4.28e-13!22;UBERON:0006235!4.28e-13!22;UBERON:0008835!4.28e-13!22;UBERON:0003894!4.28e-13!22;UBERON:0004161!4.28e-13!22;UBERON:0008836!4.28e-13!22;UBERON:0002365!8.65e-13!25;UBERON:0002330!8.65e-13!25;UBERON:0005172!3.32e-12!49;UBERON:0005173!3.32e-12!49;UBERON:0002417!3.32e-12!49;UBERON:0000916!3.32e-12!49;UBERON:0005256!4.50e-12!47;UBERON:0003914!5.10e-12!47;UBERON:0009854!1.61e-11!23;UBERON:0009856!1.61e-11!23;UBERON:0004119!2.95e-11!130;UBERON:0000925!2.95e-11!130;UBERON:0006595!2.95e-11!130;UBERON:0001007!9.19e-11!128;UBERON:0001555!9.19e-11!128;UBERON:0007026!9.19e-11!128;UBERON:0004921!3.74e-10!126;UBERON:0004185!3.74e-10!126;UBERON:0002100!2.90e-09!98;UBERON:0009569!3.47e-09!66;UBERON:0003104!4.99e-09!131;UBERON:0009142!4.99e-09!131;UBERON:0004923!1.02e-07!24;UBERON:0005409!2.46e-07!59;UBERON:0005177!2.84e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.94e-13,61;UBERON:0009142,1.94e-13,61;UBERON:0002107,4.27e-13,22;UBERON:0007499,4.27e-13,22;UBERON:0006925,4.27e-13,22;UBERON:0009497,4.27e-13,22;UBERON:0000015,4.27e-13,22;UBERON:0002423,4.27e-13,22;UBERON:0006235,4.27e-13,22;UBERON:0008835,4.27e-13,22;UBERON:0003894,4.27e-13,22;UBERON:0004161,4.27e-13,22;UBERON:0008836,4.27e-13,22;UBERON:0002365,8.63e-13,25;UBERON:0002330,8.63e-13,25;UBERON:0005256,1.11e-12,45;UBERON:0005172,3.32e-12,49;UBERON:0005173,3.32e-12,49;UBERON:0002417,3.32e-12,49;UBERON:0000916,3.32e-12,49;UBERON:0002100,4.49e-12,90;UBERON:0003914,5.09e-12,47;UBERON:0009854,1.46e-11,23;UBERON:0009856,1.46e-11,23;UBERON:0004119,2.25e-10,118;UBERON:0000925,2.25e-10,118;UBERON:0006595,2.25e-10,118;UBERON:0001007,6.68e-10,116;UBERON:0001555,6.68e-10,116;UBERON:0007026,6.68e-10,116;UBERON:0005177,1.33e-09,79;UBERON:0004921,2.58e-09,114;UBERON:0009569,3.46e-09,66;UBERON:0004923,1.02e-07,24;UBERON:0005409,5.99e-07,47 | |||
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| |||
|short_description=p2@Rnf139 | |||
}} | |||
Revision as of 10:37, 13 September 2013
| Short description: | p2@Rnf139 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Rnf139_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2784 |
| Association with transcript: | 40bp_to_ENSMUST00000036904, NM_175226, uc007vtq.2_5end |
| EntrezGene: | Rnf139 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
