FFCP PHASE1:Mm9::chr15:81688747..81688758,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57259|HGNC=|UniProt=Q9JM55,Q543X9|association_with_transcript=0bp_to_ENSMUST00000050467,NM_020507,uc007wxm.1,uc007wxn.1_5end|description=CAGE_peak_2_at_Tob2_5end|id=chr15:81688747..81688758,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.63e-08!49;UBERON:0000033!9.19e-08!63;UBERON:0000955!8.04e-07!50;UBERON:0006238!8.04e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.08e-08,49;UBERON:0000955,1.26e-07,47;UBERON:0006238,1.26e-07,47;UBERON:0002346,2.82e-07,64;UBERON:0003075,2.82e-07,64;UBERON:0007284,2.82e-07,64;UBERON:0002616,4.08e-07,46|phase1_expression=1.60148847104794,0.348975407639361,0.454999239389536,0,0,0.503637815735669,1.40167584357315,2.58246646883153,2.67498572088167,3.04283884218592,0.856089841127525,2.07407613387875,1.54080656938085,2.97229368224591,2.6648780945253,0.809901069559304,1.39912375625629,2.83915948822414,4.2505474417779,3.81950686618227,1.7008658030214,0.595745707205312,0,0.95995453676044,0.91763712426868,1.72269589234506,0.430761996159075,0.861884930743556,0.190023419456374,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0.577703239502549,1.16364251750945,0.816677425049476,2.92972141515835,4.6880120671428,3.14114246384279,4.70585190424811,6.14740936462601,4.36959317728038,1.00717454380462,0.811015449756117,1.83546752161682,0.782391344348039,2.39827672018491,1.09843091367236,0.972149495371417,0.979904951377538,1.43752564364972,4.69791296961662,0.725362142011344,4.03312558970957,1.02903774414379,0.573066879877513,2.57836046138721,1.21389876515759,1.05798195854407,3.1691570175309,2.37191172448392,0.889294796111139,2.6996991518442,3.9554654502679,3.5524005747305,2.39680088414724,1.92109152660777,3.31806759387129,3.24014251996058,3.99617426567626,0.571301968807607,2.87129103237098,2.69479758272899,2.68367318851062,4.5960939330501,0,1.65993539510744,1.68967186581868,2.37395317914349,1.9212405156506,1.56274011167028,3.07101298901519,1.12552522006336,1.83357897332172,0.883885756421003,1.70846016958924,1.4911955666024,1.51452386666368,1.36028808192214,3.76823835312181,0.860423876981386,0,0.539703191637817,0,0.448026887097336,1.26399978118577,1.02258193546835,0.259786004602869,3.18005617059306,1.97180787687353,0,0,0,0,0.253359865475099,0.505524445014783,0.91347103775248,2.84831672011889,2.07818994690755,1.04091196059682,1.52232739156071,1.84492397804847,0.753613202763113,1.64624189989987,2.38766523526383,1.73036477414062,2.60278842455841,3.5384422077995,1.61766849947409,1.10420759230197,3.87900202508178,0,7.61230072230023,7.95897485891129,1.53274233125155,1.07833612055328,1.19980546198682,1.39777249780371,2.84602214869163,4.11750542536764,2.89005009859588,2.60736480288415,1.79000820131231,3.32460871295296,3.0825839982874,3.86989582631202,1.8661045591514,1.26361379216837,1.68353484709179,2.08192708740326,1.83921683546778,3.60124259610698,2.10986744970001,4.49040894398764,3.07472928683639,2.90475346135159,4.39795730256327,2.15567992932842,1.70195472151037,2.28736461413134,1.53437012699302,3.05851974148158,1.74126083261083,1.4404749548556,2.9855140022774,0.702213187313235,1.80143534980301,0.568326998791185,1.65700618028402,1.40715635988658,1.62055855314913,2.13070262026689,1.77087808572663,1.07986979021165,0.697601834251224,1.60964040839772,2.10177616260905,0.329119699826961,0.985004784474571,0.810688095458557,2.77779976108131,1.75640092232841,0.671032093801859,3.78521907415429,5.45394445610208,1.32167513193519,1.32225283331772,1.91959425481711,1.85789337488351,2.83508414908605,2.62188582010345,1.55664630691409,0.951128130562796,0.474529061544512,0.823494773620054,1.00534083520108,0.994782360205754,1.55971269695296,4.49409704327111,1.29682829924817,0.796565093017469,2.0863469104839,2.05647322697512,4.50830942692322,2.03651327845314,1.16371492300575,2.17421041659988,1.58091342810643,0.885660887877613,0.784993639206874,0.616985819609003,0.889357881261447,2.66952169145751,0.982794975566015,1.34917267430912,1.62288097110802,1.4470629585145,1.52775511068852,1.15078454980324,0.972811360650212,0.274561413188081,4.31304619582064,0.372140947668503,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,2.40179147216586,2.65287976478679,2.60743962307241,3.22515662972857,2.11221223459652,3.1826188913945,3.09456733151818,2.73187107000918,1.7339865851681,2.43611158613652,3.98636921643718,2.13022309130459,2.59027472798843,1.88043776155965,6.03165135757089,2.17562273527484,0.491764273019036,2.20749397043786,2.0871576698413,2.22702204525186,1.80328439914343,1.00988370881749,1.89304931649754,0,2.36965737506079,1.91175038362042,1.33679204449436,1.41538265394416,1.61924280669958,1.16902343164525,3.55759000151871,8.35435422696698,1.56134093729095,2.13678724400706,4.0721739838394,2.63952196756057,0,1.94224508923985,1.209294227859,0.754420319023592,2.65771703592696,1.53717573971964,1.03371317267288,1.45413491791002,0.712994756769443,0.94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| ||
|EntrezGene=57259 | |||
|HGNC= | |||
|UniProt=Q9JM55,Q543X9 | |||
|association_with_transcript=0bp_to_ENSMUST00000050467,NM_020507,uc007wxm.1,uc007wxn.1_5end | |||
|description=CAGE_peak_2_at_Tob2_5end | |||
|id=chr15:81688747..81688758,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.63e-08!49;UBERON:0000033!9.19e-08!63;UBERON:0000955!8.04e-07!50;UBERON:0006238!8.04e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.08e-08,49;UBERON:0000955,1.26e-07,47;UBERON:0006238,1.26e-07,47;UBERON:0002346,2.82e-07,64;UBERON:0003075,2.82e-07,64;UBERON:0007284,2.82e-07,64;UBERON:0002616,4.08e-07,46 | |||
|phase1_expression=1.60148847104794,0.348975407639361,0.454999239389536,0,0,0.503637815735669,1.40167584357315,2.58246646883153,2.67498572088167,3.04283884218592,0.856089841127525,2.07407613387875,1.54080656938085,2.97229368224591,2.6648780945253,0.809901069559304,1.39912375625629,2.83915948822414,4.2505474417779,3.81950686618227,1.7008658030214,0.595745707205312,0,0.95995453676044,0.91763712426868,1.72269589234506,0.430761996159075,0.861884930743556,0.190023419456374,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0.577703239502549,1.16364251750945,0.816677425049476,2.92972141515835,4.6880120671428,3.14114246384279,4.70585190424811,6.14740936462601,4.36959317728038,1.00717454380462,0.811015449756117,1.83546752161682,0.782391344348039,2.39827672018491,1.09843091367236,0.972149495371417,0.979904951377538,1.43752564364972,4.69791296961662,0.725362142011344,4.03312558970957,1.02903774414379,0.573066879877513,2.57836046138721,1.21389876515759,1.05798195854407,3.1691570175309,2.37191172448392,0.889294796111139,2.6996991518442,3.9554654502679,3.5524005747305,2.39680088414724,1.92109152660777,3.31806759387129,3.24014251996058,3.99617426567626,0.571301968807607,2.87129103237098,2.69479758272899,2.68367318851062,4.5960939330501,0,1.65993539510744,1.68967186581868,2.37395317914349,1.9212405156506,1.56274011167028,3.07101298901519,1.12552522006336,1.83357897332172,0.883885756421003,1.70846016958924,1.4911955666024,1.51452386666368,1.36028808192214,3.76823835312181,0.860423876981386,0,0.539703191637817,0,0.448026887097336,1.26399978118577,1.02258193546835,0.259786004602869,3.18005617059306,1.97180787687353,0,0,0,0,0.253359865475099,0.505524445014783,0.91347103775248,2.84831672011889,2.07818994690755,1.04091196059682,1.52232739156071,1.84492397804847,0.753613202763113,1.64624189989987,2.38766523526383,1.73036477414062,2.60278842455841,3.5384422077995,1.61766849947409,1.10420759230197,3.87900202508178,0,7.61230072230023,7.95897485891129,1.53274233125155,1.07833612055328,1.19980546198682,1.39777249780371,2.84602214869163,4.11750542536764,2.89005009859588,2.60736480288415,1.79000820131231,3.32460871295296,3.0825839982874,3.86989582631202,1.8661045591514,1.26361379216837,1.68353484709179,2.08192708740326,1.83921683546778,3.60124259610698,2.10986744970001,4.49040894398764,3.07472928683639,2.90475346135159,4.39795730256327,2.15567992932842,1.70195472151037,2.28736461413134,1.53437012699302,3.05851974148158,1.74126083261083,1.4404749548556,2.9855140022774,0.702213187313235,1.80143534980301,0.568326998791185,1.65700618028402,1.40715635988658,1.62055855314913,2.13070262026689,1.77087808572663,1.07986979021165,0.697601834251224,1.60964040839772,2.10177616260905,0.329119699826961,0.985004784474571,0.810688095458557,2.77779976108131,1.75640092232841,0.671032093801859,3.78521907415429,5.45394445610208,1.32167513193519,1.32225283331772,1.91959425481711,1.85789337488351,2.83508414908605,2.62188582010345,1.55664630691409,0.951128130562796,0.474529061544512,0.823494773620054,1.00534083520108,0.994782360205754,1.55971269695296,4.49409704327111,1.29682829924817,0.796565093017469,2.0863469104839,2.05647322697512,4.50830942692322,2.03651327845314,1.16371492300575,2.17421041659988,1.58091342810643,0.885660887877613,0.784993639206874,0.616985819609003,0.889357881261447,2.66952169145751,0.982794975566015,1.34917267430912,1.62288097110802,1.4470629585145,1.52775511068852,1.15078454980324,0.972811360650212,0.274561413188081,4.31304619582064,0.372140947668503,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,2.40179147216586,2.65287976478679,2.60743962307241,3.22515662972857,2.11221223459652,3.1826188913945,3.09456733151818,2.73187107000918,1.7339865851681,2.43611158613652,3.98636921643718,2.13022309130459,2.59027472798843,1.88043776155965,6.03165135757089,2.17562273527484,0.491764273019036,2.20749397043786,2.0871576698413,2.22702204525186,1.80328439914343,1.00988370881749,1.89304931649754,0,2.36965737506079,1.91175038362042,1.33679204449436,1.41538265394416,1.61924280669958,1.16902343164525,3.55759000151871,8.35435422696698,1.56134093729095,2.13678724400706,4.0721739838394,2.63952196756057,0,1.94224508923985,1.209294227859,0.754420319023592,2.65771703592696,1.53717573971964,1.03371317267288,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,2.38307724027652,1.62054984628179,2.58717367565509,2.14337035031592,2.30542303734956,3.21063871683727,2.46823530903181,4.56697423671899,1.64270195644597,3.60114520468494,1.10264199027481,0.98931751764888,2.26050197374268,1.86970067277283,1.3130957840345,1.80554989719567,0.582961673259701,1.48340241608408,1.87957968877638,2.47664241555867,2.40752885580625,1.50694765603753,3.00727300986255,3.43167259809784,1.01987057996313,2.09927178485487,1.65839968565309,0,2.53068794864908,2.03319467126849,1.29606408986162,2.50905955217362,1.31017538247707,1.48350781023303,2.39695021603474,0.785267825952089,1.03691978633434,0.621339313086926,2.25477175473676,2.0932316446157,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| |||
|short_description=p2@Tob2 | |||
}} | |||
Revision as of 11:18, 13 September 2013
| Short description: | p2@Tob2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Tob2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000050467, NM_020507, uc007wxm.1, uc007wxn.1_5end |
| EntrezGene: | Tob2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pre-chordal neural plate | 3.08e-08 | 49 |
| brain | 1.26e-07 | 47 |
| future brain | 1.26e-07 | 47 |
| neurectoderm | 2.82e-07 | 64 |
| neural plate | 2.82e-07 | 64 |
| presumptive neural plate | 2.82e-07 | 64 |
| regional part of brain | 4.08e-07 | 46 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
