FFCP PHASE1:Hg19::chr4:74283240..74283296,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=399|TSSclassifier=N|UniProt=|association_with_transcript=-426bp_to_ENST00000486939_5end|coexpression_cluster_id=C5|description=CAGE_peak_6_at_ALB_5end|id=chr4:74283240..74283296,+|ontology_enrichment_celltype=CL:0000181!1.81e-27!12;CL:0000417!1.81e-27!12;CL:0000668!1.81e-27!12;CL:0000414!1.81e-27!12;CL:0000412!1.81e-27!12;CL:0000182!1.81e-27!12;CL:0000223!5.64e-08!59|ontology_enrichment_celltype_v019=CL:0000182;9.93e-40;12|ontology_enrichment_celltype_v019_2=CL:0000182,9.93e-40,12;CL:0000223,9.87e-11,58|ontology_enrichment_development_v019=UBERON:0004161;3.60e-30;11!UBERON:0009497;1.50e-25;13!UBERON:0000358;2.11e-14;1!UBERON:0001041;4.35e-11;30!UBERON:0003104;1.02e-10;31!CL:0000223;3.32e-08;58|ontology_enrichment_disease=DOID:114!3.78e-14!2;DOID:178!8.12e-08!1;DOID:326!8.12e-08!1;DOID:3978!8.12e-08!1;DOID:3394!8.12e-08!1;DOID:5844!8.12e-08!1;DOID:1287!1.64e-07!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.69e-28!19;UBERON:0006925!3.69e-28!19;UBERON:0008836!3.69e-28!19;UBERON:0009497!6.78e-26!25;UBERON:0000015!6.78e-26!25;UBERON:0002423!6.78e-26!25;UBERON:0006235!6.78e-26!25;UBERON:0004161!6.78e-26!25;UBERON:0005057!9.84e-25!26;UBERON:0008835!3.99e-24!22;UBERON:0003894!3.99e-24!22;UBERON:0009854!5.15e-23!23;UBERON:0007499!4.66e-21!25;UBERON:0009856!3.42e-20!26;UBERON:0005172!2.55e-18!55;UBERON:0005173!2.55e-18!55;UBERON:0002365!1.06e-16!31;UBERON:0002330!1.06e-16!31;UBERON:0002417!2.85e-16!61;UBERON:0000916!2.85e-16!61;UBERON:0003929!5.17e-16!54;UBERON:0002368!1.26e-14!35;UBERON:0000949!1.22e-13!45;UBERON:0002530!5.90e-10!59;UBERON:0005911!8.92e-10!82;UBERON:0005177!1.15e-09!107;UBERON:0002146!4.71e-08!1;UBERON:0005623!4.71e-08!1;UBERON:0001301!8.69e-08!1;UBERON:0009569!1.19e-07!113;UBERON:0007190!1.21e-07!1;UBERON:0004921!1.54e-07!129;UBERON:0004185!1.54e-07!129;UBERON:0000077!1.60e-07!130;UBERON:0001007!7.52e-07!155;UBERON:0001555!7.52e-07!155;UBERON:0007026!7.52e-07!155|ontology_enrichment_uberon_v019=UBERON:0002107;3.26e-44;19!UBERON:0006925;3.26e-44;19!UBERON:0002423;1.81e-33;25!UBERON:0002365;7.18e-26;31!UBERON:0002330;7.18e-26;31!UBERON:0002368;8.23e-23;33!UBERON:0000949;5.78e-20;43!UBERON:0001007;1.22e-10;81!UBERON:0005172;4.94e-10;52!UBERON:0005173;4.94e-10;52!UBERON:0002417;7.93e-09;58!UBERON:0000916;7.93e-09;58!UBERON:0002530;1.00e-08;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.26e-44,19;UBERON:0006925,3.26e-44,19;UBERON:0008836,3.26e-44,19;UBERON:0008835,4.13e-38,22;UBERON:0003894,4.13e-38,22;UBERON:0009854,1.98e-36,23;UBERON:0007499,1.81e-33,25;UBERON:0009497,1.81e-33,25;UBERON:0000015,1.81e-33,25;UBERON:0002423,1.81e-33,25;UBERON:0006235,1.81e-33,25;UBERON:0004161,1.81e-33,25;UBERON:0009856,3.69e-32,26;UBERON:0002365,7.10e-27,31;UBERON:0002330,7.10e-27,31;UBERON:0002368,9.90e-24,35;UBERON:0000949,4.78e-23,45;UBERON:0003929,4.43e-19,54;UBERON:0005172,3.88e-15,54;UBERON:0005173,3.88e-15,54;UBERON:0002530,8.59e-14,59;UBERON:0002417,1.50e-13,60;UBERON:0000916,1.50e-13,60;UBERON:0005911,3.01e-12,82;UBERON:0004921,4.59e-10,118;UBERON:0005177,9.49e-10,101;UBERON:0001041,4.21e-09,87;UBERON:0001007,5.56e-08,145;UBERON:0001555,5.56e-08,145;UBERON:0007026,5.56e-08,145;UBERON:0004119,4.01e-07,160;UBERON:0000925,4.01e-07,160;UBERON:0006595,4.01e-07,160;UBERON:0009569,6.95e-07,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,370.124701679746,107.128166617861,76.2118979619011,0,4.5505722260952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.0864873747123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.7857596253072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0.199679000498991,0.858452096273142,0,0,0,0,16.30811873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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-426bp_to_ENST00000486939_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_ALB_5end | |||
|id=chr4:74283240..74283296,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.81e-27!12;CL:0000417!1.81e-27!12;CL:0000668!1.81e-27!12;CL:0000414!1.81e-27!12;CL:0000412!1.81e-27!12;CL:0000182!1.81e-27!12;CL:0000223!5.64e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.93e-40;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.93e-40,12;CL:0000223,9.87e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.60e-30;11!UBERON:0009497;1.50e-25;13!UBERON:0000358;2.11e-14;1!UBERON:0001041;4.35e-11;30!UBERON:0003104;1.02e-10;31!CL:0000223;3.32e-08;58 | |||
|ontology_enrichment_disease=DOID:114!3.78e-14!2;DOID:178!8.12e-08!1;DOID:326!8.12e-08!1;DOID:3978!8.12e-08!1;DOID:3394!8.12e-08!1;DOID:5844!8.12e-08!1;DOID:1287!1.64e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.69e-28!19;UBERON:0006925!3.69e-28!19;UBERON:0008836!3.69e-28!19;UBERON:0009497!6.78e-26!25;UBERON:0000015!6.78e-26!25;UBERON:0002423!6.78e-26!25;UBERON:0006235!6.78e-26!25;UBERON:0004161!6.78e-26!25;UBERON:0005057!9.84e-25!26;UBERON:0008835!3.99e-24!22;UBERON:0003894!3.99e-24!22;UBERON:0009854!5.15e-23!23;UBERON:0007499!4.66e-21!25;UBERON:0009856!3.42e-20!26;UBERON:0005172!2.55e-18!55;UBERON:0005173!2.55e-18!55;UBERON:0002365!1.06e-16!31;UBERON:0002330!1.06e-16!31;UBERON:0002417!2.85e-16!61;UBERON:0000916!2.85e-16!61;UBERON:0003929!5.17e-16!54;UBERON:0002368!1.26e-14!35;UBERON:0000949!1.22e-13!45;UBERON:0002530!5.90e-10!59;UBERON:0005911!8.92e-10!82;UBERON:0005177!1.15e-09!107;UBERON:0002146!4.71e-08!1;UBERON:0005623!4.71e-08!1;UBERON:0001301!8.69e-08!1;UBERON:0009569!1.19e-07!113;UBERON:0007190!1.21e-07!1;UBERON:0004921!1.54e-07!129;UBERON:0004185!1.54e-07!129;UBERON:0000077!1.60e-07!130;UBERON:0001007!7.52e-07!155;UBERON:0001555!7.52e-07!155;UBERON:0007026!7.52e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.26e-44;19!UBERON:0006925;3.26e-44;19!UBERON:0002423;1.81e-33;25!UBERON:0002365;7.18e-26;31!UBERON:0002330;7.18e-26;31!UBERON:0002368;8.23e-23;33!UBERON:0000949;5.78e-20;43!UBERON:0001007;1.22e-10;81!UBERON:0005172;4.94e-10;52!UBERON:0005173;4.94e-10;52!UBERON:0002417;7.93e-09;58!UBERON:0000916;7.93e-09;58!UBERON:0002530;1.00e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.26e-44,19;UBERON:0006925,3.26e-44,19;UBERON:0008836,3.26e-44,19;UBERON:0008835,4.13e-38,22;UBERON:0003894,4.13e-38,22;UBERON:0009854,1.98e-36,23;UBERON:0007499,1.81e-33,25;UBERON:0009497,1.81e-33,25;UBERON:0000015,1.81e-33,25;UBERON:0002423,1.81e-33,25;UBERON:0006235,1.81e-33,25;UBERON:0004161,1.81e-33,25;UBERON:0009856,3.69e-32,26;UBERON:0002365,7.10e-27,31;UBERON:0002330,7.10e-27,31;UBERON:0002368,9.90e-24,35;UBERON:0000949,4.78e-23,45;UBERON:0003929,4.43e-19,54;UBERON:0005172,3.88e-15,54;UBERON:0005173,3.88e-15,54;UBERON:0002530,8.59e-14,59;UBERON:0002417,1.50e-13,60;UBERON:0000916,1.50e-13,60;UBERON:0005911,3.01e-12,82;UBERON:0004921,4.59e-10,118;UBERON:0005177,9.49e-10,101;UBERON:0001041,4.21e-09,87;UBERON:0001007,5.56e-08,145;UBERON:0001555,5.56e-08,145;UBERON:0007026,5.56e-08,145;UBERON:0004119,4.01e-07,160;UBERON:0000925,4.01e-07,160;UBERON:0006595,4.01e-07,160;UBERON:0009569,6.95e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,370.124701679746,107.128166617861,76.2118979619011,0,4.5505722260952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.0864873747123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.7857596253072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0.199679000498991,0.858452096273142,0,0,0,0,16.3081187375953,15.0821020837535,13.5481123146912,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,112.259010997411,68.9035822343551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p6@ALB | |||
}} |
Revision as of 11:35, 13 September 2013
Short description: | p6@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -426bp_to_ENST00000486939_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.93e-40 | 12 |
endodermal cell | 9.87e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.26e-44 | 19 |
digestive gland | 3.26e-44 | 19 |
liver bud | 3.26e-44 | 19 |
hepatic diverticulum | 4.13e-38 | 22 |
liver primordium | 4.13e-38 | 22 |
digestive tract diverticulum | 1.98e-36 | 23 |
epithelial sac | 1.81e-33 | 25 |
epithelium of foregut-midgut junction | 1.81e-33 | 25 |
anatomical boundary | 1.81e-33 | 25 |
hepatobiliary system | 1.81e-33 | 25 |
foregut-midgut junction | 1.81e-33 | 25 |
septum transversum | 1.81e-33 | 25 |
sac | 3.69e-32 | 26 |
exocrine gland | 7.10e-27 | 31 |
exocrine system | 7.10e-27 | 31 |
endocrine gland | 9.90e-24 | 35 |
endocrine system | 4.78e-23 | 45 |
gut epithelium | 4.43e-19 | 54 |
abdomen element | 3.88e-15 | 54 |
abdominal segment element | 3.88e-15 | 54 |
gland | 8.59e-14 | 59 |
abdominal segment of trunk | 1.50e-13 | 60 |
abdomen | 1.50e-13 | 60 |
endo-epithelium | 3.01e-12 | 82 |
subdivision of digestive tract | 4.59e-10 | 118 |
trunk region element | 9.49e-10 | 101 |
foregut | 4.21e-09 | 87 |
digestive system | 5.56e-08 | 145 |
digestive tract | 5.56e-08 | 145 |
primitive gut | 5.56e-08 | 145 |
endoderm-derived structure | 4.01e-07 | 160 |
endoderm | 4.01e-07 | 160 |
presumptive endoderm | 4.01e-07 | 160 |
subdivision of trunk | 6.95e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.