FFCP PHASE1:Mm9::chr15:96468637..96468653,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=31|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:96468637..96468653,-|id=chr15:96468637..96468653,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,3.98e-23,3;CL:0000351,3.98e-23,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.69e-23,3;UBERON:0000478,1.69e-23,3;UBERON:0000158,1.69e-23,3;UBERON:0000358,3.98e-23,3;UBERON:0000307,3.98e-23,3;UBERON:0007010,3.98e-23,3;UBERON:0001987,2.44e-16,2;UBERON:0003124,2.44e-16,2;UBERON:0004340,2.44e-16,2;UBERON:0000305,7.41e-09,1;UBERON:0005795,1.25e-08,4;UBERON:0000995,1.25e-08,4;UBERON:0003975,4.52e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.774739940649458,1.68946466582,1.17032263160997,0,0,0.342401459862411,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,0,0.335565212115473,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0,0,2.71914464507811,0,0,0,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.239630249011841,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0.22237804384487,0,0,0.494096864172033,1.00534083520108,0.596869416123452,0.38992817423824,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,1.08781136763742,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,5.63212099352905,16.522901527378,0.220528398054962,0.16488625294148,0.807322133479528,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0.419854356970974,0.829199842826543,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0,2.66383144048878,2.6017018416748,6.04384618910682,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.347652977834566,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0.407412341537585,0,0,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.429742108096597,0.956441660344217,0.220591419119515,0|short_description=p@chr15:96468637..96468653,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:96468637..96468653,- | |||
|id=chr15:96468637..96468653,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.98e-23,3;CL:0000351,3.98e-23,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.69e-23,3;UBERON:0000478,1.69e-23,3;UBERON:0000158,1.69e-23,3;UBERON:0000358,3.98e-23,3;UBERON:0000307,3.98e-23,3;UBERON:0007010,3.98e-23,3;UBERON:0001987,2.44e-16,2;UBERON:0003124,2.44e-16,2;UBERON:0004340,2.44e-16,2;UBERON:0000305,7.41e-09,1;UBERON:0005795,1.25e-08,4;UBERON:0000995,1.25e-08,4;UBERON:0003975,4.52e-07,5 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.774739940649458,1.68946466582,1.17032263160997,0,0,0.342401459862411,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839918529752175,0,0.335565212115473,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0,0,2.71914464507811,0,0,0,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.239630249011841,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0.22237804384487,0,0,0.494096864172033,1.00534083520108,0.596869416123452,0.38992817423824,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,1.08781136763742,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,5.63212099352905,16.522901527378,0.220528398054962,0.16488625294148,0.807322133479528,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0.419854356970974,0.829199842826543,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0,2.66383144048878,2.6017018416748,6.04384618910682,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.347652977834566,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0.407412341537585,0,0,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.429742108096597,0.956441660344217,0.220591419119515,0 | |||
|short_description=p@chr15:96468637..96468653,- | |||
}} |
Revision as of 11:42, 13 September 2013
Short description: | p@chr15:96468637..96468653, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:96468637..96468653, - |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.98e-23 | 3 |
trophoblast cell | 3.98e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.69e-23 | 3 |
extraembryonic structure | 1.69e-23 | 3 |
membranous layer | 1.69e-23 | 3 |
blastocyst | 3.98e-23 | 3 |
blastula | 3.98e-23 | 3 |
cleaving embryo | 3.98e-23 | 3 |
placenta | 2.44e-16 | 2 |
chorion | 2.44e-16 | 2 |
allantois | 2.44e-16 | 2 |
amnion | 7.41e-09 | 1 |
embryonic uterus | 1.25e-08 | 4 |
uterus | 1.25e-08 | 4 |
internal female genitalia | 4.52e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.