FFCP PHASE1:Mm9::chr16:11144135..11144174,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=52|UniProt=|association_with_transcript=-43bp_to_ENSMUST00000102303_5end|description=CAGE_peak_1_at_ENSMUST00000102303_5end|id=chr16:11144135..11144174,+|ontology_enrichment_celltype=CL:0000548!2.29e-16!115;CL:0000004!2.29e-16!115;CL:0000255!2.29e-16!115;CL:0002371!9.92e-15!118;CL:0000144!3.81e-13!121;CL:0000012!3.81e-13!121;CL:0002321!9.68e-13!70;CL:0000220!9.68e-13!70;CL:0002319!1.51e-10!43;CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0000055!1.10e-08!50;CL:0000723!3.93e-08!91;CL:0000048!3.93e-08!91;CL:0000540!1.22e-07!33;CL:0000047!1.22e-07!33;CL:0000031!1.22e-07!33;CL:0000404!1.22e-07!33;CL:0000034!1.53e-07!97;CL:0000063!1.96e-07!66;CL:0000219!2.04e-07!54|ontology_enrichment_celltype_v019_2=CL:0002321,9.18e-13,70;CL:0002319,1.48e-10,43;CL:0000221,1.06e-09,44;CL:0000133,1.06e-09,44;CL:0000723,2.97e-08,91;CL:0000048,2.97e-08,91;CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33;CL:0000034,1.30e-07,97;CL:0000219,1.42e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.84e-10!75;UBERON:0001016!9.84e-10!75;UBERON:0001017!1.11e-09!73;UBERON:0005743!1.11e-09!73|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.03e-09,75;UBERON:0001017,1.16e-09,73|phase1_expression=2.7225304007815,7.32848356042658,10.4649825059593,55.0484864578431,42.5761370454395,3.02182689441402,18.6890112476421,7.36002943616985,8.16574588479667,9.59664557920173,2.22583358693156,4.30769658574817,7.19043065711064,5.50748535239684,10.3264026162855,8.90891176515234,24.4846657344851,5.52058789376916,6.58149281307546,14.004858509335,12.246233781754,1.48936426801328,3.91799683708403,7.35965144849671,6.8822784320151,4.59385571292016,3.4460959692726,4.74036711908956,9.69119439227507,2.52030129759931,2.88249663851896,21.5910428976275,3.07532393792285,79.2408405077194,1.1554064790051,1.16364251750945,2.6542016314108,1.67412652294763,0.7813353445238,1.0470474879476,5.29408339227913,5.46436387966757,2.42755176515577,3.14742044938943,2.93993100536592,1.65192076945513,51.6378287269706,5.23260375313072,10.9843091367236,10.8880743481599,12.4587915246573,40.250718022192,5.03347818173209,15.9579671242496,6.72187598284928,1.54355661621568,4.01146815914259,1.03134418455488,5.66486090406874,2.11596391708813,12.0427966666174,14.2314703469035,10.6715375533337,23.3973926493164,5.93319817540185,44.7602472416043,26.0652096151012,15.7529505181837,6.32506635081714,7.1553147315796,7.36137364729837,8.2838785477103,7.06779331045163,5.38959516545798,3.54628242767475,16.5459381589804,3.30347642998166,11.6195477657521,12.4421291937557,3.95658863190582,5.12330804173494,4.68822033501084,11.725685958058,7.87867654044352,13.9046405476897,11.7851434189467,7.54569908235246,7.26957838718672,4.24066682665831,5.2144376473682,12.4641730141721,92.0653548370083,40.1183086887573,25.9057531986152,81.8718285984063,22.4013443548668,3.37066608316204,2.21559419351475,16.8860902991865,14.8402621294343,0.563373679106722,53.8971205140135,501.966322222092,711.066703153331,16.8863011988747,10.6411143499541,15.6712577954583,17.4701335970162,8.80388804400384,4.15637989381509,1.73485326766136,2.43572382649713,2.53677046981664,2.11011696773672,3.52766121407114,4.27266410520897,1.97755974187499,9.10975948595443,9.73071607144862,2.26473589926373,2.65009822152472,5.81850303762267,5.59175283654366,1.75668478206928,5.23616767033638,17.3710797541842,0.239630249011841,0.599902730993408,1.01656181658452,5.39246301857362,1.37250180845588,2.01046963380583,6.43149984711423,1.27857728665165,0.83115217823824,4.54275536589721,2.85150218780886,3.4833951770826,3.53811861807145,4.20883711772948,0.650602214813519,1.60931473103431,1.98068342785884,2.10986744970001,3.06164246180975,0.640568601424249,2.52994656311268,7.24369438069244,1.07783996466421,1.32374256117473,0.879755620819744,3.72632745126877,2.50242524303038,0.348252166522167,2.26360350048738,1.39323986772945,0,0,0.284163499395593,1.03562886267751,4.69052119962192,2.70093092191522,3.31442629819294,1.37734962223183,2.62254091908543,0.232533944750408,1.07309360559848,2.45207218971056,2.96207729844265,3.61168420974009,2.99954595319666,2.92399974850665,4.83010253640311,8.32079796314305,5.04695876553905,4.21908910755066,45.5977920517641,13.4869788998408,1.49301775374664,0.928946687441754,0.515469845288373,3.02525286935014,0.889512175379481,1.90225626112559,55.0453711391634,4.11747386810027,1.25667604400135,3.38226002469956,4.28920991662064,52.1315257019448,10.1584883441106,7.96565093017469,1.70701110857774,2.05647322697512,3.38123207019241,1.01825663922657,0.775809948670503,2.17421041659988,2.33975187359752,3.39503340353085,4.23896565171712,2.96153193412321,15.7119892356189,1.16791574001266,0.589676985339609,0,2.84004169943904,1.68824011826692,1.2731292589071,1.15078454980324,4.37765112292595,3.56929837144506,23.0029130443767,7.07067800570156,9.98520553966594,3.78868316920668,6.45830688678884,4.82443521363367,8.1291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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt= | |||
|association_with_transcript=-43bp_to_ENSMUST00000102303_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000102303_5end | |||
|id=chr16:11144135..11144174,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.29e-16!115;CL:0000004!2.29e-16!115;CL:0000255!2.29e-16!115;CL:0002371!9.92e-15!118;CL:0000144!3.81e-13!121;CL:0000012!3.81e-13!121;CL:0002321!9.68e-13!70;CL:0000220!9.68e-13!70;CL:0002319!1.51e-10!43;CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0000055!1.10e-08!50;CL:0000723!3.93e-08!91;CL:0000048!3.93e-08!91;CL:0000540!1.22e-07!33;CL:0000047!1.22e-07!33;CL:0000031!1.22e-07!33;CL:0000404!1.22e-07!33;CL:0000034!1.53e-07!97;CL:0000063!1.96e-07!66;CL:0000219!2.04e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.18e-13,70;CL:0002319,1.48e-10,43;CL:0000221,1.06e-09,44;CL:0000133,1.06e-09,44;CL:0000723,2.97e-08,91;CL:0000048,2.97e-08,91;CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33;CL:0000034,1.30e-07,97;CL:0000219,1.42e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.84e-10!75;UBERON:0001016!9.84e-10!75;UBERON:0001017!1.11e-09!73;UBERON:0005743!1.11e-09!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.03e-09,75;UBERON:0001017,1.16e-09,73 | |||
|phase1_expression=2.7225304007815,7.32848356042658,10.4649825059593,55.0484864578431,42.5761370454395,3.02182689441402,18.6890112476421,7.36002943616985,8.16574588479667,9.59664557920173,2.22583358693156,4.30769658574817,7.19043065711064,5.50748535239684,10.3264026162855,8.90891176515234,24.4846657344851,5.52058789376916,6.58149281307546,14.004858509335,12.246233781754,1.48936426801328,3.91799683708403,7.35965144849671,6.8822784320151,4.59385571292016,3.4460959692726,4.74036711908956,9.69119439227507,2.52030129759931,2.88249663851896,21.5910428976275,3.07532393792285,79.2408405077194,1.1554064790051,1.16364251750945,2.6542016314108,1.67412652294763,0.7813353445238,1.0470474879476,5.29408339227913,5.46436387966757,2.42755176515577,3.14742044938943,2.93993100536592,1.65192076945513,51.6378287269706,5.23260375313072,10.9843091367236,10.8880743481599,12.4587915246573,40.250718022192,5.03347818173209,15.9579671242496,6.72187598284928,1.54355661621568,4.01146815914259,1.03134418455488,5.66486090406874,2.11596391708813,12.0427966666174,14.2314703469035,10.6715375533337,23.3973926493164,5.93319817540185,44.7602472416043,26.0652096151012,15.7529505181837,6.32506635081714,7.1553147315796,7.36137364729837,8.2838785477103,7.06779331045163,5.38959516545798,3.54628242767475,16.5459381589804,3.30347642998166,11.6195477657521,12.4421291937557,3.95658863190582,5.12330804173494,4.68822033501084,11.725685958058,7.87867654044352,13.9046405476897,11.7851434189467,7.54569908235246,7.26957838718672,4.24066682665831,5.2144376473682,12.4641730141721,92.0653548370083,40.1183086887573,25.9057531986152,81.8718285984063,22.4013443548668,3.37066608316204,2.21559419351475,16.8860902991865,14.8402621294343,0.563373679106722,53.8971205140135,501.966322222092,711.066703153331,16.8863011988747,10.6411143499541,15.6712577954583,17.4701335970162,8.80388804400384,4.15637989381509,1.73485326766136,2.43572382649713,2.53677046981664,2.11011696773672,3.52766121407114,4.27266410520897,1.97755974187499,9.10975948595443,9.73071607144862,2.26473589926373,2.65009822152472,5.81850303762267,5.59175283654366,1.75668478206928,5.23616767033638,17.3710797541842,0.239630249011841,0.599902730993408,1.01656181658452,5.39246301857362,1.37250180845588,2.01046963380583,6.43149984711423,1.27857728665165,0.83115217823824,4.54275536589721,2.85150218780886,3.4833951770826,3.53811861807145,4.20883711772948,0.650602214813519,1.60931473103431,1.98068342785884,2.10986744970001,3.06164246180975,0.640568601424249,2.52994656311268,7.24369438069244,1.07783996466421,1.32374256117473,0.879755620819744,3.72632745126877,2.50242524303038,0.348252166522167,2.26360350048738,1.39323986772945,0,0,0.284163499395593,1.03562886267751,4.69052119962192,2.70093092191522,3.31442629819294,1.37734962223183,2.62254091908543,0.232533944750408,1.07309360559848,2.45207218971056,2.96207729844265,3.61168420974009,2.99954595319666,2.92399974850665,4.83010253640311,8.32079796314305,5.04695876553905,4.21908910755066,45.5977920517641,13.4869788998408,1.49301775374664,0.928946687441754,0.515469845288373,3.02525286935014,0.889512175379481,1.90225626112559,55.0453711391634,4.11747386810027,1.25667604400135,3.38226002469956,4.28920991662064,52.1315257019448,10.1584883441106,7.96565093017469,1.70701110857774,2.05647322697512,3.38123207019241,1.01825663922657,0.775809948670503,2.17421041659988,2.33975187359752,3.39503340353085,4.23896565171712,2.96153193412321,15.7119892356189,1.16791574001266,0.589676985339609,0,2.84004169943904,1.68824011826692,1.2731292589071,1.15078454980324,4.37765112292595,3.56929837144506,23.0029130443767,7.07067800570156,9.98520553966594,3.78868316920668,6.45830688678884,4.82443521363367,8.12914036733061,1.70542270593436,1.46668478797823,6.62005834523234,0.938760993154008,0.670025029767263,2.38043640886014,4.68320754858717,1.41871629695572,5.53661724121937,4.30527875375215,6.06294264448231,4.83517949224508,5.20736610893442,67.8560777726725,154.469214204514,0.491764273019036,1.65562047782839,1.76605648986571,6.09500770279457,6.06559297893699,7.32165688892682,28.0802315280468,38.2629969410706,21.5423397732799,16.4888470587261,18.9378872970035,23.2122755246843,20.6453457854196,18.704374906324,16.2067988958075,3.21321316421807,0.851640511249612,3.20518086601059,2.28041743095006,5.1140738121486,19.9117707509944,4.37005145078967,1.51161778482376,1.69744571780308,4.13422650033082,5.22639751504677,8.01127708821486,11.2695456138027,9.62542921638748,5.37262488490887,7.37930260024991,14.4389760547462,3.74483566329167,1.44048875225048,2.58717367565509,2.35770738534752,1.59606210278046,4.10248280484762,3.45552943264454,14.9187825066154,0.938686832254841,2.1183207086382,9.04166432025344,8.73897140589844,4.84393280087717,1.68876189798836,2.02932984805332,2.1338316966858,39.3499129450298,3.52308073819968,8.88528580148834,0.619160603889667,1.29636169158798,3.01389531207506,2.1871076435364,2.0590035588587,1.18984900995699,0.979660166265606,1.10559979043539,0,1.58167996790568,1.82987520414164,2.26811215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| |||
|short_description=p1@ENSMUST00000102303 | |||
}} |
Revision as of 11:57, 13 September 2013
Short description: | p1@ENSMUST00000102303 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000102303_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | -43bp_to_ENSMUST00000102303_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.18e-13 | 70 |
neural cell | 1.48e-10 | 43 |
ectodermal cell | 1.06e-09 | 44 |
neurectodermal cell | 1.06e-09 | 44 |
somatic stem cell | 2.97e-08 | 91 |
multi fate stem cell | 2.97e-08 | 91 |
neuron | 1.21e-07 | 33 |
neuronal stem cell | 1.21e-07 | 33 |
neuroblast | 1.21e-07 | 33 |
electrically signaling cell | 1.21e-07 | 33 |
stem cell | 1.30e-07 | 97 |
motile cell | 1.42e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.03e-09 | 75 |
central nervous system | 1.16e-09 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.